RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 PIP4K2AP48426 406 aaPredicted RBP6.12□□□□□ -1.43
HERC3-213ENST00000598772 FKBP1BP68106 108 aa6.12□□□□□ -1.43
HERC3-213ENST00000598772 PTPN12Q05209 780 aaKnown RBP6.12□□□□□ -1.43
HERC3-213ENST00000598772 KIF4BQ2VIQ3 1234 aa6.12□□□□□ -1.43
HERC3-213ENST00000598772 ZNF831Q5JPB2 1677 aa6.12□□□□□ -1.43
HERC3-213ENST00000598772 ANGEL2Q5VTE6 544 aaKnown RBP6.12□□□□□ -1.43
HERC3-213ENST00000598772 DZIP3Q86Y13 1208 aaKnown RBP6.12□□□□□ -1.43
HERC3-213ENST00000598772 IFNL1Q8IU54 200 aa6.12□□□□□ -1.43
HERC3-213ENST00000598772 SUPT20HQ8NEM7 779 aa6.12□□□□□ -1.43
HERC3-213ENST00000598772 TONSLQ96HA7 1378 aa6.12□□□□□ -1.43
HERC3-213ENST00000598772 UBE2OQ9C0C9 1292 aaKnown RBP6.12□□□□□ -1.43
HERC3-213ENST00000598772 LAMA2P24043 3122 aaKnown RBP6.12□□□□□ -1.43
HERC3-213ENST00000598772 BCORQ6W2J9 1755 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 RBBP6Q7Z6E9 1792 aaKnown RBP6.11□□□□□ -1.43
HERC3-213ENST00000598772 CDHR2Q9BYE9 1310 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 PSMD14O00487 310 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 CAP1Q01518 475 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 CRHR2Q13324 411 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 SCARF1Q14162 830 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 LRIT3Q3SXY7 679 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 GRIPAP1Q4V328 841 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 TJAP1Q5JTD0 557 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 OTUD7BQ6GQQ9 843 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 DPP8Q6V1X1 898 aaPredicted RBP6.11□□□□□ -1.43
HERC3-213ENST00000598772 C7orf61Q8IZ16 206 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 TDHQ8IZJ6 230 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 NKX2-3Q8TAU0 364 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 SHISA4Q96DD7 197 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 SLC10A4Q96EP9 437 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 RBM17Q96I25 401 aaKnown RBP6.11□□□□□ -1.43
HERC3-213ENST00000598772 CDX2Q99626 313 aaPredicted RBP6.11□□□□□ -1.43
HERC3-213ENST00000598772 CFHR5Q9BXR6 569 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 RNF208Q9H0X6 261 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 EYSQ5T1H1 3165 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 LAMB4A4D0S4 1761 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 TJP1Q07157 1748 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 ANKRD26Q9UPS8 1709 aa6.11□□□□□ -1.43
HERC3-213ENST00000598772 KLRG2A4D1S0 409 aaPredicted RBP6.1□□□□□ -1.43
HERC3-213ENST00000598772 MANSC4A6NHS7 340 aaPredicted RBP6.1□□□□□ -1.43
HERC3-213ENST00000598772 RIMBP2O15034 1052 aa6.1□□□□□ -1.43
HERC3-213ENST00000598772 TFRCP02786 760 aaKnown RBP6.1□□□□□ -1.43
HERC3-213ENST00000598772 NF2P35240 595 aa6.1□□□□□ -1.43
HERC3-213ENST00000598772 AMOTQ4VCS5 1084 aa6.1□□□□□ -1.43
HERC3-213ENST00000598772 ZNF697Q5TEC3 545 aa6.1□□□□□ -1.43
HERC3-213ENST00000598772 SPRYD7Q5W111 196 aa6.1□□□□□ -1.43
HERC3-213ENST00000598772 TTC5Q8N0Z6 440 aa6.1□□□□□ -1.43
HERC3-213ENST00000598772 MYLIPQ8WY64 445 aa6.1□□□□□ -1.43
HERC3-213ENST00000598772 DPF2Q92785 391 aa6.1□□□□□ -1.43
HERC3-213ENST00000598772 GDF15Q99988 308 aa6.1□□□□□ -1.43
HERC3-213ENST00000598772 LGR6Q9HBX8 967 aa6.1□□□□□ -1.43
HERC3-213ENST00000598772 ZNF652Q9Y2D9 606 aa6.1□□□□□ -1.43
HERC3-213ENST00000598772 ROCK2O75116 1388 aaKnown RBP6.09□□□□□ -1.43
HERC3-213ENST00000598772 ARFGEF2Q9Y6D5 1785 aa6.09□□□□□ -1.43
HERC3-213ENST00000598772 SYNGAP1Q96PV0 1343 aa6.09□□□□□ -1.43
HERC3-213ENST00000598772 YDJCA8MPS7 323 aa6.09□□□□□ -1.43
HERC3-213ENST00000598772 IGF2BP3O00425 579 aaKnown RBP eCLIP6.09□□□□□ -1.43
HERC3-213ENST00000598772 CCL5P13501 91 aa6.09□□□□□ -1.43
HERC3-213ENST00000598772 BMP8BP34820 402 aa6.09□□□□□ -1.43
HERC3-213ENST00000598772 MAGEA10P43363 369 aaPredicted RBP6.09□□□□□ -1.43
HERC3-213ENST00000598772 INHBEP58166 350 aa6.09□□□□□ -1.43
HERC3-213ENST00000598772 KIF22Q14807 665 aa6.09□□□□□ -1.43
HERC3-213ENST00000598772 ARMC9Q7Z3E5 817 aa6.09□□□□□ -1.43
HERC3-213ENST00000598772 IL27Q8NEV9 243 aa6.09□□□□□ -1.43
HERC3-213ENST00000598772 PPM1EQ8WY54 764 aa6.09□□□□□ -1.43
HERC3-213ENST00000598772 P2RX7Q99572 595 aaKnown RBP6.09□□□□□ -1.43
HERC3-213ENST00000598772 DBNDD1Q9H9R9 158 aa6.09□□□□□ -1.43
HERC3-213ENST00000598772 SLC52A2Q9HAB3 445 aa6.09□□□□□ -1.43
HERC3-213ENST00000598772 KCNQ5Q9NR82 932 aa6.09□□□□□ -1.43
HERC3-213ENST00000598772 RAB3GAP2Q9H2M9 1393 aa6.08□□□□□ -1.44
HERC3-213ENST00000598772 POTEB3A0JP26 581 aa6.08□□□□□ -1.44
HERC3-213ENST00000598772 G3V3G9 751 aa6.08□□□□□ -1.44
HERC3-213ENST00000598772 FOSL2P15408 326 aa6.08□□□□□ -1.44
HERC3-213ENST00000598772 IL6STP40189 918 aaPredicted RBP6.08□□□□□ -1.44
HERC3-213ENST00000598772 GJA8P48165 433 aa6.08□□□□□ -1.44
HERC3-213ENST00000598772 MKRN4PQ13434 485 aaPredicted RBP6.08□□□□□ -1.44
HERC3-213ENST00000598772 EIF4A2Q14240 407 aaKnown RBP6.08□□□□□ -1.44
HERC3-213ENST00000598772 DOK7Q18PE1 504 aa6.08□□□□□ -1.44
HERC3-213ENST00000598772 DCAF8Q5TAQ9 597 aa6.08□□□□□ -1.44
HERC3-213ENST00000598772 POTEBQ6S5H4 581 aa6.08□□□□□ -1.44
HERC3-213ENST00000598772 SLAIN1Q8ND83 568 aa6.08□□□□□ -1.44
HERC3-213ENST00000598772 VPS33BQ9H267 617 aa6.08□□□□□ -1.44
HERC3-213ENST00000598772 ANGEL1Q9UNK9 670 aaKnown RBP6.08□□□□□ -1.44
HERC3-213ENST00000598772 FZD1Q9UP38 647 aa6.08□□□□□ -1.44
HERC3-213ENST00000598772 ZNF609O15014 1411 aa6.08□□□□□ -1.44
HERC3-213ENST00000598772 GJB1P08034 283 aa6.07□□□□□ -1.44
HERC3-213ENST00000598772 MRE11P49959 708 aa6.07□□□□□ -1.44
HERC3-213ENST00000598772 KIAA2012Q0VF49 1180 aa6.07□□□□□ -1.44
HERC3-213ENST00000598772 VSIG10Q8N0Z9 540 aa6.07□□□□□ -1.44
HERC3-213ENST00000598772 NGEFQ8N5V2 710 aa6.07□□□□□ -1.44
HERC3-213ENST00000598772 RAET1EQ8TD07 263 aa6.07□□□□□ -1.44
HERC3-213ENST00000598772 C1QTNF1Q9BXJ1 281 aa6.07□□□□□ -1.44
HERC3-213ENST00000598772 TEX13AQ9BXU3 409 aaPredicted RBP6.07□□□□□ -1.44
HERC3-213ENST00000598772 ARHGAP39Q9C0H5 1083 aa6.07□□□□□ -1.44
HERC3-213ENST00000598772 ATP6V0A2Q9Y487 856 aa6.07□□□□□ -1.44
HERC3-213ENST00000598772 MRC1P22897 1456 aa6.07□□□□□ -1.44
HERC3-213ENST00000598772 MUC6Q6W4X9 2439 aa6.07□□□□□ -1.44
HERC3-213ENST00000598772 BDP1A6H8Y1 2624 aa6.06□□□□□ -1.44
HERC3-213ENST00000598772 C6orf229H3BNL8 230 aa6.06□□□□□ -1.44
HERC3-213ENST00000598772 HOXA10P31260 410 aaPredicted RBP6.06□□□□□ -1.44
HERC3-213ENST00000598772 MDM2Q00987 491 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms