RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 MTHFSDQ2M296 383 aaKnown RBP16.05■□□□□ 0.16
ZNF558-202ENST00000593891 NECTIN2Q92692 538 aa16.05■□□□□ 0.16
ZNF558-202ENST00000593891 TTC28Q96AY4 2481 aa16.05■□□□□ 0.16
ZNF558-202ENST00000593891 ABCC4O15439 1325 aa16.04■□□□□ 0.16
ZNF558-202ENST00000593891 UBE2Q1Q7Z7E8 422 aa16.04■□□□□ 0.16
ZNF558-202ENST00000593891 SLC10A4Q96EP9 437 aa16.04■□□□□ 0.16
ZNF558-202ENST00000593891 SPTBN5Q9NRC6 3674 aaKnown RBP16.04■□□□□ 0.16
ZNF558-202ENST00000593891 CAP1Q01518 475 aa16.03■□□□□ 0.16
ZNF558-202ENST00000593891 C3orf67Q6ZVT6 689 aa16.03■□□□□ 0.16
ZNF558-202ENST00000593891 IBTKQ9P2D0 1353 aaPredicted RBP16.02■□□□□ 0.16
ZNF558-202ENST00000593891 RIMBP2O15034 1052 aa16.02■□□□□ 0.16
ZNF558-202ENST00000593891 ECE2O60344 883 aa16.02■□□□□ 0.16
ZNF558-202ENST00000593891 VIL1P09327 827 aaKnown RBP16.02■□□□□ 0.16
ZNF558-202ENST00000593891 ZBTB48P10074 688 aaPredicted RBP16.02■□□□□ 0.16
ZNF558-202ENST00000593891 ZNF280AP59817 542 aaPredicted RBP16.02■□□□□ 0.16
ZNF558-202ENST00000593891 PRKG1Q13976 671 aa16.02■□□□□ 0.16
ZNF558-202ENST00000593891 KCNQ5Q9NR82 932 aa16.02■□□□□ 0.16
ZNF558-202ENST00000593891 SCAF8Q9UPN6 1271 aaKnown RBP16.02■□□□□ 0.16
ZNF558-202ENST00000593891 IL13P35225 146 aa16.01■□□□□ 0.15
ZNF558-202ENST00000593891 GJA8P48165 433 aa16.01■□□□□ 0.15
ZNF558-202ENST00000593891 BCAMP50895 628 aa16.01■□□□□ 0.15
ZNF558-202ENST00000593891 LDLRAD1Q5T700 205 aa16.01■□□□□ 0.15
ZNF558-202ENST00000593891 SUSD4Q5VX71 490 aa16.01■□□□□ 0.15
ZNF558-202ENST00000593891 GDF15Q99988 308 aa16.01■□□□□ 0.15
ZNF558-202ENST00000593891 RTL9Q8NET4 1388 aa16■□□□□ 0.15
ZNF558-202ENST00000593891 TMEM265A0A087WTH1 108 aa16■□□□□ 0.15
ZNF558-202ENST00000593891 NBPF26B4DH59 902 aa16■□□□□ 0.15
ZNF558-202ENST00000593891 ERVV-1B6SEH8 477 aa16■□□□□ 0.15
ZNF558-202ENST00000593891 TNFRSF10AO00220 468 aa16■□□□□ 0.15
ZNF558-202ENST00000593891 SNRPA1P09661 255 aaKnown RBP16■□□□□ 0.15
ZNF558-202ENST00000593891 GPTP24298 496 aa16■□□□□ 0.15
ZNF558-202ENST00000593891 NBPF10Q6P3W6 841 aaKnown RBP16■□□□□ 0.15
ZNF558-202ENST00000593891 MYOZ2Q9NPC6 264 aa16■□□□□ 0.15
ZNF558-202ENST00000593891 ZBTB4Q9P1Z0 1013 aaPredicted RBP16■□□□□ 0.15
ZNF558-202ENST00000593891 FARP2O94887 1054 aaPredicted RBP15.99■□□□□ 0.15
ZNF558-202ENST00000593891 MTFR1Q15390 333 aa15.99■□□□□ 0.15
ZNF558-202ENST00000593891 DOK7Q18PE1 504 aa15.99■□□□□ 0.15
ZNF558-202ENST00000593891 TMC4Q7Z404 712 aa15.99■□□□□ 0.15
ZNF558-202ENST00000593891 AGBL3Q8NEM8 1001 aa15.99■□□□□ 0.15
ZNF558-202ENST00000593891 ANGEL1Q9UNK9 670 aaKnown RBP15.99■□□□□ 0.15
ZNF558-202ENST00000593891 IRS2Q9Y4H2 1338 aa15.98■□□□□ 0.15
ZNF558-202ENST00000593891 BTBD11A6QL63 1104 aa15.98■□□□□ 0.15
ZNF558-202ENST00000593891 C6orf229H3BNL8 230 aa15.98■□□□□ 0.15
ZNF558-202ENST00000593891 KCNQ3O43525 872 aa15.98■□□□□ 0.15
ZNF558-202ENST00000593891 GJB1P08034 283 aa15.98■□□□□ 0.15
ZNF558-202ENST00000593891 DDX46Q7L014 1031 aaKnown RBP15.98■□□□□ 0.15
ZNF558-202ENST00000593891 PPP1R42Q7Z4L9 355 aa15.98■□□□□ 0.15
ZNF558-202ENST00000593891 IL17REQ8NFR9 667 aa15.98■□□□□ 0.15
ZNF558-202ENST00000593891 SNX27Q96L92 541 aa15.98■□□□□ 0.15
ZNF558-202ENST00000593891 EYA3Q99504 573 aa15.98■□□□□ 0.15
ZNF558-202ENST00000593891 HMOX1P09601 288 aa15.97■□□□□ 0.15
ZNF558-202ENST00000593891 USP17L8P0C7I0 530 aa15.97■□□□□ 0.15
ZNF558-202ENST00000593891 KIF22Q14807 665 aa15.97■□□□□ 0.15
ZNF558-202ENST00000593891 TDHQ8IZJ6 230 aa15.97■□□□□ 0.15
ZNF558-202ENST00000593891 WNK4Q96J92 1243 aa15.97■□□□□ 0.15
ZNF558-202ENST00000593891 GUCD1Q96NT3 240 aa15.97■□□□□ 0.15
ZNF558-202ENST00000593891 NSFL1CQ9UNZ2 370 aaKnown RBP15.97■□□□□ 0.15
ZNF558-202ENST00000593891 G3V3G9 751 aa15.96■□□□□ 0.15
ZNF558-202ENST00000593891 NTSR2O95665 410 aa15.96■□□□□ 0.15
ZNF558-202ENST00000593891 PRMT2P55345 433 aa15.96■□□□□ 0.15
ZNF558-202ENST00000593891 MAP3K12Q12852 859 aa15.96■□□□□ 0.15
ZNF558-202ENST00000593891 GRAPQ13588 217 aa15.96■□□□□ 0.15
ZNF558-202ENST00000593891 SLC10A5Q5PT55 438 aa15.96■□□□□ 0.15
ZNF558-202ENST00000593891 DCAF8Q5TAQ9 597 aa15.96■□□□□ 0.15
ZNF558-202ENST00000593891 FAM109BQ6ICB4 259 aaPredicted RBP15.96■□□□□ 0.15
ZNF558-202ENST00000593891 GRAPLQ8TC17 118 aaPredicted RBP15.96■□□□□ 0.15
ZNF558-202ENST00000593891 UBN2Q6ZU65 1347 aa15.95■□□□□ 0.14
ZNF558-202ENST00000593891 KDM3BQ7LBC6 1761 aa15.95■□□□□ 0.14
ZNF558-202ENST00000593891 GNAT3A8MTJ3 354 aa15.95■□□□□ 0.14
ZNF558-202ENST00000593891 GNRH1P01148 92 aa15.95■□□□□ 0.14
ZNF558-202ENST00000593891 RSBN1LQ6PCB5 846 aaPredicted RBP15.95■□□□□ 0.14
ZNF558-202ENST00000593891 KIF6Q6ZMV9 814 aa15.95■□□□□ 0.14
ZNF558-202ENST00000593891 NGEFQ8N5V2 710 aa15.95■□□□□ 0.14
ZNF558-202ENST00000593891 ZFYVE28Q9HCC9 887 aa15.95■□□□□ 0.14
ZNF558-202ENST00000593891 RNF208Q9H0X6 261 aa15.94■□□□□ 0.14
ZNF558-202ENST00000593891 MAP3K15Q6ZN16 1313 aa15.94■□□□□ 0.14
ZNF558-202ENST00000593891 CCL5P13501 91 aa15.93■□□□□ 0.14
ZNF558-202ENST00000593891 MAFAQ8NHW3 353 aaPredicted RBP15.93■□□□□ 0.14
ZNF558-202ENST00000593891 NBPF9Q3BBW0 867 aa15.92■□□□□ 0.14
ZNF558-202ENST00000593891 PARP10Q53GL7 1025 aa15.92■□□□□ 0.14
ZNF558-202ENST00000593891 ZNF34Q8IZ26 560 aa15.92■□□□□ 0.14
ZNF558-202ENST00000593891 PTPN18Q99952 460 aa15.92■□□□□ 0.14
ZNF558-202ENST00000593891 ZC3H12CQ9C0D7 883 aaKnown RBP15.92■□□□□ 0.14
ZNF558-202ENST00000593891 SYNGAP1Q96PV0 1343 aa15.92■□□□□ 0.14
ZNF558-202ENST00000593891 TESPA1A2RU30 521 aaPredicted RBP15.91■□□□□ 0.14
ZNF558-202ENST00000593891 POTEB2H3BUK9 544 aa15.91■□□□□ 0.14
ZNF558-202ENST00000593891 WDHD1O75717 1129 aaPredicted RBP15.91■□□□□ 0.14
ZNF558-202ENST00000593891 TAF1CQ15572 869 aaPredicted RBP15.91■□□□□ 0.14
ZNF558-202ENST00000593891 U2AF1L4Q8WU68 220 aaKnown RBP15.91■□□□□ 0.14
ZNF558-202ENST00000593891 FAM161BQ96MY7 647 aa15.91■□□□□ 0.14
ZNF558-202ENST00000593891 UTP14AQ9BVJ6 771 aaKnown RBP15.91■□□□□ 0.14
ZNF558-202ENST00000593891 POLLQ9UGP5 575 aa15.91■□□□□ 0.14
ZNF558-202ENST00000593891 UNCXA6NJT0 531 aa15.9■□□□□ 0.14
ZNF558-202ENST00000593891 CAPN2P17655 700 aa15.9■□□□□ 0.14
ZNF558-202ENST00000593891 CLMNQ96JQ2 1002 aa15.9■□□□□ 0.14
ZNF558-202ENST00000593891 UBE2OQ9C0C9 1292 aaKnown RBP15.9■□□□□ 0.14
ZNF558-202ENST00000593891 BIN2Q9UBW5 565 aaPredicted RBP15.9■□□□□ 0.14
ZNF558-202ENST00000593891 PPP1R12BO60237 982 aaPredicted RBP15.89■□□□□ 0.13
ZNF558-202ENST00000593891 ECM2O94769 699 aaPredicted RBP15.89■□□□□ 0.13
ZNF558-202ENST00000593891 GRK4P32298 578 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms