RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 RTL5Q5HYW3 569 aaPredicted RBP25.61■■□□□ 1.69
PRKCSH-216ENST00000592445 DDX60Q8IY21 1712 aaKnown RBP25.6■■□□□ 1.69
PRKCSH-216ENST00000592445 G3V3G9 751 aa25.6■■□□□ 1.69
PRKCSH-216ENST00000592445 SOX10P56693 466 aa25.6■■□□□ 1.69
PRKCSH-216ENST00000592445 NEUROD2Q15784 382 aa25.6■■□□□ 1.69
PRKCSH-216ENST00000592445 DCAF8Q5TAQ9 597 aa25.6■■□□□ 1.69
PRKCSH-216ENST00000592445 HDGFL1Q5TGJ6 251 aa25.6■■□□□ 1.69
PRKCSH-216ENST00000592445 TBC1D16Q8TBP0 767 aa25.6■■□□□ 1.69
PRKCSH-216ENST00000592445 ISCA1Q9BUE6 129 aa25.6■■□□□ 1.69
PRKCSH-216ENST00000592445 ZC3H12CQ9C0D7 883 aaKnown RBP25.6■■□□□ 1.69
PRKCSH-216ENST00000592445 GGA3Q9NZ52 723 aa25.6■■□□□ 1.69
PRKCSH-216ENST00000592445 POLR2AP24928 1970 aaKnown RBP25.58■■□□□ 1.69
PRKCSH-216ENST00000592445 CHL1O00533 1208 aa25.58■■□□□ 1.69
PRKCSH-216ENST00000592445 IRS4O14654 1257 aaPredicted RBP25.58■■□□□ 1.69
PRKCSH-216ENST00000592445 SLC10A3P09131 477 aa25.58■■□□□ 1.69
PRKCSH-216ENST00000592445 RPS8P62241 208 aaKnown RBP25.58■■□□□ 1.69
PRKCSH-216ENST00000592445 VIL1P09327 827 aaKnown RBP25.57■■□□□ 1.68
PRKCSH-216ENST00000592445 CDCA5Q96FF9 252 aa25.57■■□□□ 1.68
PRKCSH-216ENST00000592445 CSRNP1Q96S65 589 aa25.57■■□□□ 1.68
PRKCSH-216ENST00000592445 DBF4Q9UBU7 674 aaPredicted RBP25.57■■□□□ 1.68
PRKCSH-216ENST00000592445 ANKIB1Q9P2G1 1089 aa25.56■■□□□ 1.68
PRKCSH-216ENST00000592445 ASTN2O75129 1339 aaPredicted RBP25.56■■□□□ 1.68
PRKCSH-216ENST00000592445 UFL1O94874 794 aa25.55■■□□□ 1.68
PRKCSH-216ENST00000592445 CTU1Q7Z7A3 348 aaKnown RBP25.54■■□□□ 1.68
PRKCSH-216ENST00000592445 CCDC146Q8IYE0 955 aa25.54■■□□□ 1.68
PRKCSH-216ENST00000592445 REM2Q8IYK8 340 aaPredicted RBP25.54■■□□□ 1.68
PRKCSH-216ENST00000592445 HYPKQ9NX55 129 aa25.54■■□□□ 1.68
PRKCSH-216ENST00000592445 COL4A1P02462 1669 aa25.53■■□□□ 1.68
PRKCSH-216ENST00000592445 HOXB7P09629 217 aa25.53■■□□□ 1.68
PRKCSH-216ENST00000592445 SCARF1Q14162 830 aa25.53■■□□□ 1.68
PRKCSH-216ENST00000592445 ANGEL2Q5VTE6 544 aaKnown RBP25.53■■□□□ 1.68
PRKCSH-216ENST00000592445 PODXL2Q9NZ53 605 aa25.53■■□□□ 1.68
PRKCSH-216ENST00000592445 GGA1Q9UJY5 639 aa25.53■■□□□ 1.68
PRKCSH-216ENST00000592445 AKAP11Q9UKA4 1901 aa25.53■■□□□ 1.68
PRKCSH-216ENST00000592445 PDE4DIPQ5VU43 2346 aa25.52■■□□□ 1.68
PRKCSH-216ENST00000592445 HSP90B1P14625 803 aaKnown RBP25.51■■□□□ 1.67
PRKCSH-216ENST00000592445 ZNF280AP59817 542 aaPredicted RBP25.51■■□□□ 1.67
PRKCSH-216ENST00000592445 TRIM28Q13263 835 aaKnown RBP25.51■■□□□ 1.67
PRKCSH-216ENST00000592445 RASAL3Q86YV0 1011 aa25.51■■□□□ 1.67
PRKCSH-216ENST00000592445 AGBL3Q8NEM8 1001 aa25.51■■□□□ 1.67
PRKCSH-216ENST00000592445 SEC31BQ9NQW1 1179 aa25.51■■□□□ 1.67
PRKCSH-216ENST00000592445 RSBN1LQ6PCB5 846 aaPredicted RBP25.5■■□□□ 1.67
PRKCSH-216ENST00000592445 RIC3Q7Z5B4 369 aa25.5■■□□□ 1.67
PRKCSH-216ENST00000592445 FKBP1BP68106 108 aa25.49■■□□□ 1.67
PRKCSH-216ENST00000592445 RALBP1Q15311 655 aa25.49■■□□□ 1.67
PRKCSH-216ENST00000592445 ZBTB38Q8NAP3 1195 aaPredicted RBP25.49■■□□□ 1.67
PRKCSH-216ENST00000592445 TRIM35Q9UPQ4 493 aa25.49■■□□□ 1.67
PRKCSH-216ENST00000592445 SCN9AQ15858 1988 aa25.49■■□□□ 1.67
PRKCSH-216ENST00000592445 USP17L8P0C7I0 530 aa25.47■■□□□ 1.67
PRKCSH-216ENST00000592445 GOLGA2Q08379 1002 aa25.47■■□□□ 1.67
PRKCSH-216ENST00000592445 CCDC152Q4G0S7 254 aa25.47■■□□□ 1.67
PRKCSH-216ENST00000592445 DUSP27Q5VZP5 1158 aa25.47■■□□□ 1.67
PRKCSH-216ENST00000592445 MYOZ2Q9NPC6 264 aa25.47■■□□□ 1.67
PRKCSH-216ENST00000592445 RUNDC1Q96C34 613 aa25.46■■□□□ 1.67
PRKCSH-216ENST00000592445 HDAC9Q9UKV0 1011 aa25.46■■□□□ 1.67
PRKCSH-216ENST00000592445 CCDC85AQ96PX6 553 aaPredicted RBP25.45■■□□□ 1.66
PRKCSH-216ENST00000592445 HPS5Q9UPZ3 1129 aa25.45■■□□□ 1.66
PRKCSH-216ENST00000592445 PITPNM2Q9BZ72 1349 aa25.44■■□□□ 1.66
PRKCSH-216ENST00000592445 MYD88Q99836 296 aa25.44■■□□□ 1.66
PRKCSH-216ENST00000592445 SCAF8Q9UPN6 1271 aaKnown RBP25.44■■□□□ 1.66
PRKCSH-216ENST00000592445 ZNF609O15014 1411 aa25.44■■□□□ 1.66
PRKCSH-216ENST00000592445 PAPPA2Q9BXP8 1791 aa25.44■■□□□ 1.66
PRKCSH-216ENST00000592445 XDHP47989 1333 aa25.43■■□□□ 1.66
PRKCSH-216ENST00000592445 USP17L3A6NCW0 530 aa25.43■■□□□ 1.66
PRKCSH-216ENST00000592445 USP17L4A6NCW7 530 aa25.43■■□□□ 1.66
PRKCSH-216ENST00000592445 UBE2Q2LH0YL09 131 aa25.43■■□□□ 1.66
PRKCSH-216ENST00000592445 PKN2Q16513 984 aaKnown RBP25.43■■□□□ 1.66
PRKCSH-216ENST00000592445 PRPF38BQ5VTL8 546 aaKnown RBP25.43■■□□□ 1.66
PRKCSH-216ENST00000592445 MOB2Q70IA6 237 aa25.43■■□□□ 1.66
PRKCSH-216ENST00000592445 USP17L1Q7RTZ2 530 aa25.43■■□□□ 1.66
PRKCSH-216ENST00000592445 GMLQ99445 158 aa25.43■■□□□ 1.66
PRKCSH-216ENST00000592445 PDE8AO60658 829 aa25.42■■□□□ 1.66
PRKCSH-216ENST00000592445 TTLL12Q14166 644 aaPredicted RBP25.42■■□□□ 1.66
PRKCSH-216ENST00000592445 WDR43Q15061 677 aaKnown RBP eCLIP25.42■■□□□ 1.661e-7■■■□□ 17.1
PRKCSH-216ENST00000592445 PODNQ7Z5L7 613 aa25.42■■□□□ 1.66
PRKCSH-216ENST00000592445 ANKRD18AQ8IVF6 992 aa25.42■■□□□ 1.66
PRKCSH-216ENST00000592445 TBC1D8O95759 1140 aa25.41■■□□□ 1.66
PRKCSH-216ENST00000592445 ATP2B4P23634 1241 aa25.41■■□□□ 1.66
PRKCSH-216ENST00000592445 CCDC191Q8NCU4 936 aa25.41■■□□□ 1.66
PRKCSH-216ENST00000592445 JARID2Q92833 1246 aaPredicted RBP25.41■■□□□ 1.66
PRKCSH-216ENST00000592445 PHAXQ9H814 394 aaKnown RBP25.41■■□□□ 1.66
PRKCSH-216ENST00000592445 MBIPQ9NS73 344 aa25.41■■□□□ 1.66
PRKCSH-216ENST00000592445 PCCAP05165 728 aaPredicted RBP25.4■■□□□ 1.66
PRKCSH-216ENST00000592445 PRAMEF18Q5VWM3 479 aa25.4■■□□□ 1.66
PRKCSH-216ENST00000592445 ZNF296Q8WUU4 475 aaPredicted RBP25.4■■□□□ 1.66
PRKCSH-216ENST00000592445 CWC25Q9NXE8 425 aaPredicted RBP25.4■■□□□ 1.66
PRKCSH-216ENST00000592445 NBPF9Q3BBW0 867 aa25.38■■□□□ 1.65
PRKCSH-216ENST00000592445 NF2P35240 595 aa25.37■■□□□ 1.65
PRKCSH-216ENST00000592445 MKRN3Q13064 507 aaKnown RBP25.37■■□□□ 1.65
PRKCSH-216ENST00000592445 OGFOD1Q8N543 542 aa25.37■■□□□ 1.65
PRKCSH-216ENST00000592445 FBXW7Q969H0 707 aa25.37■■□□□ 1.65
PRKCSH-216ENST00000592445 MYBBP1AQ9BQG0 1328 aaKnown RBP25.37■■□□□ 1.65
PRKCSH-216ENST00000592445 ELL2O00472 640 aaPredicted RBP25.36■■□□□ 1.65
PRKCSH-216ENST00000592445 CDC5LQ99459 802 aaKnown RBP25.36■■□□□ 1.65
PRKCSH-216ENST00000592445 PSME4Q14997 1843 aa25.35■■□□□ 1.65
PRKCSH-216ENST00000592445 TM4SF4P48230 202 aa25.35■■□□□ 1.65
PRKCSH-216ENST00000592445 ADAMTS8Q9UP79 889 aa25.35■■□□□ 1.65
PRKCSH-216ENST00000592445 GPR25O00155 361 aa25.34■■□□□ 1.65
PRKCSH-216ENST00000592445 DDX58O95786 925 aaKnown RBP25.34■■□□□ 1.65
PRKCSH-216ENST00000592445 MXD3Q9BW11 206 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms