RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 ANKRD18AQ8IVF6 992 aa18.96■□□□□ 0.63
SF3A2-207ENST00000592839 DPF2Q92785 391 aa18.96■□□□□ 0.63
SF3A2-207ENST00000592839 ADARB2Q9NS39 739 aaKnown RBP18.96■□□□□ 0.63
SF3A2-207ENST00000592839 SPEF2Q9C093 1822 aa18.95■□□□□ 0.62
SF3A2-207ENST00000592839 EPS15P42566 896 aa18.95■□□□□ 0.62
SF3A2-207ENST00000592839 SLFN5Q08AF3 891 aa18.95■□□□□ 0.62
SF3A2-207ENST00000592839 UBE3BQ7Z3V4 1068 aa18.95■□□□□ 0.62
SF3A2-207ENST00000592839 GREM2Q9H772 168 aa18.95■□□□□ 0.62
SF3A2-207ENST00000592839 TRPM7Q96QT4 1865 aa18.94■□□□□ 0.62
SF3A2-207ENST00000592839 MED23Q9ULK4 1368 aa18.94■□□□□ 0.62
SF3A2-207ENST00000592839 RPS12P25398 132 aaKnown RBP18.94■□□□□ 0.62
SF3A2-207ENST00000592839 ZC3H15Q8WU90 426 aaKnown RBP18.94■□□□□ 0.62
SF3A2-207ENST00000592839 GJA3Q9Y6H8 435 aa18.94■□□□□ 0.62
SF3A2-207ENST00000592839 ALDH1L1O75891 902 aa18.93■□□□□ 0.62
SF3A2-207ENST00000592839 GGA1Q9UJY5 639 aa18.93■□□□□ 0.62
SF3A2-207ENST00000592839 UTYO14607 1347 aa18.93■□□□□ 0.62
SF3A2-207ENST00000592839 THSD7BQ9C0I4 1608 aa18.92■□□□□ 0.62
SF3A2-207ENST00000592839 CT47B1P0C2W7 299 aaPredicted RBP18.92■□□□□ 0.62
SF3A2-207ENST00000592839 HSPA1AP0DMV8 641 aaKnown RBP18.92■□□□□ 0.62
SF3A2-207ENST00000592839 HSPA1BP0DMV9 641 aaKnown RBP18.92■□□□□ 0.62
SF3A2-207ENST00000592839 ATP2B4P23634 1241 aa18.92■□□□□ 0.62
SF3A2-207ENST00000592839 GMPSP49915 693 aaPredicted RBP18.92■□□□□ 0.62
SF3A2-207ENST00000592839 TNS4Q8IZW8 715 aa18.92■□□□□ 0.62
SF3A2-207ENST00000592839 CNTROBQ8N137 903 aa18.92■□□□□ 0.62
SF3A2-207ENST00000592839 JARID2Q92833 1246 aaPredicted RBP18.92■□□□□ 0.62
SF3A2-207ENST00000592839 MINPP1Q9UNW1 487 aa18.92■□□□□ 0.62
SF3A2-207ENST00000592839 PTPRCP08575 1304 aa18.92■□□□□ 0.62
SF3A2-207ENST00000592839 CNTNAP1P78357 1384 aa18.92■□□□□ 0.62
SF3A2-207ENST00000592839 C6orf229H3BNL8 230 aa18.91■□□□□ 0.62
SF3A2-207ENST00000592839 ECE2O60344 883 aa18.91■□□□□ 0.62
SF3A2-207ENST00000592839 EAPPQ56P03 285 aaPredicted RBP18.91■□□□□ 0.62
SF3A2-207ENST00000592839 F6X3S4 739 aa18.9■□□□□ 0.62
SF3A2-207ENST00000592839 GRM8O00222 908 aa18.9■□□□□ 0.62
SF3A2-207ENST00000592839 UFL1O94874 794 aa18.9■□□□□ 0.62
SF3A2-207ENST00000592839 VIL1P09327 827 aaKnown RBP18.9■□□□□ 0.62
SF3A2-207ENST00000592839 BRPF1P55201 1214 aaPredicted RBP18.9■□□□□ 0.62
SF3A2-207ENST00000592839 FOXO4P98177 505 aa18.9■□□□□ 0.62
SF3A2-207ENST00000592839 ALDH1L2Q3SY69 923 aa18.9■□□□□ 0.62
SF3A2-207ENST00000592839 MRPL50Q8N5N7 158 aaKnown RBP18.9■□□□□ 0.62
SF3A2-207ENST00000592839 ZC3H12CQ9C0D7 883 aaKnown RBP18.9■□□□□ 0.62
SF3A2-207ENST00000592839 TMEM88BA6NKF7 163 aa18.89■□□□□ 0.61
SF3A2-207ENST00000592839 PSMD14O00487 310 aa18.89■□□□□ 0.61
SF3A2-207ENST00000592839 RAD17O75943 681 aa18.89■□□□□ 0.61
SF3A2-207ENST00000592839 ITGA6P23229 1130 aa18.89■□□□□ 0.61
SF3A2-207ENST00000592839 FAM161AQ3B820 660 aa18.89■□□□□ 0.61
SF3A2-207ENST00000592839 PODNQ7Z5L7 613 aa18.89■□□□□ 0.61
SF3A2-207ENST00000592839 DBNDD1Q9H9R9 158 aa18.89■□□□□ 0.61
SF3A2-207ENST00000592839 ANKIB1Q9P2G1 1089 aa18.89■□□□□ 0.61
SF3A2-207ENST00000592839 CLEC11AQ9Y240 323 aa18.89■□□□□ 0.61
SF3A2-207ENST00000592839 LEMD3Q9Y2U8 911 aa18.89■□□□□ 0.61
SF3A2-207ENST00000592839 RASSF10A6NK89 507 aa18.88■□□□□ 0.61
SF3A2-207ENST00000592839 MAP1SQ66K74 1059 aaPredicted RBP18.88■□□□□ 0.61
SF3A2-207ENST00000592839 MKRN1Q9UHC7 482 aaKnown RBP18.88■□□□□ 0.61
SF3A2-207ENST00000592839 IRS2Q9Y4H2 1338 aa18.88■□□□□ 0.61
SF3A2-207ENST00000592839 IGHMBP2P38935 993 aaKnown RBP18.87■□□□□ 0.61
SF3A2-207ENST00000592839 CCT4P50991 539 aaKnown RBP18.87■□□□□ 0.61
SF3A2-207ENST00000592839 HIRAP54198 1017 aaPredicted RBP18.87■□□□□ 0.61
SF3A2-207ENST00000592839 C15orf52Q6ZUT6 534 aaKnown RBP18.87■□□□□ 0.61
SF3A2-207ENST00000592839 AGBL3Q8NEM8 1001 aa18.87■□□□□ 0.61
SF3A2-207ENST00000592839 CCDC85AQ96PX6 553 aaPredicted RBP18.87■□□□□ 0.61
SF3A2-207ENST00000592839 GMLQ99445 158 aa18.87■□□□□ 0.61
SF3A2-207ENST00000592839 CNOT7Q9UIV1 285 aaKnown RBP18.87■□□□□ 0.61
SF3A2-207ENST00000592839 SRCIN1Q9C0H9 1055 aa18.86■□□□□ 0.61
SF3A2-207ENST00000592839 ANKRD2Q9GZV1 360 aa18.86■□□□□ 0.61
SF3A2-207ENST00000592839 RIMBP2O15034 1052 aa18.85■□□□□ 0.61
SF3A2-207ENST00000592839 CAPN15O75808 1086 aa18.85■□□□□ 0.61
SF3A2-207ENST00000592839 MMP14P50281 582 aa18.85■□□□□ 0.61
SF3A2-207ENST00000592839 ZNF280AP59817 542 aaPredicted RBP18.85■□□□□ 0.61
SF3A2-207ENST00000592839 RABL6Q3YEC7 729 aaPredicted RBP18.85■□□□□ 0.61
SF3A2-207ENST00000592839 MICALL2Q8IY33 904 aa18.85■□□□□ 0.61
SF3A2-207ENST00000592839 TRPM4Q8TD43 1214 aa18.85■□□□□ 0.61
SF3A2-207ENST00000592839 SSH1Q8WYL5 1049 aa18.85■□□□□ 0.61
SF3A2-207ENST00000592839 GPR101Q96P66 508 aaPredicted RBP18.85■□□□□ 0.61
SF3A2-207ENST00000592839 BCL2L13Q9BXK5 485 aa18.85■□□□□ 0.61
SF3A2-207ENST00000592839 ANKRD18BA2A2Z9 1011 aa18.84■□□□□ 0.61
SF3A2-207ENST00000592839 H7C1D1 291 aa18.84■□□□□ 0.61
SF3A2-207ENST00000592839 KAZALD1Q96I82 304 aa18.84■□□□□ 0.61
SF3A2-207ENST00000592839 COA1Q9GZY4 146 aa18.84■□□□□ 0.61
SF3A2-207ENST00000592839 DOK7Q18PE1 504 aa18.83■□□□□ 0.6
SF3A2-207ENST00000592839 EPHA10Q5JZY3 1008 aa18.83■□□□□ 0.6
SF3A2-207ENST00000592839 RSBN1LQ6PCB5 846 aaPredicted RBP18.83■□□□□ 0.6
SF3A2-207ENST00000592839 HHIPL1Q96JK4 782 aa18.83■□□□□ 0.6
SF3A2-207ENST00000592839 KCNQ5Q9NR82 932 aa18.83■□□□□ 0.6
SF3A2-207ENST00000592839 ZBTB12Q9Y330 459 aaPredicted RBP18.83■□□□□ 0.6
SF3A2-207ENST00000592839 ZNF804BA4D1E1 1349 aa18.82■□□□□ 0.6
SF3A2-207ENST00000592839 MYO3BQ8WXR4 1341 aa18.82■□□□□ 0.6
SF3A2-207ENST00000592839 IFIT5Q13325 482 aaKnown RBP18.82■□□□□ 0.6
SF3A2-207ENST00000592839 CDCA7LQ96GN5 454 aa18.82■□□□□ 0.6
SF3A2-207ENST00000592839 MPHOSPH8Q99549 860 aa18.82■□□□□ 0.6
SF3A2-207ENST00000592839 SHTN1A0MZ66 631 aa18.81■□□□□ 0.6
SF3A2-207ENST00000592839 CHRNDQ07001 517 aa18.81■□□□□ 0.6
SF3A2-207ENST00000592839 STRIP1Q5VSL9 837 aa18.81■□□□□ 0.6
SF3A2-207ENST00000592839 CST9Q5W186 159 aa18.81■□□□□ 0.6
SF3A2-207ENST00000592839 CDC37L1Q7L3B6 337 aa18.81■□□□□ 0.6
SF3A2-207ENST00000592839 POLR2AP24928 1970 aaKnown RBP18.81■□□□□ 0.6
SF3A2-207ENST00000592839 USP17L3A6NCW0 530 aa18.8■□□□□ 0.6
SF3A2-207ENST00000592839 USP17L4A6NCW7 530 aa18.8■□□□□ 0.6
SF3A2-207ENST00000592839 WTIPA6NIX2 430 aaPredicted RBP18.8■□□□□ 0.6
SF3A2-207ENST00000592839 DACT2Q5SW24 774 aa18.8■□□□□ 0.6
SF3A2-207ENST00000592839 LMBR1LQ6UX01 489 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms