RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 IGHMBP2P38935 993 aaKnown RBP28.78■■■□□ 2.2
IRF3-220ENST00000598108 C16orf71Q8IYS4 520 aaPredicted RBP28.78■■■□□ 2.2
IRF3-220ENST00000598108 GPC2Q8N158 579 aa28.78■■■□□ 2.2
IRF3-220ENST00000598108 GGA1Q9UJY5 639 aa28.78■■■□□ 2.2
IRF3-220ENST00000598108 CXCL9Q07325 125 aa28.77■■■□□ 2.2
IRF3-220ENST00000598108 IFIT5Q13325 482 aaKnown RBP28.77■■■□□ 2.2
IRF3-220ENST00000598108 ARHGAP45Q92619 1136 aa28.77■■■□□ 2.2
IRF3-220ENST00000598108 GJA3Q9Y6H8 435 aa28.77■■■□□ 2.2
IRF3-220ENST00000598108 YDJCA8MPS7 323 aa28.76■■■□□ 2.19
IRF3-220ENST00000598108 XDHP47989 1333 aa28.75■■■□□ 2.19
IRF3-220ENST00000598108 KIF16BQ96L93 1317 aa28.75■■■□□ 2.19
IRF3-220ENST00000598108 CCT4P50991 539 aaKnown RBP28.75■■■□□ 2.19
IRF3-220ENST00000598108 RBM46Q8TBY0 533 aaKnown RBP28.75■■■□□ 2.19
IRF3-220ENST00000598108 EYA3Q99504 573 aa28.75■■■□□ 2.19
IRF3-220ENST00000598108 MPHOSPH8Q99549 860 aa28.75■■■□□ 2.19
IRF3-220ENST00000598108 BICC1Q9H694 974 aaKnown RBP28.75■■■□□ 2.19
IRF3-220ENST00000598108 TNNQ9UQP3 1299 aa28.75■■■□□ 2.19
IRF3-220ENST00000598108 WDR90Q96KV7 1748 aa28.74■■■□□ 2.19
IRF3-220ENST00000598108 DOK7Q18PE1 504 aa28.74■■■□□ 2.19
IRF3-220ENST00000598108 ANKRD44Q8N8A2 993 aa28.74■■■□□ 2.19
IRF3-220ENST00000598108 ZNF594Q96JF6 807 aaPredicted RBP28.74■■■□□ 2.19
IRF3-220ENST00000598108 DBNDD1Q9H9R9 158 aa28.74■■■□□ 2.19
IRF3-220ENST00000598108 RAD17O75943 681 aa28.73■■■□□ 2.19
IRF3-220ENST00000598108 ATP2B4P23634 1241 aa28.73■■■□□ 2.19
IRF3-220ENST00000598108 RABL6Q3YEC7 729 aaPredicted RBP28.73■■■□□ 2.19
IRF3-220ENST00000598108 FRAT1Q92837 279 aaPredicted RBP28.73■■■□□ 2.19
IRF3-220ENST00000598108 ZC3H12CQ9C0D7 883 aaKnown RBP28.73■■■□□ 2.19
IRF3-220ENST00000598108 LTBP1Q14766 1721 aa28.72■■■□□ 2.19
IRF3-220ENST00000598108 CCDC57Q2TAC2 916 aa28.72■■■□□ 2.19
IRF3-220ENST00000598108 TAF1DQ9H5J8 278 aaPredicted RBP28.72■■■□□ 2.19
IRF3-220ENST00000598108 MYH3P11055 1940 aa28.71■■■□□ 2.19
IRF3-220ENST00000598108 IQCA1LA6NCM1 817 aa28.71■■■□□ 2.19
IRF3-220ENST00000598108 IPO8O15397 1037 aaKnown RBP28.71■■■□□ 2.19
IRF3-220ENST00000598108 TRIM27P14373 513 aa28.71■■■□□ 2.19
IRF3-220ENST00000598108 KCNQ5Q9NR82 932 aa28.71■■■□□ 2.19
IRF3-220ENST00000598108 POTEIP0CG38 1075 aa28.7■■■□□ 2.18
IRF3-220ENST00000598108 POTEJP0CG39 1038 aa28.7■■■□□ 2.18
IRF3-220ENST00000598108 CHRNDQ07001 517 aa28.7■■■□□ 2.18
IRF3-220ENST00000598108 HACL1Q9UJ83 578 aa28.7■■■□□ 2.18
IRF3-220ENST00000598108 SCNN1DP51172 638 aa28.69■■■□□ 2.18
IRF3-220ENST00000598108 INTS3Q68E01 1043 aaKnown RBP28.69■■■□□ 2.18
IRF3-220ENST00000598108 CIAPIN1Q6FI81 312 aa28.69■■■□□ 2.18
IRF3-220ENST00000598108 ATF7IPQ6VMQ6 1270 aa28.69■■■□□ 2.18
IRF3-220ENST00000598108 ECE2O60344 883 aa28.68■■■□□ 2.18
IRF3-220ENST00000598108 TAF7LQ5H9L4 462 aa28.68■■■□□ 2.18
IRF3-220ENST00000598108 HELBQ8NG08 1087 aaPredicted RBP28.68■■■□□ 2.18
IRF3-220ENST00000598108 ANKRD2Q9GZV1 360 aa28.68■■■□□ 2.18
IRF3-220ENST00000598108 EPHX2P34913 555 aa28.67■■■□□ 2.18
IRF3-220ENST00000598108 EPS15P42566 896 aa28.67■■■□□ 2.18
IRF3-220ENST00000598108 LDHAL6AQ6ZMR3 332 aa28.67■■■□□ 2.18
IRF3-220ENST00000598108 LEMD3Q9Y2U8 911 aa28.67■■■□□ 2.18
IRF3-220ENST00000598108 SNAP23O00161 211 aa28.66■■■□□ 2.18
IRF3-220ENST00000598108 FSTL1Q12841 308 aa28.66■■■□□ 2.18
IRF3-220ENST00000598108 TNIP1Q15025 636 aa28.66■■■□□ 2.18
IRF3-220ENST00000598108 SMC1BQ8NDV3 1235 aa28.66■■■□□ 2.18
IRF3-220ENST00000598108 CLUAP1Q96AJ1 413 aa28.66■■■□□ 2.18
IRF3-220ENST00000598108 TAF5LO75529 589 aa28.65■■■□□ 2.18
IRF3-220ENST00000598108 GMPSP49915 693 aaPredicted RBP28.65■■■□□ 2.18
IRF3-220ENST00000598108 TXNRD3Q86VQ6 643 aa28.65■■■□□ 2.18
IRF3-220ENST00000598108 MEIS3Q99687 375 aa28.65■■■□□ 2.18
IRF3-220ENST00000598108 PUS3Q9BZE2 481 aaKnown RBP28.65■■■□□ 2.18
IRF3-220ENST00000598108 PSMD14O00487 310 aa28.64■■■□□ 2.18
IRF3-220ENST00000598108 UBTFL1P0CB47 393 aaPredicted RBP28.64■■■□□ 2.18
IRF3-220ENST00000598108 KLRK1P26718 216 aa28.64■■■□□ 2.18
IRF3-220ENST00000598108 ZKSCAN2Q63HK3 967 aa28.64■■■□□ 2.18
IRF3-220ENST00000598108 ZNF804BA4D1E1 1349 aa28.64■■■□□ 2.17
IRF3-220ENST00000598108 G3V3G9 751 aa28.63■■■□□ 2.17
IRF3-220ENST00000598108 HSPA6P17066 643 aa28.63■■■□□ 2.17
IRF3-220ENST00000598108 DCAF8Q5TAQ9 597 aa28.63■■■□□ 2.17
IRF3-220ENST00000598108 CNNM1Q9NRU3 951 aa28.63■■■□□ 2.17
IRF3-220ENST00000598108 GPRC5DQ9NZD1 345 aa28.63■■■□□ 2.17
IRF3-220ENST00000598108 ZBTB12Q9Y330 459 aaPredicted RBP28.63■■■□□ 2.17
IRF3-220ENST00000598108 LMOD1P29536 600 aaPredicted RBP28.62■■■□□ 2.17
IRF3-220ENST00000598108 EAPPQ56P03 285 aaPredicted RBP28.62■■■□□ 2.17
IRF3-220ENST00000598108 KLHDC4Q8TBB5 520 aa28.62■■■□□ 2.17
IRF3-220ENST00000598108 MED23Q9ULK4 1368 aa28.62■■■□□ 2.17
IRF3-220ENST00000598108 RIPOR2Q9Y4F9 1068 aa28.61■■■□□ 2.17
IRF3-220ENST00000598108 LRRFIP2Q9Y608 721 aaKnown RBP28.61■■■□□ 2.17
IRF3-220ENST00000598108 SHTN1A0MZ66 631 aa28.6■■■□□ 2.17
IRF3-220ENST00000598108 PLIN1O60240 522 aa28.6■■■□□ 2.17
IRF3-220ENST00000598108 CHADLQ6NUI6 762 aa28.6■■■□□ 2.17
IRF3-220ENST00000598108 LDHDQ86WU2 507 aa28.6■■■□□ 2.17
IRF3-220ENST00000598108 SPEF2Q9C093 1822 aa28.59■■■□□ 2.17
IRF3-220ENST00000598108 KCNJ4P48050 445 aa28.59■■■□□ 2.17
IRF3-220ENST00000598108 RFX5P48382 616 aaPredicted RBP28.59■■■□□ 2.17
IRF3-220ENST00000598108 LRRC24Q50LG9 513 aa28.59■■■□□ 2.17
IRF3-220ENST00000598108 PNMA8AQ86V59 439 aaPredicted RBP28.59■■■□□ 2.17
IRF3-220ENST00000598108 TMEM57Q8N5G2 664 aa28.59■■■□□ 2.17
IRF3-220ENST00000598108 IRS2Q9Y4H2 1338 aa28.59■■■□□ 2.17
IRF3-220ENST00000598108 VIL1P09327 827 aaKnown RBP28.58■■■□□ 2.17
IRF3-220ENST00000598108 PODNQ7Z5L7 613 aa28.57■■■□□ 2.16
IRF3-220ENST00000598108 CNOT7Q9UIV1 285 aaKnown RBP28.57■■■□□ 2.16
IRF3-220ENST00000598108 SCN4AP35499 1836 aa28.57■■■□□ 2.16
IRF3-220ENST00000598108 RLBP1P12271 317 aa28.56■■■□□ 2.16
IRF3-220ENST00000598108 COA1Q9GZY4 146 aa28.56■■■□□ 2.16
IRF3-220ENST00000598108 CLEC11AQ9Y240 323 aa28.56■■■□□ 2.16
IRF3-220ENST00000598108 GNAI3P08754 354 aa28.55■■■□□ 2.16
IRF3-220ENST00000598108 C15orf52Q6ZUT6 534 aaKnown RBP28.55■■■□□ 2.16
IRF3-220ENST00000598108 DPF2Q92785 391 aa28.55■■■□□ 2.16
IRF3-220ENST00000598108 ADARB2Q9NS39 739 aaKnown RBP28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms