RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 TMEM87AQ8NBN3 555 aa17.06■□□□□ 0.32
RANBP3-229ENST00000592771 SMARCC1Q92922 1105 aaPredicted RBP17.06■□□□□ 0.32
RANBP3-229ENST00000592771 EDC3Q96F86 508 aaKnown RBP17.06■□□□□ 0.32
RANBP3-229ENST00000592771 TM6SF1Q9BZW5 370 aa17.06■□□□□ 0.32
RANBP3-229ENST00000592771 ZNF500O60304 480 aaPredicted RBP17.05■□□□□ 0.32
RANBP3-229ENST00000592771 OFD1O75665 1012 aa17.05■□□□□ 0.32
RANBP3-229ENST00000592771 ATP6V1AP38606 617 aa17.05■□□□□ 0.32
RANBP3-229ENST00000592771 CRKLP46109 303 aaKnown RBP17.05■□□□□ 0.32
RANBP3-229ENST00000592771 ITPK1Q13572 414 aa17.05■□□□□ 0.32
RANBP3-229ENST00000592771 UBN2Q6ZU65 1347 aa17.04■□□□□ 0.32
RANBP3-229ENST00000592771 SYNE4Q8N205 404 aa17.04■□□□□ 0.32
RANBP3-229ENST00000592771 TTLL11Q8NHH1 800 aa17.04■□□□□ 0.32
RANBP3-229ENST00000592771 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.04■□□□□ 0.32
RANBP3-229ENST00000592771 CEP126Q9P2H0 1117 aa17.04■□□□□ 0.32
RANBP3-229ENST00000592771 TBC1D2BQ9UPU7 963 aa17.04■□□□□ 0.32
RANBP3-229ENST00000592771 RIC1Q4ADV7 1423 aa17.04■□□□□ 0.32
RANBP3-229ENST00000592771 A0A1B0GUL7 405 aa17.04■□□□□ 0.32
RANBP3-229ENST00000592771 RRP9O43818 475 aaKnown RBP17.04■□□□□ 0.32
RANBP3-229ENST00000592771 CTSWP56202 376 aa17.04■□□□□ 0.32
RANBP3-229ENST00000592771 TIMM10P62072 90 aa17.04■□□□□ 0.32
RANBP3-229ENST00000592771 IFIT5Q13325 482 aaKnown RBP17.04■□□□□ 0.32
RANBP3-229ENST00000592771 ILDR1Q86SU0 546 aaPredicted RBP17.04■□□□□ 0.32
RANBP3-229ENST00000592771 RBM8AQ9Y5S9 174 aaKnown RBP17.04■□□□□ 0.32
RANBP3-229ENST00000592771 LRP5O75197 1615 aa17.04■□□□□ 0.32
RANBP3-229ENST00000592771 FAM98CQ17RN3 349 aaKnown RBP17.03■□□□□ 0.32
RANBP3-229ENST00000592771 KBTBD3Q8NAB2 608 aa17.03■□□□□ 0.32
RANBP3-229ENST00000592771 NEUROD6Q96NK8 337 aa17.03■□□□□ 0.32
RANBP3-229ENST00000592771 RBM27Q9P2N5 1060 aaKnown RBP17.03■□□□□ 0.32
RANBP3-229ENST00000592771 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.03■□□□□ 0.32
RANBP3-229ENST00000592771 THSD7AQ9UPZ6 1657 aa17.03■□□□□ 0.32
RANBP3-229ENST00000592771 IRS4O14654 1257 aaPredicted RBP17.02■□□□□ 0.32
RANBP3-229ENST00000592771 LETM1O95202 739 aaPredicted RBP17.02■□□□□ 0.32
RANBP3-229ENST00000592771 PDIA4P13667 645 aaKnown RBP17.02■□□□□ 0.32
RANBP3-229ENST00000592771 PRPF40BQ6NWY9 871 aaKnown RBP17.02■□□□□ 0.32
RANBP3-229ENST00000592771 AK7Q96M32 723 aa17.02■□□□□ 0.32
RANBP3-229ENST00000592771 CCDC39Q9UFE4 941 aa17.02■□□□□ 0.32
RANBP3-229ENST00000592771 TRMT112Q9UI30 125 aaKnown RBP17.02■□□□□ 0.32
RANBP3-229ENST00000592771 AKAP2Q9Y2D5 859 aa17.02■□□□□ 0.32
RANBP3-229ENST00000592771 BCORQ6W2J9 1755 aa17.02■□□□□ 0.31
RANBP3-229ENST00000592771 SYCE3A1L190 88 aa17.02■□□□□ 0.31
RANBP3-229ENST00000592771 PDE8AO60658 829 aa17.02■□□□□ 0.31
RANBP3-229ENST00000592771 CAMTA2O94983 1202 aa17.02■□□□□ 0.31
RANBP3-229ENST00000592771 CREB3L3Q68CJ9 461 aa17.02■□□□□ 0.31
RANBP3-229ENST00000592771 ZNF589Q86UQ0 364 aaPredicted RBP17.02■□□□□ 0.31
RANBP3-229ENST00000592771 FAM184AQ8NB25 1140 aa17.02■□□□□ 0.31
RANBP3-229ENST00000592771 UBE2Q2Q8WVN8 375 aa17.02■□□□□ 0.31
RANBP3-229ENST00000592771 DNAJC2Q99543 621 aaKnown RBP17.02■□□□□ 0.31
RANBP3-229ENST00000592771 TSPY26PQ9H489 355 aa17.02■□□□□ 0.31
RANBP3-229ENST00000592771 ZSWIM6Q9HCJ5 1215 aa17.02■□□□□ 0.31
RANBP3-229ENST00000592771 RIPOR2Q9Y4F9 1068 aa17.02■□□□□ 0.31
RANBP3-229ENST00000592771 ATP6V1DQ9Y5K8 247 aa17.02■□□□□ 0.31
RANBP3-229ENST00000592771 RPAP1Q9BWH6 1393 aaPredicted RBP17.01■□□□□ 0.31
RANBP3-229ENST00000592771 KCNQ2O43526 872 aa17.01■□□□□ 0.31
RANBP3-229ENST00000592771 TAF5LO75529 589 aa17.01■□□□□ 0.31
RANBP3-229ENST00000592771 UVSSAQ2YD98 709 aa17.01■□□□□ 0.31
RANBP3-229ENST00000592771 USPL1Q5W0Q7 1092 aa17.01■□□□□ 0.31
RANBP3-229ENST00000592771 GREM2Q9H772 168 aa17.01■□□□□ 0.31
RANBP3-229ENST00000592771 LIMCH1Q9UPQ0 1083 aa17.01■□□□□ 0.31
RANBP3-229ENST00000592771 NDUFB9Q9Y6M9 179 aa17.01■□□□□ 0.31
RANBP3-229ENST00000592771 SH3TC1Q8TE82 1336 aa17■□□□□ 0.31
RANBP3-229ENST00000592771 LAMB2P55268 1798 aa17■□□□□ 0.31
RANBP3-229ENST00000592771 ITGA6P23229 1130 aa17■□□□□ 0.31
RANBP3-229ENST00000592771 PAG1Q9NWQ8 432 aa17■□□□□ 0.31
RANBP3-229ENST00000592771 A0A0G2JS52 829 aa17■□□□□ 0.31
RANBP3-229ENST00000592771 SLC27A2O14975 620 aa17■□□□□ 0.31
RANBP3-229ENST00000592771 ZKSCAN1P17029 563 aaPredicted RBP17■□□□□ 0.31
RANBP3-229ENST00000592771 CSPP1Q1MSJ5 1256 aa17■□□□□ 0.31
RANBP3-229ENST00000592771 TSGA10IPQ3SY00 556 aa17■□□□□ 0.31
RANBP3-229ENST00000592771 TAF7LQ5H9L4 462 aa17■□□□□ 0.31
RANBP3-229ENST00000592771 DDX46Q7L014 1031 aaKnown RBP17■□□□□ 0.31
RANBP3-229ENST00000592771 QTRT2Q9H974 415 aaKnown RBP17■□□□□ 0.31
RANBP3-229ENST00000592771 TRPC5Q9UL62 973 aaPredicted RBP17■□□□□ 0.31
RANBP3-229ENST00000592771 ZKSCAN5Q9Y2L8 839 aa17■□□□□ 0.31
RANBP3-229ENST00000592771 ABCC12Q96J65 1359 aa16.99■□□□□ 0.31
RANBP3-229ENST00000592771 ANKRD18BA2A2Z9 1011 aa16.99■□□□□ 0.31
RANBP3-229ENST00000592771 CASTP20810 708 aaKnown RBP16.99■□□□□ 0.31
RANBP3-229ENST00000592771 AK2P54819 239 aa16.99■□□□□ 0.31
RANBP3-229ENST00000592771 ADCK5Q3MIX3 580 aa16.99■□□□□ 0.31
RANBP3-229ENST00000592771 VPS53Q5VIR6 699 aa16.99■□□□□ 0.31
RANBP3-229ENST00000592771 ZSCAN31Q96LW9 406 aaPredicted RBP16.99■□□□□ 0.31
RANBP3-229ENST00000592771 CCDC85AQ96PX6 553 aaPredicted RBP16.99■□□□□ 0.31
RANBP3-229ENST00000592771 NSFL1CQ9UNZ2 370 aaKnown RBP16.99■□□□□ 0.31
RANBP3-229ENST00000592771 DDX60Q8IY21 1712 aaKnown RBP16.99■□□□□ 0.31
RANBP3-229ENST00000592771 IFIT1P09914 478 aaKnown RBP16.98■□□□□ 0.31
RANBP3-229ENST00000592771 MCMDC2Q4G0Z9 681 aa16.98■□□□□ 0.31
RANBP3-229ENST00000592771 PARP10Q53GL7 1025 aa16.98■□□□□ 0.31
RANBP3-229ENST00000592771 RUFY3Q7L099 469 aa16.98■□□□□ 0.31
RANBP3-229ENST00000592771 GJD4Q96KN9 370 aaPredicted RBP16.98■□□□□ 0.31
RANBP3-229ENST00000592771 JAKMIP1Q96N16 626 aaKnown RBP16.98■□□□□ 0.31
RANBP3-229ENST00000592771 HMG20BQ9P0W2 317 aa16.98■□□□□ 0.31
RANBP3-229ENST00000592771 GOLIM4O00461 696 aa16.98■□□□□ 0.31
RANBP3-229ENST00000592771 ZSCAN22P10073 491 aaPredicted RBP16.98■□□□□ 0.31
RANBP3-229ENST00000592771 RNF20Q5VTR2 975 aa16.98■□□□□ 0.31
RANBP3-229ENST00000592771 SUSD4Q5VX71 490 aa16.98■□□□□ 0.31
RANBP3-229ENST00000592771 VGLL2Q8N8G2 317 aa16.98■□□□□ 0.31
RANBP3-229ENST00000592771 XAGE2Q96GT9 111 aa16.98■□□□□ 0.31
RANBP3-229ENST00000592771 SH2B1Q9NRF2 756 aaPredicted RBP16.98■□□□□ 0.31
RANBP3-229ENST00000592771 NHSQ6T4R5 1651 aa16.97■□□□□ 0.31
RANBP3-229ENST00000592771 ADORA1P30542 326 aa16.97■□□□□ 0.31
RANBP3-229ENST00000592771 KCNJ4P48050 445 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms