RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 PCDH10Q9P2E7 1040 aa13.05□□□□□ -0.32
VMP1-214ENST00000592106 TRPM7Q96QT4 1865 aa13.05□□□□□ -0.32
VMP1-214ENST00000592106 G3V3G9 751 aa13.04□□□□□ -0.32
VMP1-214ENST00000592106 FOXN1O15353 648 aa13.04□□□□□ -0.32
VMP1-214ENST00000592106 PDE8AO60658 829 aa13.04□□□□□ -0.32
VMP1-214ENST00000592106 PCCAP05165 728 aaPredicted RBP13.04□□□□□ -0.32
VMP1-214ENST00000592106 RPS8P62241 208 aaKnown RBP13.04□□□□□ -0.32
VMP1-214ENST00000592106 NEXNQ0ZGT2 675 aa13.04□□□□□ -0.32
VMP1-214ENST00000592106 DCAF8Q5TAQ9 597 aa13.04□□□□□ -0.32
VMP1-214ENST00000592106 ZC3H15Q8WU90 426 aaKnown RBP13.04□□□□□ -0.32
VMP1-214ENST00000592106 PHAXQ9H814 394 aaKnown RBP13.04□□□□□ -0.32
VMP1-214ENST00000592106 PRDM10Q9NQV6 1147 aa13.04□□□□□ -0.32
VMP1-214ENST00000592106 WDR33Q9C0J8 1336 aaKnown RBP13.04□□□□□ -0.32
VMP1-214ENST00000592106 RPS12P25398 132 aaKnown RBP13.03□□□□□ -0.32
VMP1-214ENST00000592106 ZEB1P37275 1124 aaPredicted RBP13.03□□□□□ -0.32
VMP1-214ENST00000592106 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
VMP1-214ENST00000592106 BEGAINQ9BUH8 593 aa13.03□□□□□ -0.32
VMP1-214ENST00000592106 METTL22Q9BUU2 404 aaPredicted RBP13.03□□□□□ -0.32
VMP1-214ENST00000592106 TAF1P21675 1872 aa13.03□□□□□ -0.32
VMP1-214ENST00000592106 ECE2O60344 883 aa13.02□□□□□ -0.33
VMP1-214ENST00000592106 GPSM2P81274 684 aa13.02□□□□□ -0.33
VMP1-214ENST00000592106 ANKRD18AQ8IVF6 992 aa13.02□□□□□ -0.33
VMP1-214ENST00000592106 MICALL2Q8IY33 904 aa13.02□□□□□ -0.33
VMP1-214ENST00000592106 C8orf58Q8NAV2 365 aa13.02□□□□□ -0.33
VMP1-214ENST00000592106 DPF2Q92785 391 aa13.02□□□□□ -0.33
VMP1-214ENST00000592106 ZC3H12CQ9C0D7 883 aaKnown RBP13.02□□□□□ -0.33
VMP1-214ENST00000592106 DBNDD1Q9H9R9 158 aa13.02□□□□□ -0.33
VMP1-214ENST00000592106 ANKIB1Q9P2G1 1089 aa13.02□□□□□ -0.33
VMP1-214ENST00000592106 CNOT7Q9UIV1 285 aaKnown RBP13.02□□□□□ -0.33
VMP1-214ENST00000592106 GGA1Q9UJY5 639 aa13.02□□□□□ -0.33
VMP1-214ENST00000592106 TLL2Q9Y6L7 1015 aa13.02□□□□□ -0.33
VMP1-214ENST00000592106 THSD7BQ9C0I4 1608 aa13.02□□□□□ -0.33
VMP1-214ENST00000592106 YDJCA8MPS7 323 aa13.01□□□□□ -0.33
VMP1-214ENST00000592106 TRAF5O00463 557 aa13.01□□□□□ -0.33
VMP1-214ENST00000592106 RIMBP2O15034 1052 aa13.01□□□□□ -0.33
VMP1-214ENST00000592106 UFL1O94874 794 aa13.01□□□□□ -0.33
VMP1-214ENST00000592106 CELF2O95319 508 aaKnown RBP13.01□□□□□ -0.33
VMP1-214ENST00000592106 CDC37L1Q7L3B6 337 aa13.01□□□□□ -0.33
VMP1-214ENST00000592106 TBC1D16Q8TBP0 767 aa13.01□□□□□ -0.33
VMP1-214ENST00000592106 CAPNS2Q96L46 248 aa13.01□□□□□ -0.33
VMP1-214ENST00000592106 CDC5LQ99459 802 aaKnown RBP13.01□□□□□ -0.33
VMP1-214ENST00000592106 WBP1LQ9NX94 342 aa13.01□□□□□ -0.33
VMP1-214ENST00000592106 PODXL2Q9NZ53 605 aa13.01□□□□□ -0.33
VMP1-214ENST00000592106 MAP3K2Q9Y2U5 619 aa13.01□□□□□ -0.33
VMP1-214ENST00000592106 IL16Q14005 1332 aa13□□□□□ -0.33
VMP1-214ENST00000592106 PSMD14O00487 310 aa13□□□□□ -0.33
VMP1-214ENST00000592106 ANP32CO43423 234 aa13□□□□□ -0.33
VMP1-214ENST00000592106 GRM1Q13255 1194 aa13□□□□□ -0.33
VMP1-214ENST00000592106 TWISTNBQ3B726 338 aaPredicted RBP13□□□□□ -0.33
VMP1-214ENST00000592106 KSR2Q6VAB6 950 aa13□□□□□ -0.33
VMP1-214ENST00000592106 TRPM4Q8TD43 1214 aa13□□□□□ -0.33
VMP1-214ENST00000592106 GLIS2Q9BZE0 524 aaPredicted RBP13□□□□□ -0.33
VMP1-214ENST00000592106 POLLQ9UGP5 575 aa13□□□□□ -0.33
VMP1-214ENST00000592106 PGAP2Q9UHJ9 254 aa13□□□□□ -0.33
VMP1-214ENST00000592106 XDHP47989 1333 aa12.99□□□□□ -0.33
VMP1-214ENST00000592106 CTSWP56202 376 aa12.99□□□□□ -0.33
VMP1-214ENST00000592106 DOK7Q18PE1 504 aa12.99□□□□□ -0.33
VMP1-214ENST00000592106 TSR2Q969E8 191 aaKnown RBP12.99□□□□□ -0.33
VMP1-214ENST00000592106 HHIPL1Q96JK4 782 aa12.99□□□□□ -0.33
VMP1-214ENST00000592106 ZNF408Q9H9D4 720 aa12.99□□□□□ -0.33
VMP1-214ENST00000592106 MRS2Q9HD23 443 aa12.99□□□□□ -0.33
VMP1-214ENST00000592106 SEC31BQ9NQW1 1179 aa12.99□□□□□ -0.33
VMP1-214ENST00000592106 PI4KAP2A4QPH2 592 aa12.98□□□□□ -0.33
VMP1-214ENST00000592106 ATP2B4P23634 1241 aa12.98□□□□□ -0.33
VMP1-214ENST00000592106 FMR1Q06787 632 aaKnown RBP eCLIP12.98□□□□□ -0.33
VMP1-214ENST00000592106 CST9Q5W186 159 aa12.98□□□□□ -0.33
VMP1-214ENST00000592106 CYP4F22Q6NT55 531 aa12.98□□□□□ -0.33
VMP1-214ENST00000592106 WWC1Q8IX03 1113 aa12.98□□□□□ -0.33
VMP1-214ENST00000592106 TSPYL6Q8N831 410 aa12.98□□□□□ -0.33
VMP1-214ENST00000592106 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
VMP1-214ENST00000592106 DCPSQ96C86 337 aaKnown RBP12.98□□□□□ -0.33
VMP1-214ENST00000592106 GPR101Q96P66 508 aaPredicted RBP12.98□□□□□ -0.33
VMP1-214ENST00000592106 MAP2K2P36507 400 aa12.97□□□□□ -0.33
VMP1-214ENST00000592106 LBX1P52954 281 aa12.97□□□□□ -0.33
VMP1-214ENST00000592106 HIRAP54198 1017 aaPredicted RBP12.97□□□□□ -0.33
VMP1-214ENST00000592106 TBC1D10BQ4KMP7 808 aaPredicted RBP12.97□□□□□ -0.33
VMP1-214ENST00000592106 POTEHQ6S545 545 aa12.97□□□□□ -0.33
VMP1-214ENST00000592106 SAPCD2Q86UD0 394 aa12.97□□□□□ -0.33
VMP1-214ENST00000592106 CCDC85AQ96PX6 553 aaPredicted RBP12.97□□□□□ -0.33
VMP1-214ENST00000592106 MYH16Q9H6N6 1097 aa12.97□□□□□ -0.33
VMP1-214ENST00000592106 FARP1Q9Y4F1 1045 aaPredicted RBP12.97□□□□□ -0.33
VMP1-214ENST00000592106 MYH3P11055 1940 aa12.97□□□□□ -0.33
VMP1-214ENST00000592106 ZNF609O15014 1411 aa12.96□□□□□ -0.33
VMP1-214ENST00000592106 RTL9Q8NET4 1388 aa12.96□□□□□ -0.33
VMP1-214ENST00000592106 COL4A1P02462 1669 aa12.96□□□□□ -0.33
VMP1-214ENST00000592106 CA12O43570 354 aa12.96□□□□□ -0.33
VMP1-214ENST00000592106 VIL1P09327 827 aaKnown RBP12.96□□□□□ -0.33
VMP1-214ENST00000592106 HSPA8P11142 646 aaKnown RBP12.96□□□□□ -0.33
VMP1-214ENST00000592106 KIF4BQ2VIQ3 1234 aa12.96□□□□□ -0.33
VMP1-214ENST00000592106 SAMD7Q7Z3H4 446 aa12.96□□□□□ -0.33
VMP1-214ENST00000592106 KRT26Q7Z3Y9 468 aa12.96□□□□□ -0.33
VMP1-214ENST00000592106 AGBL3Q8NEM8 1001 aa12.96□□□□□ -0.33
VMP1-214ENST00000592106 SHTN1A0MZ66 631 aa12.95□□□□□ -0.34
VMP1-214ENST00000592106 NEURL1BA8MQ27 555 aa12.95□□□□□ -0.34
VMP1-214ENST00000592106 IGKV5-2P06315 115 aa12.95□□□□□ -0.34
VMP1-214ENST00000592106 IGHMBP2P38935 993 aaKnown RBP12.95□□□□□ -0.34
VMP1-214ENST00000592106 FLIIQ13045 1269 aa12.95□□□□□ -0.34
VMP1-214ENST00000592106 USP48Q86UV5 1035 aa12.95□□□□□ -0.34
VMP1-214ENST00000592106 SULF1Q8IWU6 871 aa12.95□□□□□ -0.34
VMP1-214ENST00000592106 JARID2Q92833 1246 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms