RNA–Protein interactions for RNA: ENST00000596240.5

LINC00347-204, long intergenic non-protein coding RNA 347, humanhuman

TSL 3

Gene LINC00347, Length 802 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-204ENST00000596240 ADCY9O60503 1353 aa10.72□□□□□ -0.69
LINC00347-204ENST00000596240 COL11A2P13942 1736 aaPredicted RBP10.72□□□□□ -0.69
LINC00347-204ENST00000596240 KDM3BQ7LBC6 1761 aa10.72□□□□□ -0.69
LINC00347-204ENST00000596240 ANKRD31Q8N7Z5 1873 aa10.72□□□□□ -0.69
LINC00347-204ENST00000596240 TLL1O43897 1013 aa10.71□□□□□ -0.69
LINC00347-204ENST00000596240 BCAR3O75815 825 aa10.71□□□□□ -0.69
LINC00347-204ENST00000596240 CABP4P57796 275 aa10.71□□□□□ -0.69
LINC00347-204ENST00000596240 ALDH1L2Q3SY69 923 aa10.71□□□□□ -0.69
LINC00347-204ENST00000596240 AKAP4Q5JQC9 854 aa10.71□□□□□ -0.69
LINC00347-204ENST00000596240 NFATC2IPQ8NCF5 419 aa10.71□□□□□ -0.69
LINC00347-204ENST00000596240 CCDC136Q96JN2 1154 aa10.71□□□□□ -0.69
LINC00347-204ENST00000596240 PRR14Q9BWN1 585 aa10.71□□□□□ -0.69
LINC00347-204ENST00000596240 KIF16BQ96L93 1317 aa10.7□□□□□ -0.7
LINC00347-204ENST00000596240 PTCD1O75127 700 aaKnown RBP10.7□□□□□ -0.7
LINC00347-204ENST00000596240 SSTR3P32745 418 aaPredicted RBP10.7□□□□□ -0.7
LINC00347-204ENST00000596240 DCTN1Q14203 1278 aa10.7□□□□□ -0.7
LINC00347-204ENST00000596240 GPR162Q16538 588 aa10.7□□□□□ -0.7
LINC00347-204ENST00000596240 MCM10Q7L590 875 aa10.7□□□□□ -0.7
LINC00347-204ENST00000596240 SLC52A2Q9HAB3 445 aa10.7□□□□□ -0.7
LINC00347-204ENST00000596240 LGR6Q9HBX8 967 aa10.7□□□□□ -0.7
LINC00347-204ENST00000596240 MBIPQ9NS73 344 aa10.7□□□□□ -0.7
LINC00347-204ENST00000596240 SMC4Q9NTJ3 1288 aa10.7□□□□□ -0.7
LINC00347-204ENST00000596240 BABAM1Q9NWV8 329 aa10.7□□□□□ -0.7
LINC00347-204ENST00000596240 CD2APQ9Y5K6 639 aa10.7□□□□□ -0.7
LINC00347-204ENST00000596240 CEMIPQ8WUJ3 1361 aa10.69□□□□□ -0.7
LINC00347-204ENST00000596240 CHL1O00533 1208 aa10.69□□□□□ -0.7
LINC00347-204ENST00000596240 IPO8O15397 1037 aaKnown RBP10.69□□□□□ -0.7
LINC00347-204ENST00000596240 RNMTO43148 476 aaKnown RBP10.69□□□□□ -0.7
LINC00347-204ENST00000596240 GYS1P13807 737 aa10.69□□□□□ -0.7
LINC00347-204ENST00000596240 HMGB2P26583 209 aaKnown RBP10.69□□□□□ -0.7
LINC00347-204ENST00000596240 CRKLP46109 303 aaKnown RBP10.69□□□□□ -0.7
LINC00347-204ENST00000596240 RC3H1Q5TC82 1133 aaKnown RBP10.69□□□□□ -0.7
LINC00347-204ENST00000596240 IFFO2Q5TF58 517 aa10.69□□□□□ -0.7
LINC00347-204ENST00000596240 EXOC6Q8TAG9 804 aa10.69□□□□□ -0.7
LINC00347-204ENST00000596240 FRAT1Q92837 279 aaPredicted RBP10.69□□□□□ -0.7
LINC00347-204ENST00000596240 HLA-CQ95604 372 aa10.69□□□□□ -0.7
LINC00347-204ENST00000596240 CRBNQ96SW2 442 aa10.69□□□□□ -0.7
LINC00347-204ENST00000596240 MMP10P09238 476 aa10.68□□□□□ -0.7
LINC00347-204ENST00000596240 AAMPQ13685 434 aa10.68□□□□□ -0.7
LINC00347-204ENST00000596240 ZKSCAN2Q63HK3 967 aa10.68□□□□□ -0.7
LINC00347-204ENST00000596240 RTCBQ9Y3I0 505 aaKnown RBP10.68□□□□□ -0.7
LINC00347-204ENST00000596240 SBF1O95248 1867 aa10.68□□□□□ -0.7
LINC00347-204ENST00000596240 CACNA1SQ13698 1873 aa10.68□□□□□ -0.7
LINC00347-204ENST00000596240 COL15A1P39059 1388 aa10.67□□□□□ -0.7
LINC00347-204ENST00000596240 SOS1Q07889 1333 aaPredicted RBP10.67□□□□□ -0.7
LINC00347-204ENST00000596240 USP42Q9H9J4 1324 aaKnown RBP10.67□□□□□ -0.7
LINC00347-204ENST00000596240 ZPR1O75312 459 aa10.67□□□□□ -0.7
LINC00347-204ENST00000596240 RPS6KA4O75676 772 aa10.67□□□□□ -0.7
LINC00347-204ENST00000596240 PRKCSHP14314 528 aaPredicted RBP10.67□□□□□ -0.7
LINC00347-204ENST00000596240 BRPF1P55201 1214 aaPredicted RBP10.67□□□□□ -0.7
LINC00347-204ENST00000596240 SLC39A6Q13433 755 aa10.67□□□□□ -0.7
LINC00347-204ENST00000596240 TWISTNBQ3B726 338 aaPredicted RBP10.67□□□□□ -0.7
LINC00347-204ENST00000596240 B4GALNT3Q6L9W6 998 aa10.67□□□□□ -0.7
LINC00347-204ENST00000596240 INTS5Q6P9B9 1019 aaKnown RBP10.67□□□□□ -0.7
LINC00347-204ENST00000596240 DNAJC10Q8IXB1 793 aa10.67□□□□□ -0.7
LINC00347-204ENST00000596240 TSPYL4Q9UJ04 414 aa10.67□□□□□ -0.7
LINC00347-204ENST00000596240 ATP10DQ9P241 1426 aa10.67□□□□□ -0.7
LINC00347-204ENST00000596240 VAMP4O75379 141 aa10.66□□□□□ -0.7
LINC00347-204ENST00000596240 TAF7Q15545 349 aaPredicted RBP10.66□□□□□ -0.7
LINC00347-204ENST00000596240 MORN1Q5T089 497 aa10.66□□□□□ -0.7
LINC00347-204ENST00000596240 C20orf194Q5TEA3 1177 aa10.66□□□□□ -0.7
LINC00347-204ENST00000596240 FTSJ3Q8IY81 847 aaKnown RBP10.66□□□□□ -0.7
LINC00347-204ENST00000596240 SSH1Q8WYL5 1049 aa10.66□□□□□ -0.7
LINC00347-204ENST00000596240 BCL2L13Q9BXK5 485 aa10.66□□□□□ -0.7
LINC00347-204ENST00000596240 CHMP4AQ9BY43 222 aa10.66□□□□□ -0.7
LINC00347-204ENST00000596240 SRP68Q9UHB9 627 aaKnown RBP10.66□□□□□ -0.7
LINC00347-204ENST00000596240 WWC3Q9ULE0 1092 aa10.66□□□□□ -0.7
LINC00347-204ENST00000596240 ARFGEF2Q9Y6D5 1785 aa10.66□□□□□ -0.7
LINC00347-204ENST00000596240 TIAM2Q8IVF5 1701 aa10.65□□□□□ -0.7
LINC00347-204ENST00000596240 DDR1Q08345 913 aa10.65□□□□□ -0.7
LINC00347-204ENST00000596240 TEFQ10587 303 aa10.65□□□□□ -0.7
LINC00347-204ENST00000596240 TRAPPC3LQ5T215 181 aa10.65□□□□□ -0.7
LINC00347-204ENST00000596240 GPBP1L1Q9HC44 474 aaPredicted RBP10.65□□□□□ -0.7
LINC00347-204ENST00000596240 ZBTB1Q9Y2K1 713 aa10.65□□□□□ -0.7
LINC00347-204ENST00000596240 KDM4AO75164 1064 aa10.64□□□□□ -0.71
LINC00347-204ENST00000596240 CYP19A1P11511 503 aaPredicted RBP10.64□□□□□ -0.71
LINC00347-204ENST00000596240 ATF7IPQ6VMQ6 1270 aa10.64□□□□□ -0.71
LINC00347-204ENST00000596240 SCUBE3Q8IX30 993 aa10.64□□□□□ -0.71
LINC00347-204ENST00000596240 DZIP1LQ8IYY4 767 aaKnown RBP10.64□□□□□ -0.71
LINC00347-204ENST00000596240 C8orf58Q8NAV2 365 aa10.64□□□□□ -0.71
LINC00347-204ENST00000596240 IL17REQ8NFR9 667 aa10.64□□□□□ -0.71
LINC00347-204ENST00000596240 CHMP4BQ9H444 224 aaKnown RBP10.64□□□□□ -0.71
LINC00347-204ENST00000596240 CCDC87Q9NVE4 849 aa10.64□□□□□ -0.71
LINC00347-204ENST00000596240 SLC27A5Q9Y2P5 690 aa10.64□□□□□ -0.71
LINC00347-204ENST00000596240 CARMIL3Q8ND23 1372 aa10.64□□□□□ -0.71
LINC00347-204ENST00000596240 CCDC88AQ3V6T2 1871 aa10.64□□□□□ -0.71
LINC00347-204ENST00000596240 ELL2O00472 640 aaPredicted RBP10.63□□□□□ -0.71
LINC00347-204ENST00000596240 GRIN3BO60391 1043 aa10.63□□□□□ -0.71
LINC00347-204ENST00000596240 GUCA2AQ02747 115 aa10.63□□□□□ -0.71
LINC00347-204ENST00000596240 TSPYL6Q8N831 410 aa10.63□□□□□ -0.71
LINC00347-204ENST00000596240 ARHGAP45Q92619 1136 aa10.63□□□□□ -0.71
LINC00347-204ENST00000596240 NOB1Q9ULX3 412 aaKnown RBP10.63□□□□□ -0.71
LINC00347-204ENST00000596240 HEG1Q9ULI3 1381 aa10.63□□□□□ -0.71
LINC00347-204ENST00000596240 PCNTO95613 3336 aa10.62□□□□□ -0.71
LINC00347-204ENST00000596240 RFC4P35249 363 aa10.62□□□□□ -0.71
LINC00347-204ENST00000596240 NLGN1Q8N2Q7 840 aa10.62□□□□□ -0.71
LINC00347-204ENST00000596240 PANK1Q8TE04 598 aa10.62□□□□□ -0.71
LINC00347-204ENST00000596240 ZNF496Q96IT1 587 aaPredicted RBP10.62□□□□□ -0.71
LINC00347-204ENST00000596240 BEGAINQ9BUH8 593 aa10.62□□□□□ -0.71
LINC00347-204ENST00000596240 API5Q9BZZ5 524 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms