RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 TRMT112Q9UI30 125 aaKnown RBP14.97□□□□□ -0.01
DDX39A-219ENST00000592927 ARFGEF2Q9Y6D5 1785 aa14.97□□□□□ -0.01
DDX39A-219ENST00000592927 NEURL1BA8MQ27 555 aa14.96□□□□□ -0.01
DDX39A-219ENST00000592927 CELF2O95319 508 aaKnown RBP14.96□□□□□ -0.01
DDX39A-219ENST00000592927 COL11A2P13942 1736 aaPredicted RBP14.96□□□□□ -0.01
DDX39A-219ENST00000592927 TRIM27P14373 513 aa14.96□□□□□ -0.01
DDX39A-219ENST00000592927 SYNE4Q8N205 404 aa14.96□□□□□ -0.01
DDX39A-219ENST00000592927 ANKRD31Q8N7Z5 1873 aa14.96□□□□□ -0.01
DDX39A-219ENST00000592927 HHIPL1Q96JK4 782 aa14.96□□□□□ -0.01
DDX39A-219ENST00000592927 SRCIN1Q9C0H9 1055 aa14.96□□□□□ -0.01
DDX39A-219ENST00000592927 IBTKQ9P2D0 1353 aaPredicted RBP14.96□□□□□ -0.02
DDX39A-219ENST00000592927 ALDH1L1O75891 902 aa14.95□□□□□ -0.02
DDX39A-219ENST00000592927 NTSR2O95665 410 aa14.95□□□□□ -0.02
DDX39A-219ENST00000592927 USP50Q70EL3 339 aaPredicted RBP14.95□□□□□ -0.02
DDX39A-219ENST00000592927 NUTM1Q86Y26 1132 aa14.95□□□□□ -0.02
DDX39A-219ENST00000592927 RTKN2Q8IZC4 609 aa14.95□□□□□ -0.02
DDX39A-219ENST00000592927 SH3TC1Q8TE82 1336 aa14.94□□□□□ -0.02
DDX39A-219ENST00000592927 CCT4P50991 539 aaKnown RBP14.94□□□□□ -0.02
DDX39A-219ENST00000592927 SCNN1DP51172 638 aa14.94□□□□□ -0.02
DDX39A-219ENST00000592927 EIF6P56537 245 aaKnown RBP14.94□□□□□ -0.02
DDX39A-219ENST00000592927 GCKRQ14397 625 aa14.94□□□□□ -0.02
DDX39A-219ENST00000592927 ZBTB38Q8NAP3 1195 aaPredicted RBP14.94□□□□□ -0.02
DDX39A-219ENST00000592927 JDP2Q8WYK2 163 aa14.94□□□□□ -0.02
DDX39A-219ENST00000592927 CLUAP1Q96AJ1 413 aa14.94□□□□□ -0.02
DDX39A-219ENST00000592927 ANKRD36CQ5JPF3 1778 aa14.93□□□□□ -0.02
DDX39A-219ENST00000592927 NOGQ13253 232 aa14.93□□□□□ -0.02
DDX39A-219ENST00000592927 RTL5Q5HYW3 569 aaPredicted RBP14.93□□□□□ -0.02
DDX39A-219ENST00000592927 PANK1Q8TE04 598 aa14.93□□□□□ -0.02
DDX39A-219ENST00000592927 FAM89AQ96GI7 184 aa14.93□□□□□ -0.02
DDX39A-219ENST00000592927 CHMP4BQ9H444 224 aaKnown RBP14.93□□□□□ -0.02
DDX39A-219ENST00000592927 ABCC4O15439 1325 aa14.92□□□□□ -0.02
DDX39A-219ENST00000592927 PCCAP05165 728 aaPredicted RBP14.92□□□□□ -0.02
DDX39A-219ENST00000592927 HSP90B1P14625 803 aaKnown RBP14.92□□□□□ -0.02
DDX39A-219ENST00000592927 NPR1P16066 1061 aa14.92□□□□□ -0.02
DDX39A-219ENST00000592927 MVPQ14764 893 aaKnown RBP14.92□□□□□ -0.02
DDX39A-219ENST00000592927 ZNF408Q9H9D4 720 aa14.92□□□□□ -0.02
DDX39A-219ENST00000592927 C9orf78Q9NZ63 289 aaPredicted RBP14.92□□□□□ -0.02
DDX39A-219ENST00000592927 DDX19BQ9UMR2 479 aa14.92□□□□□ -0.02
DDX39A-219ENST00000592927 TNNQ9UQP3 1299 aa14.92□□□□□ -0.02
DDX39A-219ENST00000592927 RLBP1P12271 317 aa14.91□□□□□ -0.02
DDX39A-219ENST00000592927 SLC10A5Q5PT55 438 aa14.91□□□□□ -0.02
DDX39A-219ENST00000592927 INTS3Q68E01 1043 aaKnown RBP14.91□□□□□ -0.02
DDX39A-219ENST00000592927 UBE3BQ7Z3V4 1068 aa14.91□□□□□ -0.02
DDX39A-219ENST00000592927 JARID2Q92833 1246 aaPredicted RBP14.91□□□□□ -0.02
DDX39A-219ENST00000592927 COG6Q9Y2V7 657 aa14.91□□□□□ -0.02
DDX39A-219ENST00000592927 ABCC12Q96J65 1359 aa14.9□□□□□ -0.02
DDX39A-219ENST00000592927 H7C1W4 665 aa14.9□□□□□ -0.02
DDX39A-219ENST00000592927 GRM8O00222 908 aa14.9□□□□□ -0.02
DDX39A-219ENST00000592927 IRS4O14654 1257 aaPredicted RBP14.9□□□□□ -0.02
DDX39A-219ENST00000592927 HCLS1P14317 486 aaPredicted RBP14.9□□□□□ -0.02
DDX39A-219ENST00000592927 CCDC136Q96JN2 1154 aa14.9□□□□□ -0.02
DDX39A-219ENST00000592927 NLRP3Q96P20 1036 aa14.9□□□□□ -0.02
DDX39A-219ENST00000592927 GLIS2Q9BZE0 524 aaPredicted RBP14.9□□□□□ -0.02
DDX39A-219ENST00000592927 TRPA1O75762 1119 aa14.89□□□□□ -0.03
DDX39A-219ENST00000592927 CTU1Q7Z7A3 348 aaKnown RBP14.89□□□□□ -0.03
DDX39A-219ENST00000592927 TMEM57Q8N5G2 664 aa14.89□□□□□ -0.03
DDX39A-219ENST00000592927 SAGE1Q9NXZ1 904 aa14.89□□□□□ -0.03
DDX39A-219ENST00000592927 HPS5Q9UPZ3 1129 aa14.89□□□□□ -0.03
DDX39A-219ENST00000592927 CDHR2Q9BYE9 1310 aa14.89□□□□□ -0.03
DDX39A-219ENST00000592927 ADARB2Q9NS39 739 aaKnown RBP14.88□□□□□ -0.03
DDX39A-219ENST00000592927 RIC1Q4ADV7 1423 aa14.88□□□□□ -0.03
DDX39A-219ENST00000592927 KLRG2A4D1S0 409 aaPredicted RBP14.87□□□□□ -0.03
DDX39A-219ENST00000592927 PDE8AO60658 829 aa14.87□□□□□ -0.03
DDX39A-219ENST00000592927 NBPF7P0C2Y1 421 aaPredicted RBP14.87□□□□□ -0.03
DDX39A-219ENST00000592927 CASP7P55210 303 aa14.87□□□□□ -0.03
DDX39A-219ENST00000592927 HUNKP57058 714 aa14.87□□□□□ -0.03
DDX39A-219ENST00000592927 ITPRIPQ8IWB1 547 aa14.87□□□□□ -0.03
DDX39A-219ENST00000592927 PSMD1Q99460 953 aa14.87□□□□□ -0.03
DDX39A-219ENST00000592927 USP44Q9H0E7 712 aa14.87□□□□□ -0.03
DDX39A-219ENST00000592927 RNF186Q9NXI6 227 aa14.87□□□□□ -0.03
DDX39A-219ENST00000592927 UTYO14607 1347 aa14.87□□□□□ -0.03
DDX39A-219ENST00000592927 KIF23Q02241 960 aaPredicted RBP14.86□□□□□ -0.03
DDX39A-219ENST00000592927 B4GALNT3Q6L9W6 998 aa14.86□□□□□ -0.03
DDX39A-219ENST00000592927 C3orf67Q6ZVT6 689 aa14.86□□□□□ -0.03
DDX39A-219ENST00000592927 RPGRQ92834 1020 aaKnown RBP14.86□□□□□ -0.03
DDX39A-219ENST00000592927 CACNA1SQ13698 1873 aa14.85□□□□□ -0.03
DDX39A-219ENST00000592927 GNAI3P08754 354 aa14.85□□□□□ -0.03
DDX39A-219ENST00000592927 UBTFL1P0CB47 393 aaPredicted RBP14.85□□□□□ -0.03
DDX39A-219ENST00000592927 ALDH1B1P30837 517 aa14.85□□□□□ -0.03
DDX39A-219ENST00000592927 FXR1P51114 621 aaKnown RBP eCLIP14.85□□□□□ -0.03
DDX39A-219ENST00000592927 SF3B3Q15393 1217 aaKnown RBP14.85□□□□□ -0.03
DDX39A-219ENST00000592927 CRY2Q49AN0 593 aa14.85□□□□□ -0.03
DDX39A-219ENST00000592927 LARGE2Q8N3Y3 721 aa14.85□□□□□ -0.03
DDX39A-219ENST00000592927 PLA2G12BQ9BX93 195 aa14.85□□□□□ -0.03
DDX39A-219ENST00000592927 GPRC5DQ9NZD1 345 aa14.85□□□□□ -0.03
DDX39A-219ENST00000592927 HDAC5Q9UQL6 1122 aa14.85□□□□□ -0.03
DDX39A-219ENST00000592927 TRPM7Q96QT4 1865 aa14.84□□□□□ -0.03
DDX39A-219ENST00000592927 COL4A5P29400 1685 aa14.84□□□□□ -0.03
DDX39A-219ENST00000592927 FAM155AB1AL88 458 aaPredicted RBP14.84□□□□□ -0.03
DDX39A-219ENST00000592927 CTSWP56202 376 aa14.84□□□□□ -0.03
DDX39A-219ENST00000592927 CCDC152Q4G0S7 254 aa14.84□□□□□ -0.03
DDX39A-219ENST00000592927 RBM17Q96I25 401 aaKnown RBP14.84□□□□□ -0.03
DDX39A-219ENST00000592927 MEIS3Q99687 375 aa14.84□□□□□ -0.03
DDX39A-219ENST00000592927 PGAP2Q9UHJ9 254 aa14.84□□□□□ -0.03
DDX39A-219ENST00000592927 DLL1O00548 723 aa14.83□□□□□ -0.04
DDX39A-219ENST00000592927 RGMBQ6NW40 437 aa14.83□□□□□ -0.04
DDX39A-219ENST00000592927 DDX46Q7L014 1031 aaKnown RBP14.83□□□□□ -0.04
DDX39A-219ENST00000592927 CDC37L1Q7L3B6 337 aa14.83□□□□□ -0.04
DDX39A-219ENST00000592927 SUCLG2Q96I99 432 aa14.83□□□□□ -0.04
DDX39A-219ENST00000592927 ZBTB7BO15156 539 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms