RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 POLLQ9UGP5 575 aa25.37■■□□□ 1.65
COPE-204ENST00000593827 LRRC37AA6NMS7 1700 aa25.37■■□□□ 1.65
COPE-204ENST00000593827 ITGA6P23229 1130 aa25.36■■□□□ 1.65
COPE-204ENST00000593827 CXCL9Q07325 125 aa25.36■■□□□ 1.65
COPE-204ENST00000593827 ANKRD18BA2A2Z9 1011 aa25.35■■□□□ 1.65
COPE-204ENST00000593827 EAPPQ56P03 285 aaPredicted RBP25.35■■□□□ 1.65
COPE-204ENST00000593827 RIMBP2O15034 1052 aa25.34■■□□□ 1.65
COPE-204ENST00000593827 IFIT5Q13325 482 aaKnown RBP25.34■■□□□ 1.65
COPE-204ENST00000593827 SCN4AP35499 1836 aa25.34■■□□□ 1.65
COPE-204ENST00000593827 COL4A5P29400 1685 aa25.33■■□□□ 1.65
COPE-204ENST00000593827 FAM161AQ3B820 660 aa25.33■■□□□ 1.65
COPE-204ENST00000593827 BCL2L13Q9BXK5 485 aa25.33■■□□□ 1.65
COPE-204ENST00000593827 ANKRD2Q9GZV1 360 aa25.33■■□□□ 1.65
COPE-204ENST00000593827 CLEC11AQ9Y240 323 aa25.33■■□□□ 1.65
COPE-204ENST00000593827 CHMP3Q9Y3E7 222 aa25.33■■□□□ 1.65
COPE-204ENST00000593827 RAD17O75943 681 aa25.32■■□□□ 1.64
COPE-204ENST00000593827 HNRNPUQ00839 825 aaKnown RBP eCLIP25.32■■□□□ 1.64
COPE-204ENST00000593827 MINPP1Q9UNW1 487 aa25.32■■□□□ 1.64
COPE-204ENST00000593827 SCNN1DP51172 638 aa25.31■■□□□ 1.64
COPE-204ENST00000593827 BRPF1P55201 1214 aaPredicted RBP25.31■■□□□ 1.64
COPE-204ENST00000593827 CCDC57Q2TAC2 916 aa25.31■■□□□ 1.64
COPE-204ENST00000593827 USP50Q70EL3 339 aaPredicted RBP25.31■■□□□ 1.64
COPE-204ENST00000593827 DUOX1Q9NRD9 1551 aa25.31■■□□□ 1.64
COPE-204ENST00000593827 ECE2O60344 883 aa25.3■■□□□ 1.64
COPE-204ENST00000593827 FOXO4P98177 505 aa25.3■■□□□ 1.64
COPE-204ENST00000593827 TAF7LQ5H9L4 462 aa25.3■■□□□ 1.64
COPE-204ENST00000593827 DBNDD1Q9H9R9 158 aa25.3■■□□□ 1.64
COPE-204ENST00000593827 ADARB2Q9NS39 739 aaKnown RBP25.3■■□□□ 1.64
COPE-204ENST00000593827 GPRC5DQ9NZD1 345 aa25.3■■□□□ 1.64
COPE-204ENST00000593827 LEMD3Q9Y2U8 911 aa25.3■■□□□ 1.64
COPE-204ENST00000593827 TAF1P21675 1872 aa25.3■■□□□ 1.64
COPE-204ENST00000593827 RPS12P25398 132 aaKnown RBP25.29■■□□□ 1.64
COPE-204ENST00000593827 LMBR1LQ6UX01 489 aa25.29■■□□□ 1.64
COPE-204ENST00000593827 API5Q9BZZ5 524 aaKnown RBP25.29■■□□□ 1.64
COPE-204ENST00000593827 GMPSP49915 693 aaPredicted RBP25.28■■□□□ 1.64
COPE-204ENST00000593827 CCT4P50991 539 aaKnown RBP25.28■■□□□ 1.64
COPE-204ENST00000593827 UTYO14607 1347 aa25.28■■□□□ 1.64
COPE-204ENST00000593827 KIF16BQ96L93 1317 aa25.28■■□□□ 1.64
COPE-204ENST00000593827 YDJCA8MPS7 323 aa25.27■■□□□ 1.64
COPE-204ENST00000593827 H7C1D1 291 aa25.27■■□□□ 1.64
COPE-204ENST00000593827 EPS15P42566 896 aa25.27■■□□□ 1.64
COPE-204ENST00000593827 KCNJ4P48050 445 aa25.27■■□□□ 1.64
COPE-204ENST00000593827 DOK7Q18PE1 504 aa25.27■■□□□ 1.64
COPE-204ENST00000593827 DPF2Q92785 391 aa25.27■■□□□ 1.64
COPE-204ENST00000593827 HDAC5Q9UQL6 1122 aa25.27■■□□□ 1.64
COPE-204ENST00000593827 MYH3P11055 1940 aa25.27■■□□□ 1.64
COPE-204ENST00000593827 POTEIP0CG38 1075 aa25.26■■□□□ 1.63
COPE-204ENST00000593827 POTEJP0CG39 1038 aa25.26■■□□□ 1.63
COPE-204ENST00000593827 PODNQ7Z5L7 613 aa25.26■■□□□ 1.63
COPE-204ENST00000593827 RARSP54136 660 aaKnown RBP25.25■■□□□ 1.63
COPE-204ENST00000593827 MED23Q9ULK4 1368 aa25.25■■□□□ 1.63
COPE-204ENST00000593827 COL4A1P02462 1669 aa25.25■■□□□ 1.63
COPE-204ENST00000593827 PSMD14O00487 310 aa25.24■■□□□ 1.63
COPE-204ENST00000593827 IPO8O15397 1037 aaKnown RBP25.24■■□□□ 1.63
COPE-204ENST00000593827 GPR101Q96P66 508 aaPredicted RBP25.24■■□□□ 1.63
COPE-204ENST00000593827 NOB1Q9ULX3 412 aaKnown RBP25.24■■□□□ 1.63
COPE-204ENST00000593827 NBPF7P0C2Y1 421 aaPredicted RBP25.23■■□□□ 1.63
COPE-204ENST00000593827 LDHAL6AQ6ZMR3 332 aa25.23■■□□□ 1.63
COPE-204ENST00000593827 ARHGAP45Q92619 1136 aa25.23■■□□□ 1.63
COPE-204ENST00000593827 SUCLG2Q96I99 432 aa25.23■■□□□ 1.63
COPE-204ENST00000593827 LTBP1Q14766 1721 aa25.23■■□□□ 1.63
COPE-204ENST00000593827 ZNF804BA4D1E1 1349 aa25.22■■□□□ 1.63
COPE-204ENST00000593827 CHRNDQ07001 517 aa25.22■■□□□ 1.63
COPE-204ENST00000593827 CNTROBQ8N137 903 aa25.22■■□□□ 1.63
COPE-204ENST00000593827 COA1Q9GZY4 146 aa25.22■■□□□ 1.63
COPE-204ENST00000593827 CNNM1Q9NRU3 951 aa25.22■■□□□ 1.63
COPE-204ENST00000593827 CNOT7Q9UIV1 285 aaKnown RBP25.22■■□□□ 1.63
COPE-204ENST00000593827 VIL1P09327 827 aaKnown RBP25.21■■□□□ 1.63
COPE-204ENST00000593827 EPHA10Q5JZY3 1008 aa25.21■■□□□ 1.63
COPE-204ENST00000593827 ZC3H15Q8WU90 426 aaKnown RBP25.21■■□□□ 1.63
COPE-204ENST00000593827 MICALL2Q8IY33 904 aa25.2■■□□□ 1.62
COPE-204ENST00000593827 CREBZFQ9NS37 354 aa25.2■■□□□ 1.62
COPE-204ENST00000593827 USP17L3A6NCW0 530 aa25.19■■□□□ 1.62
COPE-204ENST00000593827 USP17L4A6NCW7 530 aa25.19■■□□□ 1.62
COPE-204ENST00000593827 RABL6Q3YEC7 729 aaPredicted RBP25.19■■□□□ 1.62
COPE-204ENST00000593827 MAP1SQ66K74 1059 aaPredicted RBP25.19■■□□□ 1.62
COPE-204ENST00000593827 USP17L1Q7RTZ2 530 aa25.19■■□□□ 1.62
COPE-204ENST00000593827 AGBL3Q8NEM8 1001 aa25.19■■□□□ 1.62
COPE-204ENST00000593827 USP44Q9H0E7 712 aa25.19■■□□□ 1.62
COPE-204ENST00000593827 BICC1Q9H694 974 aaKnown RBP25.19■■□□□ 1.62
COPE-204ENST00000593827 ZBED9Q6R2W3 1325 aa25.18■■□□□ 1.62
COPE-204ENST00000593827 PASKQ96RG2 1323 aa25.18■■□□□ 1.62
COPE-204ENST00000593827 ITGBL1O95965 494 aaPredicted RBP25.18■■□□□ 1.62
COPE-204ENST00000593827 ZBTB12Q9Y330 459 aaPredicted RBP25.18■■□□□ 1.62
COPE-204ENST00000593827 RSBN1LQ6PCB5 846 aaPredicted RBP25.17■■□□□ 1.62
COPE-204ENST00000593827 DNAJC5GQ8N7S2 189 aa25.17■■□□□ 1.62
COPE-204ENST00000593827 KLRG1Q96E93 195 aa25.17■■□□□ 1.62
COPE-204ENST00000593827 UBTFL1P0CB47 393 aaPredicted RBP25.16■■□□□ 1.62
COPE-204ENST00000593827 MMP14P50281 582 aa25.16■■□□□ 1.62
COPE-204ENST00000593827 KAZALD1Q96I82 304 aa25.16■■□□□ 1.62
COPE-204ENST00000593827 MYO3BQ8WXR4 1341 aa25.15■■□□□ 1.62
COPE-204ENST00000593827 TMEM88BA6NKF7 163 aa25.15■■□□□ 1.62
COPE-204ENST00000593827 C15orf52Q6ZUT6 534 aaKnown RBP25.15■■□□□ 1.62
COPE-204ENST00000593827 KCNQ5Q9NR82 932 aa25.15■■□□□ 1.62
COPE-204ENST00000593827 MROH5Q6ZUA9 1318 aa25.14■■□□□ 1.62
COPE-204ENST00000593827 ZNF609O15014 1411 aa25.14■■□□□ 1.62
COPE-204ENST00000593827 STRIP1Q5VSL9 837 aa25.14■■□□□ 1.62
COPE-204ENST00000593827 ZNF804AQ7Z570 1209 aa25.14■■□□□ 1.62
COPE-204ENST00000593827 ZNF594Q96JF6 807 aaPredicted RBP25.14■■□□□ 1.62
COPE-204ENST00000593827 PGAP2Q9UHJ9 254 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms