RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 TM4SF4P48230 202 aa13.36□□□□□ -0.27
SDF2-209ENST00000591903 INTS3Q68E01 1043 aaKnown RBP13.36□□□□□ -0.27
SDF2-209ENST00000591903 CFHR5Q9BXR6 569 aa13.36□□□□□ -0.27
SDF2-209ENST00000591903 NSFL1CQ9UNZ2 370 aaKnown RBP13.36□□□□□ -0.27
SDF2-209ENST00000591903 RTL9Q8NET4 1388 aa13.35□□□□□ -0.27
SDF2-209ENST00000591903 C6orf229H3BNL8 230 aa13.35□□□□□ -0.27
SDF2-209ENST00000591903 VIL1P09327 827 aaKnown RBP13.35□□□□□ -0.27
SDF2-209ENST00000591903 SREBF2Q12772 1141 aa13.35□□□□□ -0.27
SDF2-209ENST00000591903 NLRP10Q86W26 655 aa13.35□□□□□ -0.27
SDF2-209ENST00000591903 TRMT112Q9UI30 125 aaKnown RBP13.35□□□□□ -0.27
SDF2-209ENST00000591903 RIMBP2O15034 1052 aa13.34□□□□□ -0.27
SDF2-209ENST00000591903 FKTNO75072 461 aa13.34□□□□□ -0.27
SDF2-209ENST00000591903 CNGB1Q14028 1251 aaPredicted RBP13.34□□□□□ -0.27
SDF2-209ENST00000591903 ANGEL2Q5VTE6 544 aaKnown RBP13.34□□□□□ -0.27
SDF2-209ENST00000591903 LRP10Q7Z4F1 713 aa13.34□□□□□ -0.27
SDF2-209ENST00000591903 AGBL3Q8NEM8 1001 aa13.34□□□□□ -0.27
SDF2-209ENST00000591903 POLLQ9UGP5 575 aa13.34□□□□□ -0.27
SDF2-209ENST00000591903 ZNF280AP59817 542 aaPredicted RBP13.33□□□□□ -0.28
SDF2-209ENST00000591903 SCARF1Q14162 830 aa13.33□□□□□ -0.28
SDF2-209ENST00000591903 LAMB1P07942 1786 aa13.32□□□□□ -0.28
SDF2-209ENST00000591903 G3V3G9 751 aa13.32□□□□□ -0.28
SDF2-209ENST00000591903 ALDH1A1P00352 501 aa13.32□□□□□ -0.28
SDF2-209ENST00000591903 FXR1P51114 621 aaKnown RBP eCLIP13.32□□□□□ -0.28
SDF2-209ENST00000591903 TCIRG1Q13488 830 aa13.32□□□□□ -0.28
SDF2-209ENST00000591903 PDIA6Q15084 440 aa13.32□□□□□ -0.28
SDF2-209ENST00000591903 DOK7Q18PE1 504 aa13.32□□□□□ -0.28
SDF2-209ENST00000591903 DCAF8Q5TAQ9 597 aa13.32□□□□□ -0.28
SDF2-209ENST00000591903 ZC3H12CQ9C0D7 883 aaKnown RBP13.32□□□□□ -0.28
SDF2-209ENST00000591903 PNNQ9H307 717 aaKnown RBP13.32□□□□□ -0.28
SDF2-209ENST00000591903 KCNQ5Q9NR82 932 aa13.32□□□□□ -0.28
SDF2-209ENST00000591903 ASTN2O75129 1339 aaPredicted RBP13.32□□□□□ -0.28
SDF2-209ENST00000591903 NF2P35240 595 aa13.31□□□□□ -0.28
SDF2-209ENST00000591903 GPSM2P81274 684 aa13.31□□□□□ -0.28
SDF2-209ENST00000591903 SF3B3Q15393 1217 aaKnown RBP13.31□□□□□ -0.28
SDF2-209ENST00000591903 RSBN1LQ6PCB5 846 aaPredicted RBP13.31□□□□□ -0.28
SDF2-209ENST00000591903 TBC1D16Q8TBP0 767 aa13.31□□□□□ -0.28
SDF2-209ENST00000591903 THUMPD2Q9BTF0 503 aaKnown RBP13.31□□□□□ -0.28
SDF2-209ENST00000591903 KIAA0100Q14667 2235 aaKnown RBP13.31□□□□□ -0.28
SDF2-209ENST00000591903 CENPFP49454 3210 aa13.3□□□□□ -0.28
SDF2-209ENST00000591903 HTTP42858 3142 aa13.3□□□□□ -0.28
SDF2-209ENST00000591903 EIF2S2P20042 333 aaKnown RBP13.3□□□□□ -0.28
SDF2-209ENST00000591903 CELF1Q92879 486 aaKnown RBP13.3□□□□□ -0.28
SDF2-209ENST00000591903 MYOZ2Q9NPC6 264 aa13.3□□□□□ -0.28
SDF2-209ENST00000591903 PODXL2Q9NZ53 605 aa13.3□□□□□ -0.28
SDF2-209ENST00000591903 UBE2Q2LH0YL09 131 aa13.29□□□□□ -0.28
SDF2-209ENST00000591903 USP17L8P0C7I0 530 aa13.29□□□□□ -0.28
SDF2-209ENST00000591903 TTLL12Q14166 644 aaPredicted RBP13.29□□□□□ -0.28
SDF2-209ENST00000591903 COPS6Q7L5N1 327 aa13.29□□□□□ -0.28
SDF2-209ENST00000591903 TSPYL4Q9UJ04 414 aa13.29□□□□□ -0.28
SDF2-209ENST00000591903 POTEFA5A3E0 1075 aa13.28□□□□□ -0.28
SDF2-209ENST00000591903 INHBEP58166 350 aa13.28□□□□□ -0.28
SDF2-209ENST00000591903 AIMP1Q12904 312 aaKnown RBP13.28□□□□□ -0.28
SDF2-209ENST00000591903 NFE2L2Q16236 605 aa13.28□□□□□ -0.28
SDF2-209ENST00000591903 PROSER3Q2NL68 480 aa13.28□□□□□ -0.28
SDF2-209ENST00000591903 MOB2Q70IA6 237 aa13.28□□□□□ -0.28
SDF2-209ENST00000591903 XAGE3Q8WTP9 111 aa13.28□□□□□ -0.28
SDF2-209ENST00000591903 BABAM1Q9NWV8 329 aa13.28□□□□□ -0.28
SDF2-209ENST00000591903 TRIM17Q9Y577 477 aa13.28□□□□□ -0.28
SDF2-209ENST00000591903 RPS8P62241 208 aaKnown RBP13.27□□□□□ -0.29
SDF2-209ENST00000591903 ARMC9Q7Z3E5 817 aa13.27□□□□□ -0.29
SDF2-209ENST00000591903 GMLQ99445 158 aa13.27□□□□□ -0.29
SDF2-209ENST00000591903 MRS2Q9HD23 443 aa13.27□□□□□ -0.29
SDF2-209ENST00000591903 GGA1Q9UJY5 639 aa13.27□□□□□ -0.29
SDF2-209ENST00000591903 BRCA2P51587 3418 aa13.26□□□□□ -0.29
SDF2-209ENST00000591903 UFL1O94874 794 aa13.26□□□□□ -0.29
SDF2-209ENST00000591903 COL4A1P02462 1669 aa13.26□□□□□ -0.29
SDF2-209ENST00000591903 ANXA1P04083 346 aa13.26□□□□□ -0.29
SDF2-209ENST00000591903 HSP90B1P14625 803 aaKnown RBP13.26□□□□□ -0.29
SDF2-209ENST00000591903 MMP14P50281 582 aa13.26□□□□□ -0.29
SDF2-209ENST00000591903 WDR43Q15061 677 aaKnown RBP eCLIP13.26□□□□□ -0.29
SDF2-209ENST00000591903 NCBP3Q53F19 620 aaKnown RBP13.26□□□□□ -0.29
SDF2-209ENST00000591903 OTOP1Q7RTM1 612 aa13.26□□□□□ -0.29
SDF2-209ENST00000591903 ANKIB1Q9P2G1 1089 aa13.26□□□□□ -0.29
SDF2-209ENST00000591903 MAPK8IP3Q9UPT6 1336 aa13.25□□□□□ -0.29
SDF2-209ENST00000591903 USP17L3A6NCW0 530 aa13.25□□□□□ -0.29
SDF2-209ENST00000591903 USP17L4A6NCW7 530 aa13.25□□□□□ -0.29
SDF2-209ENST00000591903 MKRN3Q13064 507 aaKnown RBP13.25□□□□□ -0.29
SDF2-209ENST00000591903 USP17L1Q7RTZ2 530 aa13.25□□□□□ -0.29
SDF2-209ENST00000591903 PODNQ7Z5L7 613 aa13.25□□□□□ -0.29
SDF2-209ENST00000591903 PLBD2Q8NHP8 589 aa13.25□□□□□ -0.29
SDF2-209ENST00000591903 FAM89AQ96GI7 184 aa13.25□□□□□ -0.29
SDF2-209ENST00000591903 ERO1AQ96HE7 468 aa13.25□□□□□ -0.29
SDF2-209ENST00000591903 PLEKHF1Q96S99 279 aa13.25□□□□□ -0.29
SDF2-209ENST00000591903 MANSC4A6NHS7 340 aaPredicted RBP13.24□□□□□ -0.29
SDF2-209ENST00000591903 SPRYD7Q5W111 196 aa13.24□□□□□ -0.29
SDF2-209ENST00000591903 MIER1Q8N108 512 aa13.24□□□□□ -0.29
SDF2-209ENST00000591903 OGFOD1Q8N543 542 aa13.24□□□□□ -0.29
SDF2-209ENST00000591903 ARMC5Q96C12 935 aa13.24□□□□□ -0.29
SDF2-209ENST00000591903 ISCA1Q9BUE6 129 aa13.24□□□□□ -0.29
SDF2-209ENST00000591903 R3HDMLQ9H3Y0 253 aa13.24□□□□□ -0.29
SDF2-209ENST00000591903 PTPN22Q9Y2R2 807 aa13.24□□□□□ -0.29
SDF2-209ENST00000591903 ZNF646O15015 1829 aaPredicted RBP13.24□□□□□ -0.29
SDF2-209ENST00000591903 MYO3BQ8WXR4 1341 aa13.23□□□□□ -0.29
SDF2-209ENST00000591903 PTPN12Q05209 780 aaKnown RBP13.23□□□□□ -0.29
SDF2-209ENST00000591903 PRAMEF18Q5VWM3 479 aa13.23□□□□□ -0.29
SDF2-209ENST00000591903 IFNL1Q8IU54 200 aa13.23□□□□□ -0.29
SDF2-209ENST00000591903 TMEM106CQ9BVX2 250 aa13.23□□□□□ -0.29
SDF2-209ENST00000591903 COLQQ9Y215 455 aaPredicted RBP13.23□□□□□ -0.29
SDF2-209ENST00000591903 COL1A1P02452 1464 aaPredicted RBP13.23□□□□□ -0.29
SDF2-209ENST00000591903 ECM29Q5VYK3 1845 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms