RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 VEGFAP15692 232 aaPredicted RBP22.23■■□□□ 1.15
USHBP1-209ENST00000598570 SCN4AP35499 1836 aa22.22■■□□□ 1.15
USHBP1-209ENST00000598570 DDNO94850 711 aaPredicted RBP22.22■■□□□ 1.15
USHBP1-209ENST00000598570 ATP2B4P23634 1241 aa22.22■■□□□ 1.15
USHBP1-209ENST00000598570 IGHMBP2P38935 993 aaKnown RBP22.22■■□□□ 1.15
USHBP1-209ENST00000598570 WASHC4Q2M389 1173 aa22.22■■□□□ 1.15
USHBP1-209ENST00000598570 BICC1Q9H694 974 aaKnown RBP22.22■■□□□ 1.15
USHBP1-209ENST00000598570 RRAGCQ9HB90 399 aa22.22■■□□□ 1.15
USHBP1-209ENST00000598570 NIM1KQ8IY84 436 aa22.21■■□□□ 1.15
USHBP1-209ENST00000598570 EYA3Q99504 573 aa22.21■■□□□ 1.15
USHBP1-209ENST00000598570 GGA1Q9UJY5 639 aa22.21■■□□□ 1.15
USHBP1-209ENST00000598570 TOMM70O94826 608 aa22.2■■□□□ 1.14
USHBP1-209ENST00000598570 C1QTNF8P60827 252 aa22.2■■□□□ 1.14
USHBP1-209ENST00000598570 ZKSCAN2Q63HK3 967 aa22.2■■□□□ 1.14
USHBP1-209ENST00000598570 C15orf52Q6ZUT6 534 aaKnown RBP22.2■■□□□ 1.14
USHBP1-209ENST00000598570 ANKRD2Q9GZV1 360 aa22.2■■□□□ 1.14
USHBP1-209ENST00000598570 LEMD3Q9Y2U8 911 aa22.2■■□□□ 1.14
USHBP1-209ENST00000598570 IRS2Q9Y4H2 1338 aa22.2■■□□□ 1.14
USHBP1-209ENST00000598570 SPEF2Q9C093 1822 aa22.2■■□□□ 1.14
USHBP1-209ENST00000598570 YDJCA8MPS7 323 aa22.19■■□□□ 1.14
USHBP1-209ENST00000598570 CXCL9Q07325 125 aa22.19■■□□□ 1.14
USHBP1-209ENST00000598570 CCDC57Q2TAC2 916 aa22.19■■□□□ 1.14
USHBP1-209ENST00000598570 ANKIB1Q9P2G1 1089 aa22.19■■□□□ 1.14
USHBP1-209ENST00000598570 A0A1B0GUL6 1792 aa22.18■■□□□ 1.14
USHBP1-209ENST00000598570 WTIPA6NIX2 430 aaPredicted RBP22.18■■□□□ 1.14
USHBP1-209ENST00000598570 C6orf229H3BNL8 230 aa22.18■■□□□ 1.14
USHBP1-209ENST00000598570 RFX5P48382 616 aaPredicted RBP22.18■■□□□ 1.14
USHBP1-209ENST00000598570 EIF6P56537 245 aaKnown RBP22.18■■□□□ 1.14
USHBP1-209ENST00000598570 RBM46Q8TBY0 533 aaKnown RBP22.18■■□□□ 1.14
USHBP1-209ENST00000598570 MPHOSPH8Q99549 860 aa22.18■■□□□ 1.14
USHBP1-209ENST00000598570 HDAC5Q9UQL6 1122 aa22.18■■□□□ 1.14
USHBP1-209ENST00000598570 TNNQ9UQP3 1299 aa22.18■■□□□ 1.14
USHBP1-209ENST00000598570 RIPOR2Q9Y4F9 1068 aa22.18■■□□□ 1.14
USHBP1-209ENST00000598570 ZC3H12CQ9C0D7 883 aaKnown RBP22.17■■□□□ 1.14
USHBP1-209ENST00000598570 ZNF609O15014 1411 aa22.16■■□□□ 1.14
USHBP1-209ENST00000598570 MED23Q9ULK4 1368 aa22.16■■□□□ 1.14
USHBP1-209ENST00000598570 UFL1O94874 794 aa22.16■■□□□ 1.14
USHBP1-209ENST00000598570 CHRNDQ07001 517 aa22.16■■□□□ 1.14
USHBP1-209ENST00000598570 MTX1Q13505 466 aa22.16■■□□□ 1.14
USHBP1-209ENST00000598570 IQCA1LA6NCM1 817 aa22.15■■□□□ 1.14
USHBP1-209ENST00000598570 GNAI3P08754 354 aa22.15■■□□□ 1.14
USHBP1-209ENST00000598570 UBTFL1P0CB47 393 aaPredicted RBP22.15■■□□□ 1.14
USHBP1-209ENST00000598570 LDHAL6AQ6ZMR3 332 aa22.15■■□□□ 1.14
USHBP1-209ENST00000598570 FRAT1Q92837 279 aaPredicted RBP22.15■■□□□ 1.14
USHBP1-209ENST00000598570 ZNF594Q96JF6 807 aaPredicted RBP22.15■■□□□ 1.14
USHBP1-209ENST00000598570 MEIS3Q99687 375 aa22.15■■□□□ 1.14
USHBP1-209ENST00000598570 SCN9AQ15858 1988 aa22.15■■□□□ 1.14
USHBP1-209ENST00000598570 SCNN1DP51172 638 aa22.14■■□□□ 1.13
USHBP1-209ENST00000598570 TNIP1Q15025 636 aa22.14■■□□□ 1.13
USHBP1-209ENST00000598570 TAF1DQ9H5J8 278 aaPredicted RBP22.14■■□□□ 1.13
USHBP1-209ENST00000598570 PSME4Q14997 1843 aa22.14■■□□□ 1.13
USHBP1-209ENST00000598570 ZNF804BA4D1E1 1349 aa22.13■■□□□ 1.13
USHBP1-209ENST00000598570 ADAMTSL1Q8N6G6 1762 aa22.13■■□□□ 1.13
USHBP1-209ENST00000598570 FSTL1Q12841 308 aa22.13■■□□□ 1.13
USHBP1-209ENST00000598570 CIAPIN1Q6FI81 312 aa22.13■■□□□ 1.13
USHBP1-209ENST00000598570 PODNQ7Z5L7 613 aa22.13■■□□□ 1.13
USHBP1-209ENST00000598570 TMEM57Q8N5G2 664 aa22.13■■□□□ 1.13
USHBP1-209ENST00000598570 FBXO3Q9UK99 471 aa22.13■■□□□ 1.13
USHBP1-209ENST00000598570 ECE2O60344 883 aa22.12■■□□□ 1.13
USHBP1-209ENST00000598570 VIL1P09327 827 aaKnown RBP22.12■■□□□ 1.13
USHBP1-209ENST00000598570 RLBP1P12271 317 aa22.12■■□□□ 1.13
USHBP1-209ENST00000598570 TXNRD3Q86VQ6 643 aa22.12■■□□□ 1.13
USHBP1-209ENST00000598570 DZIP1LQ8IYY4 767 aaKnown RBP22.12■■□□□ 1.13
USHBP1-209ENST00000598570 DPF2Q92785 391 aa22.12■■□□□ 1.13
USHBP1-209ENST00000598570 GPR101Q96P66 508 aaPredicted RBP22.12■■□□□ 1.13
USHBP1-209ENST00000598570 RIMBP2O15034 1052 aa22.11■■□□□ 1.13
USHBP1-209ENST00000598570 PTPN12Q05209 780 aaKnown RBP22.11■■□□□ 1.13
USHBP1-209ENST00000598570 VGLL2Q8N8G2 317 aa22.11■■□□□ 1.13
USHBP1-209ENST00000598570 PUS3Q9BZE2 481 aaKnown RBP22.11■■□□□ 1.13
USHBP1-209ENST00000598570 KCNQ5Q9NR82 932 aa22.11■■□□□ 1.13
USHBP1-209ENST00000598570 HACL1Q9UJ83 578 aa22.11■■□□□ 1.13
USHBP1-209ENST00000598570 RCAN3Q9UKA8 241 aa22.11■■□□□ 1.13
USHBP1-209ENST00000598570 CHMP3Q9Y3E7 222 aa22.11■■□□□ 1.13
USHBP1-209ENST00000598570 ZNF646O15015 1829 aaPredicted RBP22.1■■□□□ 1.13
USHBP1-209ENST00000598570 MROH5Q6ZUA9 1318 aa22.1■■□□□ 1.13
USHBP1-209ENST00000598570 ZBTB7BO15156 539 aaPredicted RBP22.1■■□□□ 1.13
USHBP1-209ENST00000598570 COA1Q9GZY4 146 aa22.1■■□□□ 1.13
USHBP1-209ENST00000598570 DBNDD1Q9H9R9 158 aa22.1■■□□□ 1.13
USHBP1-209ENST00000598570 GPRC5DQ9NZD1 345 aa22.1■■□□□ 1.13
USHBP1-209ENST00000598570 LRRFIP2Q9Y608 721 aaKnown RBP22.1■■□□□ 1.13
USHBP1-209ENST00000598570 RAD17O75943 681 aa22.09■■□□□ 1.13
USHBP1-209ENST00000598570 UBE4AQ14139 1066 aa22.09■■□□□ 1.13
USHBP1-209ENST00000598570 DOK7Q18PE1 504 aa22.09■■□□□ 1.13
USHBP1-209ENST00000598570 CLUAP1Q96AJ1 413 aa22.09■■□□□ 1.13
USHBP1-209ENST00000598570 GMLQ99445 158 aa22.09■■□□□ 1.13
USHBP1-209ENST00000598570 COPRSQ9NQ92 184 aa22.09■■□□□ 1.13
USHBP1-209ENST00000598570 PSMD14O00487 310 aa22.08■■□□□ 1.13
USHBP1-209ENST00000598570 CIAO1O76071 339 aa22.08■■□□□ 1.13
USHBP1-209ENST00000598570 RPS12P25398 132 aaKnown RBP22.08■■□□□ 1.13
USHBP1-209ENST00000598570 EPHX2P34913 555 aa22.08■■□□□ 1.13
USHBP1-209ENST00000598570 ATG9AQ7Z3C6 839 aa22.08■■□□□ 1.13
USHBP1-209ENST00000598570 PNMA8AQ86V59 439 aaPredicted RBP22.08■■□□□ 1.13
USHBP1-209ENST00000598570 CNNM1Q9NRU3 951 aa22.08■■□□□ 1.13
USHBP1-209ENST00000598570 TAF5LO75529 589 aa22.07■■□□□ 1.12
USHBP1-209ENST00000598570 GMPSP49915 693 aaPredicted RBP22.07■■□□□ 1.12
USHBP1-209ENST00000598570 LRRC24Q50LG9 513 aa22.07■■□□□ 1.12
USHBP1-209ENST00000598570 TAF7LQ5H9L4 462 aa22.07■■□□□ 1.12
USHBP1-209ENST00000598570 SMC1BQ8NDV3 1235 aa22.07■■□□□ 1.12
USHBP1-209ENST00000598570 HELBQ8NG08 1087 aaPredicted RBP22.07■■□□□ 1.12
USHBP1-209ENST00000598570 PGAP2Q9UHJ9 254 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms