RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 HIRAP54198 1017 aaPredicted RBP23.56■■□□□ 1.36
CIRBP-237ENST00000592234 NEXNQ0ZGT2 675 aa23.56■■□□□ 1.36
CIRBP-237ENST00000592234 DOK7Q18PE1 504 aa23.56■■□□□ 1.36
CIRBP-237ENST00000592234 ZC3H15Q8WU90 426 aaKnown RBP23.56■■□□□ 1.36
CIRBP-237ENST00000592234 GLIS2Q9BZE0 524 aaPredicted RBP23.56■■□□□ 1.36
CIRBP-237ENST00000592234 ZC3H12CQ9C0D7 883 aaKnown RBP23.56■■□□□ 1.36
CIRBP-237ENST00000592234 PODXL2Q9NZ53 605 aa23.56■■□□□ 1.36
CIRBP-237ENST00000592234 PGAP2Q9UHJ9 254 aa23.56■■□□□ 1.36
CIRBP-237ENST00000592234 POLR2AP24928 1970 aaKnown RBP23.56■■□□□ 1.36
CIRBP-237ENST00000592234 SCN9AQ15858 1988 aa23.56■■□□□ 1.36
CIRBP-237ENST00000592234 SPEF2Q9C093 1822 aa23.55■■□□□ 1.36
CIRBP-237ENST00000592234 CAPN15O75808 1086 aa23.55■■□□□ 1.36
CIRBP-237ENST00000592234 UFL1O94874 794 aa23.55■■□□□ 1.36
CIRBP-237ENST00000592234 CTCFP49711 727 aaPredicted RBP23.55■■□□□ 1.36
CIRBP-237ENST00000592234 DPF2Q92785 391 aa23.55■■□□□ 1.36
CIRBP-237ENST00000592234 WBP1LQ9NX94 342 aa23.55■■□□□ 1.36
CIRBP-237ENST00000592234 IL16Q14005 1332 aa23.55■■□□□ 1.36
CIRBP-237ENST00000592234 CELF2O95319 508 aaKnown RBP23.54■■□□□ 1.36
CIRBP-237ENST00000592234 IGKV5-2P06315 115 aa23.54■■□□□ 1.36
CIRBP-237ENST00000592234 ECE1P42892 770 aa23.54■■□□□ 1.36
CIRBP-237ENST00000592234 ANKRD18AQ8IVF6 992 aa23.54■■□□□ 1.36
CIRBP-237ENST00000592234 GGA1Q9UJY5 639 aa23.54■■□□□ 1.36
CIRBP-237ENST00000592234 TLL2Q9Y6L7 1015 aa23.54■■□□□ 1.36
CIRBP-237ENST00000592234 G3V3G9 751 aa23.53■■□□□ 1.36
CIRBP-237ENST00000592234 MAP2K1Q02750 393 aaPredicted RBP23.53■■□□□ 1.36
CIRBP-237ENST00000592234 GRM1Q13255 1194 aa23.53■■□□□ 1.36
CIRBP-237ENST00000592234 NCBP3Q53F19 620 aaKnown RBP23.53■■□□□ 1.36
CIRBP-237ENST00000592234 DCAF8Q5TAQ9 597 aa23.53■■□□□ 1.36
CIRBP-237ENST00000592234 CAPNS2Q96L46 248 aa23.53■■□□□ 1.36
CIRBP-237ENST00000592234 KCNQ5Q9NR82 932 aa23.53■■□□□ 1.36
CIRBP-237ENST00000592234 RTL9Q8NET4 1388 aa23.52■■□□□ 1.36
CIRBP-237ENST00000592234 SLC4A2P04920 1241 aa23.52■■□□□ 1.36
CIRBP-237ENST00000592234 RPS12P25398 132 aaKnown RBP23.52■■□□□ 1.36
CIRBP-237ENST00000592234 CYP4F22Q6NT55 531 aa23.52■■□□□ 1.36
CIRBP-237ENST00000592234 CDC37L1Q7L3B6 337 aa23.52■■□□□ 1.36
CIRBP-237ENST00000592234 G2E3Q7L622 706 aa23.52■■□□□ 1.36
CIRBP-237ENST00000592234 PRDM10Q9NQV6 1147 aa23.52■■□□□ 1.36
CIRBP-237ENST00000592234 PSME4Q14997 1843 aa23.52■■□□□ 1.36
CIRBP-237ENST00000592234 THSD7BQ9C0I4 1608 aa23.51■■□□□ 1.35
CIRBP-237ENST00000592234 CTSWP56202 376 aa23.51■■□□□ 1.35
CIRBP-237ENST00000592234 CWF19L2Q2TBE0 894 aaKnown RBP23.51■■□□□ 1.35
CIRBP-237ENST00000592234 SAMD7Q7Z3H4 446 aa23.51■■□□□ 1.35
CIRBP-237ENST00000592234 CDC5LQ99459 802 aaKnown RBP23.51■■□□□ 1.35
CIRBP-237ENST00000592234 ZNF408Q9H9D4 720 aa23.51■■□□□ 1.35
CIRBP-237ENST00000592234 NEURL1BA8MQ27 555 aa23.5■■□□□ 1.35
CIRBP-237ENST00000592234 TBC1D10BQ4KMP7 808 aaPredicted RBP23.5■■□□□ 1.35
CIRBP-237ENST00000592234 SALL2Q9Y467 1007 aaPredicted RBP23.5■■□□□ 1.35
CIRBP-237ENST00000592234 XDHP47989 1333 aa23.5■■□□□ 1.35
CIRBP-237ENST00000592234 FANCIQ9NVI1 1328 aa23.49■■□□□ 1.35
CIRBP-237ENST00000592234 LBX1P52954 281 aa23.48■■□□□ 1.35
CIRBP-237ENST00000592234 FLIIQ13045 1269 aa23.48■■□□□ 1.35
CIRBP-237ENST00000592234 RBM26Q5T8P6 1007 aaKnown RBP23.48■■□□□ 1.35
CIRBP-237ENST00000592234 SAPCD2Q86UD0 394 aa23.48■■□□□ 1.35
CIRBP-237ENST00000592234 TTLL11Q8NHH1 800 aa23.48■■□□□ 1.35
CIRBP-237ENST00000592234 EGFRP00533 1210 aa23.47■■□□□ 1.35
CIRBP-237ENST00000592234 VIL1P09327 827 aaKnown RBP23.47■■□□□ 1.35
CIRBP-237ENST00000592234 ATP2B4P23634 1241 aa23.47■■□□□ 1.35
CIRBP-237ENST00000592234 USP48Q86UV5 1035 aa23.47■■□□□ 1.35
CIRBP-237ENST00000592234 WDR63Q8IWG1 891 aa23.47■■□□□ 1.35
CIRBP-237ENST00000592234 GREM2Q9H772 168 aa23.47■■□□□ 1.35
CIRBP-237ENST00000592234 FKBP5Q13451 457 aaPredicted RBP23.46■■□□□ 1.35
CIRBP-237ENST00000592234 UBE3BQ7Z3V4 1068 aa23.46■■□□□ 1.35
CIRBP-237ENST00000592234 BEGAINQ9BUH8 593 aa23.46■■□□□ 1.35
CIRBP-237ENST00000592234 H7C1W4 665 aa23.45■■□□□ 1.34
CIRBP-237ENST00000592234 HSPA8P11142 646 aaKnown RBP23.45■■□□□ 1.34
CIRBP-237ENST00000592234 KIF4BQ2VIQ3 1234 aa23.45■■□□□ 1.34
CIRBP-237ENST00000592234 DCPSQ96C86 337 aaKnown RBP23.45■■□□□ 1.34
CIRBP-237ENST00000592234 HHIPL1Q96JK4 782 aa23.45■■□□□ 1.34
CIRBP-237ENST00000592234 BSDC1Q9NW68 430 aaPredicted RBP23.45■■□□□ 1.34
CIRBP-237ENST00000592234 GCKRQ14397 625 aa23.44■■□□□ 1.34
CIRBP-237ENST00000592234 KRT26Q7Z3Y9 468 aa23.44■■□□□ 1.34
CIRBP-237ENST00000592234 DNAAF4Q8WXU2 420 aa23.44■■□□□ 1.34
CIRBP-237ENST00000592234 AOC2O75106 756 aa23.43■■□□□ 1.34
CIRBP-237ENST00000592234 VAMP4O75379 141 aa23.43■■□□□ 1.34
CIRBP-237ENST00000592234 MAP2K2P36507 400 aa23.43■■□□□ 1.34
CIRBP-237ENST00000592234 AGBL3Q8NEM8 1001 aa23.43■■□□□ 1.34
CIRBP-237ENST00000592234 MYH16Q9H6N6 1097 aa23.43■■□□□ 1.34
CIRBP-237ENST00000592234 MINPP1Q9UNW1 487 aa23.43■■□□□ 1.34
CIRBP-237ENST00000592234 EXOSC9Q06265 439 aaKnown RBP23.42■■□□□ 1.34
CIRBP-237ENST00000592234 RSBN1LQ6PCB5 846 aaPredicted RBP23.42■■□□□ 1.34
CIRBP-237ENST00000592234 DLK2Q6UY11 383 aa23.42■■□□□ 1.34
CIRBP-237ENST00000592234 PODNQ7Z5L7 613 aa23.42■■□□□ 1.34
CIRBP-237ENST00000592234 FAM9BQ8IZU0 186 aa23.42■■□□□ 1.34
CIRBP-237ENST00000592234 IGHMBP2P38935 993 aaKnown RBP23.41■■□□□ 1.34
CIRBP-237ENST00000592234 PLA2G12BQ9BX93 195 aa23.41■■□□□ 1.34
CIRBP-237ENST00000592234 ZNF609O15014 1411 aa23.41■■□□□ 1.34
CIRBP-237ENST00000592234 MED23Q9ULK4 1368 aa23.4■■□□□ 1.34
CIRBP-237ENST00000592234 ADM5C9JUS6 153 aa23.4■■□□□ 1.34
CIRBP-237ENST00000592234 CCT4P50991 539 aaKnown RBP23.4■■□□□ 1.34
CIRBP-237ENST00000592234 LINS1Q8NG48 757 aa23.4■■□□□ 1.34
CIRBP-237ENST00000592234 USP17L3A6NCW0 530 aa23.39■■□□□ 1.33
CIRBP-237ENST00000592234 USP17L4A6NCW7 530 aa23.39■■□□□ 1.33
CIRBP-237ENST00000592234 WTIPA6NIX2 430 aaPredicted RBP23.39■■□□□ 1.33
CIRBP-237ENST00000592234 ITGA6P23229 1130 aa23.39■■□□□ 1.33
CIRBP-237ENST00000592234 HUNKP57058 714 aa23.39■■□□□ 1.33
CIRBP-237ENST00000592234 USP17L1Q7RTZ2 530 aa23.39■■□□□ 1.33
CIRBP-237ENST00000592234 GGA3Q9NZ52 723 aa23.39■■□□□ 1.33
CIRBP-237ENST00000592234 CASP7P55210 303 aa23.38■■□□□ 1.33
CIRBP-237ENST00000592234 ZNF280AP59817 542 aaPredicted RBP23.38■■□□□ 1.33
CIRBP-237ENST00000592234 FAM161AQ3B820 660 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms