RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 AIMP1Q12904 312 aaKnown RBP13.32□□□□□ -0.28
SMCO4P1-201ENST00000592909 SCARF1Q14162 830 aa13.32□□□□□ -0.28
SMCO4P1-201ENST00000592909 FBXO46Q6PJ61 603 aaPredicted RBP13.32□□□□□ -0.28
SMCO4P1-201ENST00000592909 TBC1D16Q8TBP0 767 aa13.32□□□□□ -0.28
SMCO4P1-201ENST00000592909 NECTIN2Q92692 538 aa13.32□□□□□ -0.28
SMCO4P1-201ENST00000592909 ANKRD36CQ5JPF3 1778 aa13.32□□□□□ -0.28
SMCO4P1-201ENST00000592909 GPR25O00155 361 aa13.31□□□□□ -0.28
SMCO4P1-201ENST00000592909 TM4SF4P48230 202 aa13.31□□□□□ -0.28
SMCO4P1-201ENST00000592909 ANGEL2Q5VTE6 544 aaKnown RBP13.31□□□□□ -0.28
SMCO4P1-201ENST00000592909 AGBL3Q8NEM8 1001 aa13.31□□□□□ -0.28
SMCO4P1-201ENST00000592909 CCER1Q8TC90 406 aaPredicted RBP13.31□□□□□ -0.28
SMCO4P1-201ENST00000592909 ZC3H12CQ9C0D7 883 aaKnown RBP13.31□□□□□ -0.28
SMCO4P1-201ENST00000592909 ZNF609O15014 1411 aa13.3□□□□□ -0.28
SMCO4P1-201ENST00000592909 RPS8P62241 208 aaKnown RBP13.3□□□□□ -0.28
SMCO4P1-201ENST00000592909 PNNQ9H307 717 aaKnown RBP13.3□□□□□ -0.28
SMCO4P1-201ENST00000592909 PODXL2Q9NZ53 605 aa13.3□□□□□ -0.28
SMCO4P1-201ENST00000592909 AKAP11Q9UKA4 1901 aa13.3□□□□□ -0.28
SMCO4P1-201ENST00000592909 POLR2AP24928 1970 aaKnown RBP13.3□□□□□ -0.28
SMCO4P1-201ENST00000592909 PITPNM2Q9BZ72 1349 aa13.3□□□□□ -0.28
SMCO4P1-201ENST00000592909 LRRC37AA6NMS7 1700 aa13.3□□□□□ -0.28
SMCO4P1-201ENST00000592909 HABP4Q5JVS0 413 aaKnown RBP13.29□□□□□ -0.28
SMCO4P1-201ENST00000592909 RSBN1LQ6PCB5 846 aaPredicted RBP13.29□□□□□ -0.28
SMCO4P1-201ENST00000592909 FAM89AQ96GI7 184 aa13.29□□□□□ -0.28
SMCO4P1-201ENST00000592909 GMLQ99445 158 aa13.29□□□□□ -0.28
SMCO4P1-201ENST00000592909 ISCA1Q9BUE6 129 aa13.29□□□□□ -0.28
SMCO4P1-201ENST00000592909 CFHR5Q9BXR6 569 aa13.29□□□□□ -0.28
SMCO4P1-201ENST00000592909 LAMB2P55268 1798 aa13.29□□□□□ -0.28
SMCO4P1-201ENST00000592909 UBE2Q2LH0YL09 131 aa13.28□□□□□ -0.28
SMCO4P1-201ENST00000592909 MOB2Q70IA6 237 aa13.28□□□□□ -0.28
SMCO4P1-201ENST00000592909 PLBD2Q8NHP8 589 aa13.28□□□□□ -0.28
SMCO4P1-201ENST00000592909 MYOZ2Q9NPC6 264 aa13.28□□□□□ -0.28
SMCO4P1-201ENST00000592909 MAPK8IP3Q9UPT6 1336 aa13.28□□□□□ -0.28
SMCO4P1-201ENST00000592909 G3V3G9 751 aa13.27□□□□□ -0.29
SMCO4P1-201ENST00000592909 USP17L8P0C7I0 530 aa13.27□□□□□ -0.29
SMCO4P1-201ENST00000592909 TRIM28Q13263 835 aaKnown RBP13.27□□□□□ -0.29
SMCO4P1-201ENST00000592909 DCAF8Q5TAQ9 597 aa13.27□□□□□ -0.29
SMCO4P1-201ENST00000592909 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.29
SMCO4P1-201ENST00000592909 ZNF428Q96B54 188 aa13.27□□□□□ -0.29
SMCO4P1-201ENST00000592909 PAPPA2Q9BXP8 1791 aa13.27□□□□□ -0.29
SMCO4P1-201ENST00000592909 FKTNO75072 461 aa13.26□□□□□ -0.29
SMCO4P1-201ENST00000592909 UFL1O94874 794 aa13.26□□□□□ -0.29
SMCO4P1-201ENST00000592909 GGA1Q9UJY5 639 aa13.26□□□□□ -0.29
SMCO4P1-201ENST00000592909 TAF1P21675 1872 aa13.25□□□□□ -0.29
SMCO4P1-201ENST00000592909 ATP5J2-PTCD1G3V325 749 aa13.25□□□□□ -0.29
SMCO4P1-201ENST00000592909 IRS4O14654 1257 aaPredicted RBP13.25□□□□□ -0.29
SMCO4P1-201ENST00000592909 RIPK4P57078 832 aa13.25□□□□□ -0.29
SMCO4P1-201ENST00000592909 SREBF2Q12772 1141 aa13.25□□□□□ -0.29
SMCO4P1-201ENST00000592909 ANKIB1Q9P2G1 1089 aa13.25□□□□□ -0.29
SMCO4P1-201ENST00000592909 DLG5Q8TDM6 1919 aa13.25□□□□□ -0.29
SMCO4P1-201ENST00000592909 PRAMEF18Q5VWM3 479 aa13.24□□□□□ -0.29
SMCO4P1-201ENST00000592909 INTS3Q68E01 1043 aaKnown RBP13.24□□□□□ -0.29
SMCO4P1-201ENST00000592909 PODNQ7Z5L7 613 aa13.24□□□□□ -0.29
SMCO4P1-201ENST00000592909 R3HDMLQ9H3Y0 253 aa13.24□□□□□ -0.29
SMCO4P1-201ENST00000592909 CHPF2Q9P2E5 772 aa13.24□□□□□ -0.29
SMCO4P1-201ENST00000592909 SCAF8Q9UPN6 1271 aaKnown RBP13.24□□□□□ -0.29
SMCO4P1-201ENST00000592909 USP17L3A6NCW0 530 aa13.23□□□□□ -0.29
SMCO4P1-201ENST00000592909 USP17L4A6NCW7 530 aa13.23□□□□□ -0.29
SMCO4P1-201ENST00000592909 CHL1O00533 1208 aa13.23□□□□□ -0.29
SMCO4P1-201ENST00000592909 NF2P35240 595 aa13.23□□□□□ -0.29
SMCO4P1-201ENST00000592909 LMOD3Q0VAK6 560 aa13.23□□□□□ -0.29
SMCO4P1-201ENST00000592909 TTLL12Q14166 644 aaPredicted RBP13.23□□□□□ -0.29
SMCO4P1-201ENST00000592909 RTL5Q5HYW3 569 aaPredicted RBP13.23□□□□□ -0.29
SMCO4P1-201ENST00000592909 USP17L1Q7RTZ2 530 aa13.23□□□□□ -0.29
SMCO4P1-201ENST00000592909 SEC31BQ9NQW1 1179 aa13.23□□□□□ -0.29
SMCO4P1-201ENST00000592909 COL4A1P02462 1669 aa13.23□□□□□ -0.29
SMCO4P1-201ENST00000592909 SCN9AQ15858 1988 aa13.23□□□□□ -0.29
SMCO4P1-201ENST00000592909 ALDH1A1P00352 501 aa13.22□□□□□ -0.29
SMCO4P1-201ENST00000592909 HOXB7P09629 217 aa13.22□□□□□ -0.29
SMCO4P1-201ENST00000592909 HSP90B1P14625 803 aaKnown RBP13.22□□□□□ -0.29
SMCO4P1-201ENST00000592909 KRT24Q2M2I5 525 aa13.22□□□□□ -0.29
SMCO4P1-201ENST00000592909 NBPF9Q3BBW0 867 aa13.22□□□□□ -0.29
SMCO4P1-201ENST00000592909 ZBTB38Q8NAP3 1195 aaPredicted RBP13.22□□□□□ -0.29
SMCO4P1-201ENST00000592909 DBF4Q9UBU7 674 aaPredicted RBP13.22□□□□□ -0.29
SMCO4P1-201ENST00000592909 DDX60Q8IY21 1712 aaKnown RBP13.22□□□□□ -0.29
SMCO4P1-201ENST00000592909 XDHP47989 1333 aa13.21□□□□□ -0.29
SMCO4P1-201ENST00000592909 POTEFA5A3E0 1075 aa13.21□□□□□ -0.29
SMCO4P1-201ENST00000592909 ATP2B4P23634 1241 aa13.21□□□□□ -0.29
SMCO4P1-201ENST00000592909 TMPOP42166 694 aaKnown RBP13.21□□□□□ -0.29
SMCO4P1-201ENST00000592909 MMP14P50281 582 aa13.21□□□□□ -0.29
SMCO4P1-201ENST00000592909 PTPN12Q05209 780 aaKnown RBP13.21□□□□□ -0.29
SMCO4P1-201ENST00000592909 MKRN3Q13064 507 aaKnown RBP13.21□□□□□ -0.29
SMCO4P1-201ENST00000592909 LDLRAD1Q5T700 205 aa13.21□□□□□ -0.29
SMCO4P1-201ENST00000592909 HDGFL1Q5TGJ6 251 aa13.21□□□□□ -0.29
SMCO4P1-201ENST00000592909 SPRYD7Q5W111 196 aa13.21□□□□□ -0.29
SMCO4P1-201ENST00000592909 ARMC9Q7Z3E5 817 aa13.21□□□□□ -0.29
SMCO4P1-201ENST00000592909 WNT10BO00744 389 aa13.2□□□□□ -0.3
SMCO4P1-201ENST00000592909 FXR1P51114 621 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMCO4P1-201ENST00000592909 INHBEP58166 350 aa13.2□□□□□ -0.3
SMCO4P1-201ENST00000592909 CCDC152Q4G0S7 254 aa13.2□□□□□ -0.3
SMCO4P1-201ENST00000592909 OTOP1Q7RTM1 612 aa13.2□□□□□ -0.3
SMCO4P1-201ENST00000592909 OGFOD1Q8N543 542 aa13.2□□□□□ -0.3
SMCO4P1-201ENST00000592909 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
SMCO4P1-201ENST00000592909 TRIM17Q9Y577 477 aa13.2□□□□□ -0.3
SMCO4P1-201ENST00000592909 MANSC4A6NHS7 340 aaPredicted RBP13.19□□□□□ -0.3
SMCO4P1-201ENST00000592909 DACT2Q5SW24 774 aa13.19□□□□□ -0.3
SMCO4P1-201ENST00000592909 MYO3BQ8WXR4 1341 aa13.18□□□□□ -0.3
SMCO4P1-201ENST00000592909 PDE8AO60658 829 aa13.18□□□□□ -0.3
SMCO4P1-201ENST00000592909 STRIP1Q5VSL9 837 aa13.18□□□□□ -0.3
SMCO4P1-201ENST00000592909 IFNL1Q8IU54 200 aa13.18□□□□□ -0.3
SMCO4P1-201ENST00000592909 ANKRD18AQ8IVF6 992 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms