RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 MAP2K1Q02750 393 aaPredicted RBP26.35■■□□□ 1.81
TRIM47-207ENST00000593089 ZC3H15Q8WU90 426 aaKnown RBP26.35■■□□□ 1.81
TRIM47-207ENST00000593089 KCNQ5Q9NR82 932 aa26.35■■□□□ 1.81
TRIM47-207ENST00000593089 ANKIB1Q9P2G1 1089 aa26.35■■□□□ 1.81
TRIM47-207ENST00000593089 LBX1P52954 281 aa26.34■■□□□ 1.81
TRIM47-207ENST00000593089 KSR2Q6VAB6 950 aa26.34■■□□□ 1.81
TRIM47-207ENST00000593089 WWC1Q8IX03 1113 aa26.34■■□□□ 1.81
TRIM47-207ENST00000593089 DPF2Q92785 391 aa26.34■■□□□ 1.81
TRIM47-207ENST00000593089 STK31Q9BXU1 1019 aa26.34■■□□□ 1.81
TRIM47-207ENST00000593089 ZNF408Q9H9D4 720 aa26.34■■□□□ 1.81
TRIM47-207ENST00000593089 THSD7BQ9C0I4 1608 aa26.34■■□□□ 1.81
TRIM47-207ENST00000593089 PI4KAP2A4QPH2 592 aa26.33■■□□□ 1.81
TRIM47-207ENST00000593089 UFL1O94874 794 aa26.33■■□□□ 1.81
TRIM47-207ENST00000593089 CCDC27Q2M243 656 aa26.33■■□□□ 1.81
TRIM47-207ENST00000593089 SAMD7Q7Z3H4 446 aa26.33■■□□□ 1.81
TRIM47-207ENST00000593089 PI4KAP1Q8N8J0 262 aa26.33■■□□□ 1.81
TRIM47-207ENST00000593089 ZC3H12CQ9C0D7 883 aaKnown RBP26.33■■□□□ 1.81
TRIM47-207ENST00000593089 PODXL2Q9NZ53 605 aa26.33■■□□□ 1.81
TRIM47-207ENST00000593089 RTL9Q8NET4 1388 aa26.33■■□□□ 1.8
TRIM47-207ENST00000593089 CDC37L1Q7L3B6 337 aa26.32■■□□□ 1.8
TRIM47-207ENST00000593089 G3V3G9 751 aa26.31■■□□□ 1.8
TRIM47-207ENST00000593089 IGKV5-2P06315 115 aa26.31■■□□□ 1.8
TRIM47-207ENST00000593089 TWISTNBQ3B726 338 aaPredicted RBP26.31■■□□□ 1.8
TRIM47-207ENST00000593089 TBC1D10BQ4KMP7 808 aaPredicted RBP26.31■■□□□ 1.8
TRIM47-207ENST00000593089 DCAF8Q5TAQ9 597 aa26.31■■□□□ 1.8
TRIM47-207ENST00000593089 SAPCD2Q86UD0 394 aa26.31■■□□□ 1.8
TRIM47-207ENST00000593089 GGA1Q9UJY5 639 aa26.31■■□□□ 1.8
TRIM47-207ENST00000593089 SCN9AQ15858 1988 aa26.31■■□□□ 1.8
TRIM47-207ENST00000593089 HSPA8P11142 646 aaKnown RBP26.3■■□□□ 1.8
TRIM47-207ENST00000593089 RPS12P25398 132 aaKnown RBP26.3■■□□□ 1.8
TRIM47-207ENST00000593089 USP48Q86UV5 1035 aa26.3■■□□□ 1.8
TRIM47-207ENST00000593089 ANKRD18AQ8IVF6 992 aa26.3■■□□□ 1.8
TRIM47-207ENST00000593089 EGFRP00533 1210 aa26.29■■□□□ 1.8
TRIM47-207ENST00000593089 NEXNQ0ZGT2 675 aa26.29■■□□□ 1.8
TRIM47-207ENST00000593089 RBM26Q5T8P6 1007 aaKnown RBP26.29■■□□□ 1.8
TRIM47-207ENST00000593089 G2E3Q7L622 706 aa26.29■■□□□ 1.8
TRIM47-207ENST00000593089 MYH3P11055 1940 aa26.28■■□□□ 1.8
TRIM47-207ENST00000593089 CTSWP56202 376 aa26.28■■□□□ 1.8
TRIM47-207ENST00000593089 CWF19L2Q2TBE0 894 aaKnown RBP26.28■■□□□ 1.8
TRIM47-207ENST00000593089 MRS2Q9HD23 443 aa26.28■■□□□ 1.8
TRIM47-207ENST00000593089 SPEF2Q9C093 1822 aa26.28■■□□□ 1.8
TRIM47-207ENST00000593089 AOC2O75106 756 aa26.27■■□□□ 1.8
TRIM47-207ENST00000593089 SLC4A2P04920 1241 aa26.27■■□□□ 1.8
TRIM47-207ENST00000593089 DLK2Q6UY11 383 aa26.27■■□□□ 1.8
TRIM47-207ENST00000593089 XDHP47989 1333 aa26.26■■□□□ 1.79
TRIM47-207ENST00000593089 IL16Q14005 1332 aa26.26■■□□□ 1.79
TRIM47-207ENST00000593089 BEGAINQ9BUH8 593 aa26.26■■□□□ 1.79
TRIM47-207ENST00000593089 POLR2AP24928 1970 aaKnown RBP26.26■■□□□ 1.79
TRIM47-207ENST00000593089 NEURL1BA8MQ27 555 aa26.25■■□□□ 1.79
TRIM47-207ENST00000593089 VIL1P09327 827 aaKnown RBP26.25■■□□□ 1.79
TRIM47-207ENST00000593089 TTLL11Q8NHH1 800 aa26.25■■□□□ 1.79
TRIM47-207ENST00000593089 CDC5LQ99459 802 aaKnown RBP26.25■■□□□ 1.79
TRIM47-207ENST00000593089 SALL2Q9Y467 1007 aaPredicted RBP26.25■■□□□ 1.79
TRIM47-207ENST00000593089 KRT26Q7Z3Y9 468 aa26.24■■□□□ 1.79
TRIM47-207ENST00000593089 GREM2Q9H772 168 aa26.24■■□□□ 1.79
TRIM47-207ENST00000593089 ATP2B4P23634 1241 aa26.23■■□□□ 1.79
TRIM47-207ENST00000593089 MAP2K2P36507 400 aa26.23■■□□□ 1.79
TRIM47-207ENST00000593089 KIF4BQ2VIQ3 1234 aa26.23■■□□□ 1.79
TRIM47-207ENST00000593089 DCPSQ96C86 337 aaKnown RBP26.23■■□□□ 1.79
TRIM47-207ENST00000593089 HHIPL1Q96JK4 782 aa26.23■■□□□ 1.79
TRIM47-207ENST00000593089 PSME4Q14997 1843 aa26.23■■□□□ 1.79
TRIM47-207ENST00000593089 FANCIQ9NVI1 1328 aa26.22■■□□□ 1.79
TRIM47-207ENST00000593089 ANP32CO43423 234 aa26.22■■□□□ 1.79
TRIM47-207ENST00000593089 UBE3BQ7Z3V4 1068 aa26.22■■□□□ 1.79
TRIM47-207ENST00000593089 ADM5C9JUS6 153 aa26.21■■□□□ 1.79
TRIM47-207ENST00000593089 FLIIQ13045 1269 aa26.21■■□□□ 1.79
TRIM47-207ENST00000593089 WTIPA6NIX2 430 aaPredicted RBP26.2■■□□□ 1.78
TRIM47-207ENST00000593089 H7C1W4 665 aa26.2■■□□□ 1.78
TRIM47-207ENST00000593089 HUNKP57058 714 aa26.2■■□□□ 1.78
TRIM47-207ENST00000593089 NCBP3Q53F19 620 aaKnown RBP26.2■■□□□ 1.78
TRIM47-207ENST00000593089 RSBN1LQ6PCB5 846 aaPredicted RBP26.2■■□□□ 1.78
TRIM47-207ENST00000593089 BSDC1Q9NW68 430 aaPredicted RBP26.2■■□□□ 1.78
TRIM47-207ENST00000593089 TSKSQ9UJT2 592 aa26.2■■□□□ 1.78
TRIM47-207ENST00000593089 ZEB1P37275 1124 aaPredicted RBP26.19■■□□□ 1.78
TRIM47-207ENST00000593089 FKBP5Q13451 457 aaPredicted RBP26.19■■□□□ 1.78
TRIM47-207ENST00000593089 GGA3Q9NZ52 723 aa26.19■■□□□ 1.78
TRIM47-207ENST00000593089 MINPP1Q9UNW1 487 aa26.19■■□□□ 1.78
TRIM47-207ENST00000593089 ASTN2O75129 1339 aaPredicted RBP26.18■■□□□ 1.78
TRIM47-207ENST00000593089 GCKRQ14397 625 aa26.18■■□□□ 1.78
TRIM47-207ENST00000593089 AGBL3Q8NEM8 1001 aa26.18■■□□□ 1.78
TRIM47-207ENST00000593089 CACNA1FO60840 1977 aa26.17■■□□□ 1.78
TRIM47-207ENST00000593089 DNAAF4Q8WXU2 420 aa26.17■■□□□ 1.78
TRIM47-207ENST00000593089 GBA2Q9HCG7 927 aaPredicted RBP26.17■■□□□ 1.78
TRIM47-207ENST00000593089 ZNF609O15014 1411 aa26.16■■□□□ 1.78
TRIM47-207ENST00000593089 USP17L3A6NCW0 530 aa26.16■■□□□ 1.78
TRIM47-207ENST00000593089 USP17L4A6NCW7 530 aa26.16■■□□□ 1.78
TRIM47-207ENST00000593089 ZNF316A6NFI3 1004 aaPredicted RBP26.16■■□□□ 1.78
TRIM47-207ENST00000593089 CCT4P50991 539 aaKnown RBP26.16■■□□□ 1.78
TRIM47-207ENST00000593089 USP17L1Q7RTZ2 530 aa26.16■■□□□ 1.78
TRIM47-207ENST00000593089 PODNQ7Z5L7 613 aa26.16■■□□□ 1.78
TRIM47-207ENST00000593089 WDR63Q8IWG1 891 aa26.16■■□□□ 1.78
TRIM47-207ENST00000593089 SULF1Q8IWU6 871 aa26.16■■□□□ 1.78
TRIM47-207ENST00000593089 MYH16Q9H6N6 1097 aa26.16■■□□□ 1.78
TRIM47-207ENST00000593089 MED23Q9ULK4 1368 aa26.16■■□□□ 1.78
TRIM47-207ENST00000593089 VAMP4O75379 141 aa26.15■■□□□ 1.78
TRIM47-207ENST00000593089 IGHMBP2P38935 993 aaKnown RBP26.15■■□□□ 1.78
TRIM47-207ENST00000593089 BRPF1P55201 1214 aaPredicted RBP26.15■■□□□ 1.78
TRIM47-207ENST00000593089 ZNF280AP59817 542 aaPredicted RBP26.15■■□□□ 1.78
TRIM47-207ENST00000593089 EXOSC9Q06265 439 aaKnown RBP26.15■■□□□ 1.78
TRIM47-207ENST00000593089 C2orf69Q8N8R5 385 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms