RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 INSM2Q96T92 566 aaPredicted RBP10.74□□□□□ -0.69
VMP1-213ENST00000591877 ARHGEF10O15013 1369 aa10.74□□□□□ -0.69
VMP1-213ENST00000591877 MSTNO14793 375 aa10.73□□□□□ -0.69
VMP1-213ENST00000591877 CELA2BP08218 269 aaPredicted RBP10.73□□□□□ -0.69
VMP1-213ENST00000591877 NEUROD1Q13562 356 aa10.73□□□□□ -0.69
VMP1-213ENST00000591877 PLA2G4EQ3MJ16 856 aa10.73□□□□□ -0.69
VMP1-213ENST00000591877 ERFEQ4G0M1 354 aa10.73□□□□□ -0.69
VMP1-213ENST00000591877 GPRASP1Q5JY77 1395 aa10.73□□□□□ -0.69
VMP1-213ENST00000591877 NRAPQ86VF7 1730 aa10.72□□□□□ -0.69
VMP1-213ENST00000591877 BRWD3Q6RI45 1802 aa10.72□□□□□ -0.69
VMP1-213ENST00000591877 PDXDC2PQ6P474 469 aa10.72□□□□□ -0.69
VMP1-213ENST00000591877 UNC5CLQ8IV45 518 aa10.72□□□□□ -0.69
VMP1-213ENST00000591877 NGDNQ8NEJ9 315 aaKnown RBP10.72□□□□□ -0.69
VMP1-213ENST00000591877 POLMQ9NP87 494 aaPredicted RBP10.72□□□□□ -0.69
VMP1-213ENST00000591877 SENP3-EIF4A1A0A087X0R7 540 aa10.71□□□□□ -0.69
VMP1-213ENST00000591877 USP17L3A6NCW0 530 aa10.71□□□□□ -0.69
VMP1-213ENST00000591877 USP17L4A6NCW7 530 aa10.71□□□□□ -0.69
VMP1-213ENST00000591877 FAM83GA6ND36 823 aa10.71□□□□□ -0.69
VMP1-213ENST00000591877 POLR3AO14802 1390 aaPredicted RBP10.71□□□□□ -0.69
VMP1-213ENST00000591877 LZTS3O60299 673 aaPredicted RBP10.71□□□□□ -0.69
VMP1-213ENST00000591877 USP17L2Q6R6M4 530 aa10.71□□□□□ -0.69
VMP1-213ENST00000591877 USP17L1Q7RTZ2 530 aa10.71□□□□□ -0.69
VMP1-213ENST00000591877 RALGAPBQ86X10 1494 aa10.71□□□□□ -0.69
VMP1-213ENST00000591877 CENPJQ9HC77 1338 aaPredicted RBP10.71□□□□□ -0.69
VMP1-213ENST00000591877 PHRF1Q9P1Y6 1649 aaKnown RBP10.71□□□□□ -0.69
VMP1-213ENST00000591877 GNEQ9Y223 722 aaKnown RBP10.71□□□□□ -0.69
VMP1-213ENST00000591877 COL14A1Q05707 1796 aaKnown RBP10.7□□□□□ -0.7
VMP1-213ENST00000591877 ACEP12821 1306 aa10.7□□□□□ -0.7
VMP1-213ENST00000591877 CNTNAP5Q8WYK1 1306 aa10.7□□□□□ -0.7
VMP1-213ENST00000591877 USP17L5A8MUK1 530 aa10.7□□□□□ -0.7
VMP1-213ENST00000591877 PTK2Q05397 1052 aa10.7□□□□□ -0.7
VMP1-213ENST00000591877 SRSF11Q05519 484 aaKnown RBP10.7□□□□□ -0.7
VMP1-213ENST00000591877 NBPF8Q3BBV2 869 aa10.7□□□□□ -0.7
VMP1-213ENST00000591877 SPOCK3Q9BQ16 436 aa10.7□□□□□ -0.7
VMP1-213ENST00000591877 ZNF395Q9H8N7 513 aaPredicted RBP10.7□□□□□ -0.7
VMP1-213ENST00000591877 FAM196BA6NMK8 535 aa10.69□□□□□ -0.7
VMP1-213ENST00000591877 GAS6Q14393 721 aa10.69□□□□□ -0.7
VMP1-213ENST00000591877 CDCA8Q53HL2 280 aa10.69□□□□□ -0.7
VMP1-213ENST00000591877 RNF217Q8TC41 542 aa10.69□□□□□ -0.7
VMP1-213ENST00000591877 DCAF5Q96JK2 942 aa10.69□□□□□ -0.7
VMP1-213ENST00000591877 KCTD15Q96SI1 283 aaPredicted RBP10.69□□□□□ -0.7
VMP1-213ENST00000591877 PIK3CDO00329 1044 aa10.68□□□□□ -0.7
VMP1-213ENST00000591877 ITGB2P05107 769 aa10.68□□□□□ -0.7
VMP1-213ENST00000591877 SKIP12755 728 aa10.68□□□□□ -0.7
VMP1-213ENST00000591877 VPS72Q15906 364 aa10.68□□□□□ -0.7
VMP1-213ENST00000591877 PPIP5K1Q6PFW1 1433 aa10.67□□□□□ -0.7
VMP1-213ENST00000591877 ATAD2Q6PL18 1390 aa10.67□□□□□ -0.7
VMP1-213ENST00000591877 SND1Q7KZF4 910 aaKnown RBP eCLIP10.67□□□□□ -0.71e-7■■■□□ 18.2
VMP1-213ENST00000591877 ENAMQ9NRM1 1142 aa10.67□□□□□ -0.7
VMP1-213ENST00000591877 CUEDC1Q9NWM3 386 aaPredicted RBP10.67□□□□□ -0.7
VMP1-213ENST00000591877 ZMIZ1Q9ULJ6 1067 aa10.67□□□□□ -0.7
VMP1-213ENST00000591877 MTMR7Q9Y216 660 aa10.67□□□□□ -0.7
VMP1-213ENST00000591877 IVNS1ABPQ9Y6Y0 642 aa10.67□□□□□ -0.7
VMP1-213ENST00000591877 EP400Q96L91 3159 aa10.67□□□□□ -0.7
VMP1-213ENST00000591877 ROCK2O75116 1388 aaKnown RBP10.66□□□□□ -0.7
VMP1-213ENST00000591877 NUTM2GQ5VZR2 741 aa10.66□□□□□ -0.7
VMP1-213ENST00000591877 BTG4Q9NY30 223 aa10.66□□□□□ -0.7
VMP1-213ENST00000591877 CEP126Q9P2H0 1117 aa10.66□□□□□ -0.7
VMP1-213ENST00000591877 NOVA2Q9UNW9 492 aaKnown RBP10.66□□□□□ -0.7
VMP1-213ENST00000591877 NRKQ7Z2Y5 1582 aa10.65□□□□□ -0.7
VMP1-213ENST00000591877 CARNS1A5YM72 827 aa10.65□□□□□ -0.7
VMP1-213ENST00000591877 ATP5J2-PTCD1G3V325 749 aa10.65□□□□□ -0.7
VMP1-213ENST00000591877 SLFNL1Q499Z3 407 aa10.65□□□□□ -0.7
VMP1-213ENST00000591877 AKAP12Q02952 1782 aa10.65□□□□□ -0.71
VMP1-213ENST00000591877 PHF20L1A8MW92 1017 aa10.64□□□□□ -0.71
VMP1-213ENST00000591877 MAP7D1Q3KQU3 841 aa10.64□□□□□ -0.71
VMP1-213ENST00000591877 TMEM164Q5U3C3 297 aa10.64□□□□□ -0.71
VMP1-213ENST00000591877 SEPT12Q8IYM1 358 aa10.64□□□□□ -0.71
VMP1-213ENST00000591877 SLC10A4Q96EP9 437 aa10.64□□□□□ -0.71
VMP1-213ENST00000591877 ARHGAP9Q9BRR9 750 aa10.64□□□□□ -0.71
VMP1-213ENST00000591877 CABP1Q9NZU7 370 aa10.64□□□□□ -0.71
VMP1-213ENST00000591877 KIAA0232Q92628 1395 aa10.64□□□□□ -0.71
VMP1-213ENST00000591877 LMO7Q8WWI1 1683 aa10.63□□□□□ -0.71
VMP1-213ENST00000591877 DHX9Q08211 1270 aaKnown RBP10.63□□□□□ -0.71
VMP1-213ENST00000591877 CHRNA2Q15822 529 aa10.63□□□□□ -0.71
VMP1-213ENST00000591877 PHTF2Q8N3S3 785 aa10.63□□□□□ -0.71
VMP1-213ENST00000591877 USP6P35125 1406 aa10.63□□□□□ -0.71
VMP1-213ENST00000591877 SSH2Q76I76 1423 aa10.63□□□□□ -0.71
VMP1-213ENST00000591877 PIK3C2AO00443 1686 aa10.63□□□□□ -0.71
VMP1-213ENST00000591877 USP19O94966 1318 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 EVC2Q86UK5 1308 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 USP17L15C9J2P7 530 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 USP17L10C9JJH3 530 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 USP17L13C9JLJ4 530 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 USP17L12C9JPN9 530 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 USP17L11C9JVI0 530 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 USP17L21D6R901 530 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 USP17L18D6R9N7 530 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 USP17L22D6RA61 530 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 USP17L17D6RBQ6 530 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 USP17L19D6RCP7 530 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 USP17L20D6RJB6 530 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 PROCP04070 461 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 ZC3H6P61129 1189 aaKnown RBP10.62□□□□□ -0.71
VMP1-213ENST00000591877 USP17L24Q0WX57 530 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 CCDC27Q2M243 656 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 INTS6LQ5JSJ4 861 aaKnown RBP10.62□□□□□ -0.71
VMP1-213ENST00000591877 FOXD4L5Q5VV16 416 aaPredicted RBP10.62□□□□□ -0.71
VMP1-213ENST00000591877 ABTB2Q8N961 1025 aa10.62□□□□□ -0.71
VMP1-213ENST00000591877 GALNT6Q8NCL4 622 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms