RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 ANKIB1Q9P2G1 1089 aa29.77■■■□□ 2.36
MBD3-211ENST00000592965 H7C1W4 665 aa29.76■■■□□ 2.35
MBD3-211ENST00000592965 ECE2O60344 883 aa29.76■■■□□ 2.35
MBD3-211ENST00000592965 UFL1O94874 794 aa29.76■■■□□ 2.35
MBD3-211ENST00000592965 DNAAF4Q8WXU2 420 aa29.76■■■□□ 2.35
MBD3-211ENST00000592965 GPR101Q96P66 508 aaPredicted RBP29.76■■■□□ 2.35
MBD3-211ENST00000592965 CDC5LQ99459 802 aaKnown RBP29.76■■■□□ 2.35
MBD3-211ENST00000592965 MYH16Q9H6N6 1097 aa29.76■■■□□ 2.35
MBD3-211ENST00000592965 SPINK5Q9NQ38 1064 aaPredicted RBP29.76■■■□□ 2.35
MBD3-211ENST00000592965 GGA1Q9UJY5 639 aa29.76■■■□□ 2.35
MBD3-211ENST00000592965 PSMD14O00487 310 aa29.75■■■□□ 2.35
MBD3-211ENST00000592965 GCKRQ14397 625 aa29.75■■■□□ 2.35
MBD3-211ENST00000592965 UBE3BQ7Z3V4 1068 aa29.75■■■□□ 2.35
MBD3-211ENST00000592965 DPF2Q92785 391 aa29.75■■■□□ 2.35
MBD3-211ENST00000592965 ZC3H12CQ9C0D7 883 aaKnown RBP29.75■■■□□ 2.35
MBD3-211ENST00000592965 PSME4Q14997 1843 aa29.75■■■□□ 2.35
MBD3-211ENST00000592965 XDHP47989 1333 aa29.74■■■□□ 2.35
MBD3-211ENST00000592965 RASSF10A6NK89 507 aa29.74■■■□□ 2.35
MBD3-211ENST00000592965 PGAP2Q9UHJ9 254 aa29.74■■■□□ 2.35
MBD3-211ENST00000592965 CNOT7Q9UIV1 285 aaKnown RBP29.74■■■□□ 2.35
MBD3-211ENST00000592965 DOK7Q18PE1 504 aa29.73■■■□□ 2.35
MBD3-211ENST00000592965 LINS1Q8NG48 757 aa29.73■■■□□ 2.35
MBD3-211ENST00000592965 ZC3H15Q8WU90 426 aaKnown RBP29.73■■■□□ 2.35
MBD3-211ENST00000592965 PLA2G12BQ9BX93 195 aa29.73■■■□□ 2.35
MBD3-211ENST00000592965 GREM2Q9H772 168 aa29.73■■■□□ 2.35
MBD3-211ENST00000592965 RPS12P25398 132 aaKnown RBP29.72■■■□□ 2.35
MBD3-211ENST00000592965 MICALL2Q8IY33 904 aa29.72■■■□□ 2.35
MBD3-211ENST00000592965 ZBTB12Q9Y330 459 aaPredicted RBP29.72■■■□□ 2.35
MBD3-211ENST00000592965 H7C1D1 291 aa29.71■■■□□ 2.35
MBD3-211ENST00000592965 VEGFBP49765 207 aa29.71■■■□□ 2.35
MBD3-211ENST00000592965 HIRAP54198 1017 aaPredicted RBP29.71■■■□□ 2.35
MBD3-211ENST00000592965 TRPM4Q8TD43 1214 aa29.71■■■□□ 2.35
MBD3-211ENST00000592965 SHTN1A0MZ66 631 aa29.7■■■□□ 2.35
MBD3-211ENST00000592965 TRAF5O00463 557 aa29.7■■■□□ 2.35
MBD3-211ENST00000592965 CASP7P55210 303 aa29.7■■■□□ 2.35
MBD3-211ENST00000592965 BSDC1Q9NW68 430 aaPredicted RBP29.7■■■□□ 2.35
MBD3-211ENST00000592965 ZNF521Q96K83 1311 aa29.7■■■□□ 2.34
MBD3-211ENST00000592965 FMR1Q06787 632 aaKnown RBP eCLIP29.69■■■□□ 2.34
MBD3-211ENST00000592965 KCNQ5Q9NR82 932 aa29.69■■■□□ 2.34
MBD3-211ENST00000592965 ABT1Q9ULW3 272 aaKnown RBP29.69■■■□□ 2.34
MBD3-211ENST00000592965 ZNF609O15014 1411 aa29.69■■■□□ 2.34
MBD3-211ENST00000592965 ATP2B4P23634 1241 aa29.68■■■□□ 2.34
MBD3-211ENST00000592965 DEFB115Q30KQ5 88 aa29.68■■■□□ 2.34
MBD3-211ENST00000592965 COL13A1Q5TAT6 717 aaPredicted RBP29.67■■■□□ 2.34
MBD3-211ENST00000592965 CST9Q5W186 159 aa29.67■■■□□ 2.34
MBD3-211ENST00000592965 G3V3G9 751 aa29.66■■■□□ 2.34
MBD3-211ENST00000592965 VIL1P09327 827 aaKnown RBP29.66■■■□□ 2.34
MBD3-211ENST00000592965 DCAF8Q5TAQ9 597 aa29.66■■■□□ 2.34
MBD3-211ENST00000592965 MINPP1Q9UNW1 487 aa29.66■■■□□ 2.34
MBD3-211ENST00000592965 THSD7BQ9C0I4 1608 aa29.66■■■□□ 2.34
MBD3-211ENST00000592965 GLIS2Q9BZE0 524 aaPredicted RBP29.65■■■□□ 2.34
MBD3-211ENST00000592965 MED23Q9ULK4 1368 aa29.64■■■□□ 2.34
MBD3-211ENST00000592965 CSF1RP07333 972 aa29.64■■■□□ 2.34
MBD3-211ENST00000592965 FAM161AQ3B820 660 aa29.64■■■□□ 2.34
MBD3-211ENST00000592965 POLR2AP24928 1970 aaKnown RBP29.64■■■□□ 2.34
MBD3-211ENST00000592965 F6X3S4 739 aa29.63■■■□□ 2.33
MBD3-211ENST00000592965 IGHMBP2P38935 993 aaKnown RBP29.63■■■□□ 2.33
MBD3-211ENST00000592965 BEND3Q5T5X7 828 aa29.63■■■□□ 2.33
MBD3-211ENST00000592965 CDC37L1Q7L3B6 337 aa29.63■■■□□ 2.33
MBD3-211ENST00000592965 SAMD7Q7Z3H4 446 aa29.63■■■□□ 2.33
MBD3-211ENST00000592965 ITGA6P23229 1130 aa29.62■■■□□ 2.33
MBD3-211ENST00000592965 TLL2Q9Y6L7 1015 aa29.62■■■□□ 2.33
MBD3-211ENST00000592965 WDR33Q9C0J8 1336 aaKnown RBP29.62■■■□□ 2.33
MBD3-211ENST00000592965 TBC1D10BQ4KMP7 808 aaPredicted RBP29.61■■■□□ 2.33
MBD3-211ENST00000592965 ZNF646O15015 1829 aaPredicted RBP29.6■■■□□ 2.33
MBD3-211ENST00000592965 CELF2O95319 508 aaKnown RBP29.6■■■□□ 2.33
MBD3-211ENST00000592965 EGFRP00533 1210 aa29.6■■■□□ 2.33
MBD3-211ENST00000592965 CCT4P50991 539 aaKnown RBP29.6■■■□□ 2.33
MBD3-211ENST00000592965 PODNQ7Z5L7 613 aa29.6■■■□□ 2.33
MBD3-211ENST00000592965 RSBN1LQ6PCB5 846 aaPredicted RBP29.59■■■□□ 2.33
MBD3-211ENST00000592965 AGBL3Q8NEM8 1001 aa29.59■■■□□ 2.33
MBD3-211ENST00000592965 WTIPA6NIX2 430 aaPredicted RBP29.58■■■□□ 2.33
MBD3-211ENST00000592965 ECE1P42892 770 aa29.58■■■□□ 2.33
MBD3-211ENST00000592965 WBP1LQ9NX94 342 aa29.58■■■□□ 2.33
MBD3-211ENST00000592965 LEMD3Q9Y2U8 911 aa29.58■■■□□ 2.33
MBD3-211ENST00000592965 A0A1B0GUL6 1792 aa29.57■■■□□ 2.32
MBD3-211ENST00000592965 FOXN1O15353 648 aa29.57■■■□□ 2.32
MBD3-211ENST00000592965 ZNF280AP59817 542 aaPredicted RBP29.57■■■□□ 2.32
MBD3-211ENST00000592965 KIF4BQ2VIQ3 1234 aa29.57■■■□□ 2.32
MBD3-211ENST00000592965 AIDAQ96BJ3 306 aa29.57■■■□□ 2.32
MBD3-211ENST00000592965 CAPNS2Q96L46 248 aa29.57■■■□□ 2.32
MBD3-211ENST00000592965 MPHOSPH8Q99549 860 aa29.57■■■□□ 2.32
MBD3-211ENST00000592965 ANKRD2Q9GZV1 360 aa29.57■■■□□ 2.32
MBD3-211ENST00000592965 FOXO4P98177 505 aa29.56■■■□□ 2.32
MBD3-211ENST00000592965 SAPCD2Q86UD0 394 aa29.56■■■□□ 2.32
MBD3-211ENST00000592965 GMLQ99445 158 aa29.56■■■□□ 2.32
MBD3-211ENST00000592965 ANKRD18BA2A2Z9 1011 aa29.55■■■□□ 2.32
MBD3-211ENST00000592965 USP17L3A6NCW0 530 aa29.55■■■□□ 2.32
MBD3-211ENST00000592965 USP17L4A6NCW7 530 aa29.55■■■□□ 2.32
MBD3-211ENST00000592965 GRM8O00222 908 aa29.55■■■□□ 2.32
MBD3-211ENST00000592965 USP17L1Q7RTZ2 530 aa29.55■■■□□ 2.32
MBD3-211ENST00000592965 USP48Q86UV5 1035 aa29.55■■■□□ 2.32
MBD3-211ENST00000592965 HHIPL1Q96JK4 782 aa29.55■■■□□ 2.32
MBD3-211ENST00000592965 ALDH1L1O75891 902 aa29.54■■■□□ 2.32
MBD3-211ENST00000592965 RBM26Q5T8P6 1007 aaKnown RBP29.54■■■□□ 2.32
MBD3-211ENST00000592965 PAXIP1Q6ZW49 1069 aaPredicted RBP29.54■■■□□ 2.32
MBD3-211ENST00000592965 KRT26Q7Z3Y9 468 aa29.54■■■□□ 2.32
MBD3-211ENST00000592965 ZNF804BA4D1E1 1349 aa29.53■■■□□ 2.32
MBD3-211ENST00000592965 E9PSI1 815 aa29.53■■■□□ 2.32
MBD3-211ENST00000592965 MAP2K1Q02750 393 aaPredicted RBP29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms