RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 RASAL3Q86YV0 1011 aa12.74□□□□□ -0.37
NOTCH3-202ENST00000595045 CCDC146Q8IYE0 955 aa12.74□□□□□ -0.37
NOTCH3-202ENST00000595045 GGA3Q9NZ52 723 aa12.74□□□□□ -0.37
NOTCH3-202ENST00000595045 POLLQ9UGP5 575 aa12.74□□□□□ -0.37
NOTCH3-202ENST00000595045 KIAA0100Q14667 2235 aaKnown RBP12.74□□□□□ -0.37
NOTCH3-202ENST00000595045 SCN9AQ15858 1988 aa12.74□□□□□ -0.37
NOTCH3-202ENST00000595045 RTL9Q8NET4 1388 aa12.73□□□□□ -0.37
NOTCH3-202ENST00000595045 ASTN2O75129 1339 aaPredicted RBP12.73□□□□□ -0.37
NOTCH3-202ENST00000595045 RALBP1Q15311 655 aa12.73□□□□□ -0.37
NOTCH3-202ENST00000595045 PKN2Q16513 984 aaKnown RBP12.73□□□□□ -0.37
NOTCH3-202ENST00000595045 KIF4BQ2VIQ3 1234 aa12.73□□□□□ -0.37
NOTCH3-202ENST00000595045 TMC4Q7Z404 712 aa12.73□□□□□ -0.37
NOTCH3-202ENST00000595045 SULF1Q8IWU6 871 aa12.73□□□□□ -0.37
NOTCH3-202ENST00000595045 PLBD2Q8NHP8 589 aa12.73□□□□□ -0.37
NOTCH3-202ENST00000595045 CDCA5Q96FF9 252 aa12.73□□□□□ -0.37
NOTCH3-202ENST00000595045 FAM89AQ96GI7 184 aa12.73□□□□□ -0.37
NOTCH3-202ENST00000595045 DDX60Q8IY21 1712 aaKnown RBP12.72□□□□□ -0.37
NOTCH3-202ENST00000595045 ATP5J2-PTCD1G3V325 749 aa12.72□□□□□ -0.37
NOTCH3-202ENST00000595045 RIMBP2O15034 1052 aa12.72□□□□□ -0.37
NOTCH3-202ENST00000595045 ECE2O60344 883 aa12.72□□□□□ -0.37
NOTCH3-202ENST00000595045 GPSM2P81274 684 aa12.72□□□□□ -0.37
NOTCH3-202ENST00000595045 TRIM28Q13263 835 aaKnown RBP12.72□□□□□ -0.37
NOTCH3-202ENST00000595045 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
NOTCH3-202ENST00000595045 ZNF853P0CG23 659 aa12.71□□□□□ -0.37
NOTCH3-202ENST00000595045 NEUROD2Q15784 382 aa12.71□□□□□ -0.37
NOTCH3-202ENST00000595045 DOK7Q18PE1 504 aa12.71□□□□□ -0.37
NOTCH3-202ENST00000595045 ANKRD13DQ6ZTN6 518 aa12.71□□□□□ -0.37
NOTCH3-202ENST00000595045 ZNF296Q8WUU4 475 aaPredicted RBP12.71□□□□□ -0.37
NOTCH3-202ENST00000595045 HDAC9Q9UKV0 1011 aa12.71□□□□□ -0.37
NOTCH3-202ENST00000595045 NSFL1CQ9UNZ2 370 aaKnown RBP12.71□□□□□ -0.37
NOTCH3-202ENST00000595045 ADAMTS8Q9UP79 889 aa12.71□□□□□ -0.37
NOTCH3-202ENST00000595045 PAPPA2Q9BXP8 1791 aa12.71□□□□□ -0.38
NOTCH3-202ENST00000595045 C6orf229H3BNL8 230 aa12.7□□□□□ -0.38
NOTCH3-202ENST00000595045 TBC1D8O95759 1140 aa12.7□□□□□ -0.38
NOTCH3-202ENST00000595045 HOXB7P09629 217 aa12.7□□□□□ -0.38
NOTCH3-202ENST00000595045 LMOD3Q0VAK6 560 aa12.7□□□□□ -0.38
NOTCH3-202ENST00000595045 HDGFL1Q5TGJ6 251 aa12.7□□□□□ -0.38
NOTCH3-202ENST00000595045 GCC1Q96CN9 775 aa12.7□□□□□ -0.38
NOTCH3-202ENST00000595045 SZT2Q5T011 3432 aa12.69□□□□□ -0.38
NOTCH3-202ENST00000595045 VIL1P09327 827 aaKnown RBP12.69□□□□□ -0.38
NOTCH3-202ENST00000595045 DUSP27Q5VZP5 1158 aa12.69□□□□□ -0.38
NOTCH3-202ENST00000595045 TBC1D16Q8TBP0 767 aa12.69□□□□□ -0.38
NOTCH3-202ENST00000595045 RUNDC1Q96C34 613 aa12.69□□□□□ -0.38
NOTCH3-202ENST00000595045 MBIPQ9NS73 344 aa12.69□□□□□ -0.38
NOTCH3-202ENST00000595045 WTIPA6NIX2 430 aaPredicted RBP12.68□□□□□ -0.38
NOTCH3-202ENST00000595045 FKBP1BP68106 108 aa12.68□□□□□ -0.38
NOTCH3-202ENST00000595045 SCARF1Q14162 830 aa12.68□□□□□ -0.38
NOTCH3-202ENST00000595045 RTL5Q5HYW3 569 aaPredicted RBP12.68□□□□□ -0.38
NOTCH3-202ENST00000595045 HABP4Q5JVS0 413 aaKnown RBP12.68□□□□□ -0.38
NOTCH3-202ENST00000595045 ANGEL2Q5VTE6 544 aaKnown RBP12.68□□□□□ -0.38
NOTCH3-202ENST00000595045 FBXO46Q6PJ61 603 aaPredicted RBP12.68□□□□□ -0.38
NOTCH3-202ENST00000595045 MOB2Q70IA6 237 aa12.68□□□□□ -0.38
NOTCH3-202ENST00000595045 EYA3Q99504 573 aa12.68□□□□□ -0.38
NOTCH3-202ENST00000595045 SEC31BQ9NQW1 1179 aa12.68□□□□□ -0.38
NOTCH3-202ENST00000595045 DBF4Q9UBU7 674 aaPredicted RBP12.68□□□□□ -0.38
NOTCH3-202ENST00000595045 LAS1LQ9Y4W2 734 aaKnown RBP12.68□□□□□ -0.38
NOTCH3-202ENST00000595045 A0A0C4DFX4 3053 aa12.68□□□□□ -0.38
NOTCH3-202ENST00000595045 TRIOBPQ9H2D6 2365 aa12.67□□□□□ -0.38
NOTCH3-202ENST00000595045 MYBBP1AQ9BQG0 1328 aaKnown RBP12.67□□□□□ -0.38
NOTCH3-202ENST00000595045 GPR25O00155 361 aa12.67□□□□□ -0.38
NOTCH3-202ENST00000595045 IRS4O14654 1257 aaPredicted RBP12.67□□□□□ -0.38
NOTCH3-202ENST00000595045 ZNF280AP59817 542 aaPredicted RBP12.67□□□□□ -0.38
NOTCH3-202ENST00000595045 RPS8P62241 208 aaKnown RBP12.67□□□□□ -0.38
NOTCH3-202ENST00000595045 PHAXQ9H814 394 aaKnown RBP12.67□□□□□ -0.38
NOTCH3-202ENST00000595045 PODXL2Q9NZ53 605 aa12.67□□□□□ -0.38
NOTCH3-202ENST00000595045 UBE2Q2LH0YL09 131 aa12.66□□□□□ -0.38
NOTCH3-202ENST00000595045 DDX10Q13206 875 aaKnown RBP12.66□□□□□ -0.38
NOTCH3-202ENST00000595045 NOM1Q5C9Z4 860 aaKnown RBP12.66□□□□□ -0.38
NOTCH3-202ENST00000595045 ZBTB38Q8NAP3 1195 aaPredicted RBP12.66□□□□□ -0.38
NOTCH3-202ENST00000595045 GMLQ99445 158 aa12.66□□□□□ -0.38
NOTCH3-202ENST00000595045 HYPKQ9NX55 129 aa12.66□□□□□ -0.38
NOTCH3-202ENST00000595045 PSME4Q14997 1843 aa12.66□□□□□ -0.38
NOTCH3-202ENST00000595045 ZNF609O15014 1411 aa12.65□□□□□ -0.38
NOTCH3-202ENST00000595045 TM4SF4P48230 202 aa12.65□□□□□ -0.38
NOTCH3-202ENST00000595045 RSBN1LQ6PCB5 846 aaPredicted RBP12.65□□□□□ -0.38
NOTCH3-202ENST00000595045 JARID2Q92833 1246 aaPredicted RBP12.65□□□□□ -0.38
NOTCH3-202ENST00000595045 ZC3H12CQ9C0D7 883 aaKnown RBP12.65□□□□□ -0.38
NOTCH3-202ENST00000595045 SCAF8Q9UPN6 1271 aaKnown RBP12.65□□□□□ -0.38
NOTCH3-202ENST00000595045 RANBP2P49792 3224 aaKnown RBP12.65□□□□□ -0.38
NOTCH3-202ENST00000595045 PITPNM2Q9BZ72 1349 aa12.64□□□□□ -0.39
NOTCH3-202ENST00000595045 PRAMEF18Q5VWM3 479 aa12.64□□□□□ -0.39
NOTCH3-202ENST00000595045 C8orf58Q8NAV2 365 aa12.64□□□□□ -0.39
NOTCH3-202ENST00000595045 AGBL3Q8NEM8 1001 aa12.64□□□□□ -0.39
NOTCH3-202ENST00000595045 R3HDMLQ9H3Y0 253 aa12.64□□□□□ -0.39
NOTCH3-202ENST00000595045 MYOZ2Q9NPC6 264 aa12.64□□□□□ -0.39
NOTCH3-202ENST00000595045 G3V3G9 751 aa12.63□□□□□ -0.39
NOTCH3-202ENST00000595045 FKTNO75072 461 aa12.63□□□□□ -0.39
NOTCH3-202ENST00000595045 UFL1O94874 794 aa12.63□□□□□ -0.39
NOTCH3-202ENST00000595045 MKRN3Q13064 507 aaKnown RBP12.63□□□□□ -0.39
NOTCH3-202ENST00000595045 DCAF8Q5TAQ9 597 aa12.63□□□□□ -0.39
NOTCH3-202ENST00000595045 POTEFA5A3E0 1075 aa12.62□□□□□ -0.39
NOTCH3-202ENST00000595045 ELL2O00472 640 aaPredicted RBP12.62□□□□□ -0.39
NOTCH3-202ENST00000595045 PCCAP05165 728 aaPredicted RBP12.62□□□□□ -0.39
NOTCH3-202ENST00000595045 USP17L8P0C7I0 530 aa12.62□□□□□ -0.39
NOTCH3-202ENST00000595045 TSPYL6Q8N831 410 aa12.62□□□□□ -0.39
NOTCH3-202ENST00000595045 MYD88Q99836 296 aa12.62□□□□□ -0.39
NOTCH3-202ENST00000595045 CFHR5Q9BXR6 569 aa12.62□□□□□ -0.39
NOTCH3-202ENST00000595045 ANKIB1Q9P2G1 1089 aa12.62□□□□□ -0.39
NOTCH3-202ENST00000595045 GGA1Q9UJY5 639 aa12.62□□□□□ -0.39
NOTCH3-202ENST00000595045 APAF1O14727 1248 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms