RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 CA12O43570 354 aa19.05■□□□□ 0.64
PNKP-202ENST00000593706 RPS12P25398 132 aaKnown RBP19.05■□□□□ 0.64
PNKP-202ENST00000593706 RPS8P62241 208 aaKnown RBP19.05■□□□□ 0.64
PNKP-202ENST00000593706 GNAI1P63096 354 aa19.05■□□□□ 0.64
PNKP-202ENST00000593706 TRIM28Q13263 835 aaKnown RBP19.05■□□□□ 0.64
PNKP-202ENST00000593706 DCAF8Q5TAQ9 597 aa19.05■□□□□ 0.64
PNKP-202ENST00000593706 USP48Q86UV5 1035 aa19.05■□□□□ 0.64
PNKP-202ENST00000593706 ZBTB38Q8NAP3 1195 aaPredicted RBP19.05■□□□□ 0.64
PNKP-202ENST00000593706 IFT57Q9NWB7 429 aa19.05■□□□□ 0.64
PNKP-202ENST00000593706 ELL2O00472 640 aaPredicted RBP19.04■□□□□ 0.64
PNKP-202ENST00000593706 BRPF1P55201 1214 aaPredicted RBP19.04■□□□□ 0.64
PNKP-202ENST00000593706 HUNKP57058 714 aa19.04■□□□□ 0.64
PNKP-202ENST00000593706 KRT26Q7Z3Y9 468 aa19.04■□□□□ 0.64
PNKP-202ENST00000593706 TBC1D16Q8TBP0 767 aa19.04■□□□□ 0.64
PNKP-202ENST00000593706 MYD88Q99836 296 aa19.04■□□□□ 0.64
PNKP-202ENST00000593706 PHAXQ9H814 394 aaKnown RBP19.04■□□□□ 0.64
PNKP-202ENST00000593706 ANKIB1Q9P2G1 1089 aa19.04■□□□□ 0.64
PNKP-202ENST00000593706 ZNF646O15015 1829 aaPredicted RBP19.04■□□□□ 0.64
PNKP-202ENST00000593706 RTL9Q8NET4 1388 aa19.04■□□□□ 0.64
PNKP-202ENST00000593706 APAF1O14727 1248 aa19.03■□□□□ 0.64
PNKP-202ENST00000593706 UFL1O94874 794 aa19.03■□□□□ 0.64
PNKP-202ENST00000593706 CCDC152Q4G0S7 254 aa19.03■□□□□ 0.64
PNKP-202ENST00000593706 CCDC184Q52MB2 194 aa19.03■□□□□ 0.64
PNKP-202ENST00000593706 RBM26Q5T8P6 1007 aaKnown RBP19.03■□□□□ 0.64
PNKP-202ENST00000593706 DCPSQ96C86 337 aaKnown RBP19.03■□□□□ 0.64
PNKP-202ENST00000593706 ZC3H12CQ9C0D7 883 aaKnown RBP19.03■□□□□ 0.64
PNKP-202ENST00000593706 EGFRP00533 1210 aa19.02■□□□□ 0.64
PNKP-202ENST00000593706 ZNF853P0CG23 659 aa19.02■□□□□ 0.64
PNKP-202ENST00000593706 NOGQ13253 232 aa19.02■□□□□ 0.64
PNKP-202ENST00000593706 SEC31BQ9NQW1 1179 aa19.02■□□□□ 0.64
PNKP-202ENST00000593706 KCNQ5Q9NR82 932 aa19.02■□□□□ 0.64
PNKP-202ENST00000593706 DDX58O95786 925 aaKnown RBP19.01■□□□□ 0.63
PNKP-202ENST00000593706 KIF4BQ2VIQ3 1234 aa19.01■□□□□ 0.63
PNKP-202ENST00000593706 CCDC191Q8NCU4 936 aa19.01■□□□□ 0.63
PNKP-202ENST00000593706 CWC25Q9NXE8 425 aaPredicted RBP19.01■□□□□ 0.63
PNKP-202ENST00000593706 GGA1Q9UJY5 639 aa19.01■□□□□ 0.63
PNKP-202ENST00000593706 CCDC85CA6NKD9 419 aa19■□□□□ 0.63
PNKP-202ENST00000593706 ADM5C9JUS6 153 aa19■□□□□ 0.63
PNKP-202ENST00000593706 PDE8AO60658 829 aa19■□□□□ 0.63
PNKP-202ENST00000593706 PCCAP05165 728 aaPredicted RBP19■□□□□ 0.63
PNKP-202ENST00000593706 DLK2Q6UY11 383 aa19■□□□□ 0.63
PNKP-202ENST00000593706 CCDC85AQ96PX6 553 aaPredicted RBP19■□□□□ 0.63
PNKP-202ENST00000593706 PODXL2Q9NZ53 605 aa19■□□□□ 0.63
PNKP-202ENST00000593706 SULF1Q8IWU6 871 aa18.99■□□□□ 0.63
PNKP-202ENST00000593706 C2orf69Q8N8R5 385 aa18.99■□□□□ 0.63
PNKP-202ENST00000593706 CHMP4AQ9BY43 222 aa18.99■□□□□ 0.63
PNKP-202ENST00000593706 GBA2Q9HCG7 927 aaPredicted RBP18.99■□□□□ 0.63
PNKP-202ENST00000593706 GGA3Q9NZ52 723 aa18.99■□□□□ 0.63
PNKP-202ENST00000593706 PAPPA2Q9BXP8 1791 aa18.98■□□□□ 0.63
PNKP-202ENST00000593706 FAM161AQ3B820 660 aa18.98■□□□□ 0.63
PNKP-202ENST00000593706 CCDC30Q5VVM6 783 aa18.98■□□□□ 0.63
PNKP-202ENST00000593706 JARID2Q92833 1246 aaPredicted RBP18.98■□□□□ 0.63
PNKP-202ENST00000593706 XDHP47989 1333 aa18.98■□□□□ 0.63
PNKP-202ENST00000593706 TNRC18O15417 2968 aaPredicted RBP18.97■□□□□ 0.63
PNKP-202ENST00000593706 A0A1B0GUL6 1792 aa18.97■□□□□ 0.63
PNKP-202ENST00000593706 VIL1P09327 827 aaKnown RBP18.97■□□□□ 0.63
PNKP-202ENST00000593706 RGMBQ6NW40 437 aa18.97■□□□□ 0.63
PNKP-202ENST00000593706 ANKRD18AQ8IVF6 992 aa18.97■□□□□ 0.63
PNKP-202ENST00000593706 C8orf58Q8NAV2 365 aa18.97■□□□□ 0.63
PNKP-202ENST00000593706 METTL22Q9BUU2 404 aaPredicted RBP18.97■□□□□ 0.63
PNKP-202ENST00000593706 ZNF609O15014 1411 aa18.97■□□□□ 0.63
PNKP-202ENST00000593706 ECM29Q5VYK3 1845 aa18.96■□□□□ 0.63
PNKP-202ENST00000593706 MAP3K2Q9Y2U5 619 aa18.96■□□□□ 0.63
PNKP-202ENST00000593706 ZNF157P51786 506 aaPredicted RBP18.95■□□□□ 0.62
PNKP-202ENST00000593706 RSBN1LQ6PCB5 846 aaPredicted RBP18.95■□□□□ 0.62
PNKP-202ENST00000593706 ZIC5Q96T25 663 aa18.95■□□□□ 0.62
PNKP-202ENST00000593706 CDC5LQ99459 802 aaKnown RBP18.95■□□□□ 0.62
PNKP-202ENST00000593706 MCOLN1Q9GZU1 580 aa18.95■□□□□ 0.62
PNKP-202ENST00000593706 CTSWP56202 376 aa18.94■□□□□ 0.62
PNKP-202ENST00000593706 AGBL3Q8NEM8 1001 aa18.94■□□□□ 0.62
PNKP-202ENST00000593706 CCDC102AQ96A19 550 aa18.94■□□□□ 0.62
PNKP-202ENST00000593706 STK31Q9BXU1 1019 aa18.94■□□□□ 0.62
PNKP-202ENST00000593706 ASTN2O75129 1339 aaPredicted RBP18.94■□□□□ 0.62
PNKP-202ENST00000593706 PDE4DIPQ5VU43 2346 aa18.93■□□□□ 0.62
PNKP-202ENST00000593706 NEXNQ0ZGT2 675 aa18.93■□□□□ 0.62
PNKP-202ENST00000593706 DGKZQ13574 1117 aa18.93■□□□□ 0.62
PNKP-202ENST00000593706 CDCA5Q96FF9 252 aa18.93■□□□□ 0.62
PNKP-202ENST00000593706 PI4KAP2A4QPH2 592 aa18.92■□□□□ 0.62
PNKP-202ENST00000593706 FAM155AB1AL88 458 aaPredicted RBP18.92■□□□□ 0.62
PNKP-202ENST00000593706 ATP2B4P23634 1241 aa18.92■□□□□ 0.62
PNKP-202ENST00000593706 ZNF280AP59817 542 aaPredicted RBP18.92■□□□□ 0.62
PNKP-202ENST00000593706 ANGEL2Q5VTE6 544 aaKnown RBP18.92■□□□□ 0.62
PNKP-202ENST00000593706 PI4KAP1Q8N8J0 262 aa18.92■□□□□ 0.62
PNKP-202ENST00000593706 TSR2Q969E8 191 aaKnown RBP18.92■□□□□ 0.62
PNKP-202ENST00000593706 MED23Q9ULK4 1368 aa18.92■□□□□ 0.62
PNKP-202ENST00000593706 USP17L8P0C7I0 530 aa18.91■□□□□ 0.62
PNKP-202ENST00000593706 KIF23Q02241 960 aaPredicted RBP18.91■□□□□ 0.62
PNKP-202ENST00000593706 MLLT1Q03111 559 aaPredicted RBP18.91■□□□□ 0.62
PNKP-202ENST00000593706 SCARF1Q14162 830 aa18.91■□□□□ 0.62
PNKP-202ENST00000593706 KSR2Q6VAB6 950 aa18.91■□□□□ 0.62
PNKP-202ENST00000593706 TSPYL6Q8N831 410 aa18.91■□□□□ 0.62
PNKP-202ENST00000593706 MYOZ2Q9NPC6 264 aa18.91■□□□□ 0.62
PNKP-202ENST00000593706 SAGE1Q9NXZ1 904 aa18.91■□□□□ 0.62
PNKP-202ENST00000593706 USP17L3A6NCW0 530 aa18.9■□□□□ 0.62
PNKP-202ENST00000593706 USP17L4A6NCW7 530 aa18.9■□□□□ 0.62
PNKP-202ENST00000593706 ANP32CO43423 234 aa18.9■□□□□ 0.62
PNKP-202ENST00000593706 SLC10A3P09131 477 aa18.9■□□□□ 0.62
PNKP-202ENST00000593706 USP17L1Q7RTZ2 530 aa18.9■□□□□ 0.62
PNKP-202ENST00000593706 PODNQ7Z5L7 613 aa18.9■□□□□ 0.62
PNKP-202ENST00000593706 FBXW7Q969H0 707 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms