RNA–Protein interactions for RNA: ENST00000591436.5

TMC6-218, Transcript of transmembrane channel like 6, humanhuman

TSL 1 (best) BASIC

Gene TMC6, Length 1,155 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-218ENST00000591436 CDC5LQ99459 802 aaKnown RBP28.98■■■□□ 2.23
TMC6-218ENST00000591436 ZC3H12CQ9C0D7 883 aaKnown RBP28.98■■■□□ 2.23
TMC6-218ENST00000591436 GGA1Q9UJY5 639 aa28.98■■■□□ 2.23
TMC6-218ENST00000591436 CNTNAP1P78357 1384 aa28.98■■■□□ 2.23
TMC6-218ENST00000591436 ECE2O60344 883 aa28.97■■■□□ 2.23
TMC6-218ENST00000591436 GCKRQ14397 625 aa28.97■■■□□ 2.23
TMC6-218ENST00000591436 H7C1W4 665 aa28.96■■■□□ 2.23
TMC6-218ENST00000591436 PSMD14O00487 310 aa28.96■■■□□ 2.23
TMC6-218ENST00000591436 CNOT7Q9UIV1 285 aaKnown RBP28.96■■■□□ 2.23
TMC6-218ENST00000591436 G3V3G9 751 aa28.95■■■□□ 2.22
TMC6-218ENST00000591436 DCAF8Q5TAQ9 597 aa28.95■■■□□ 2.22
TMC6-218ENST00000591436 IFFO2Q5TF58 517 aa28.95■■■□□ 2.22
TMC6-218ENST00000591436 GREM2Q9H772 168 aa28.95■■■□□ 2.22
TMC6-218ENST00000591436 ZBTB12Q9Y330 459 aaPredicted RBP28.95■■■□□ 2.22
TMC6-218ENST00000591436 SPEF2Q9C093 1822 aa28.94■■■□□ 2.22
TMC6-218ENST00000591436 H7C1D1 291 aa28.94■■■□□ 2.22
TMC6-218ENST00000591436 HSPA1AP0DMV8 641 aaKnown RBP28.94■■■□□ 2.22
TMC6-218ENST00000591436 HSPA1BP0DMV9 641 aaKnown RBP28.94■■■□□ 2.22
TMC6-218ENST00000591436 LINS1Q8NG48 757 aa28.94■■■□□ 2.22
TMC6-218ENST00000591436 XDHP47989 1333 aa28.94■■■□□ 2.22
TMC6-218ENST00000591436 SHTN1A0MZ66 631 aa28.93■■■□□ 2.22
TMC6-218ENST00000591436 FMR1Q06787 632 aaKnown RBP eCLIP28.93■■■□□ 2.22
TMC6-218ENST00000591436 MICALL2Q8IY33 904 aa28.93■■■□□ 2.22
TMC6-218ENST00000591436 KCNQ5Q9NR82 932 aa28.93■■■□□ 2.22
TMC6-218ENST00000591436 TRPM7Q96QT4 1865 aa28.92■■■□□ 2.22
TMC6-218ENST00000591436 TRAF5O00463 557 aa28.92■■■□□ 2.22
TMC6-218ENST00000591436 ABT1Q9ULW3 272 aaKnown RBP28.92■■■□□ 2.22
TMC6-218ENST00000591436 RTL9Q8NET4 1388 aa28.91■■■□□ 2.22
TMC6-218ENST00000591436 TRPM4Q8TD43 1214 aa28.91■■■□□ 2.22
TMC6-218ENST00000591436 DPF2Q92785 391 aa28.91■■■□□ 2.22
TMC6-218ENST00000591436 SCN9AQ15858 1988 aa28.9■■■□□ 2.22
TMC6-218ENST00000591436 F6X3S4 739 aa28.9■■■□□ 2.22
TMC6-218ENST00000591436 ATP2B4P23634 1241 aa28.9■■■□□ 2.22
TMC6-218ENST00000591436 VEGFBP49765 207 aa28.9■■■□□ 2.22
TMC6-218ENST00000591436 PLA2G12BQ9BX93 195 aa28.9■■■□□ 2.22
TMC6-218ENST00000591436 BSDC1Q9NW68 430 aaPredicted RBP28.9■■■□□ 2.22
TMC6-218ENST00000591436 HIRAP54198 1017 aaPredicted RBP28.89■■■□□ 2.22
TMC6-218ENST00000591436 DEFB115Q30KQ5 88 aa28.89■■■□□ 2.22
TMC6-218ENST00000591436 RPS12P25398 132 aaKnown RBP28.88■■■□□ 2.21
TMC6-218ENST00000591436 CASP7P55210 303 aa28.88■■■□□ 2.21
TMC6-218ENST00000591436 ZC3H15Q8WU90 426 aaKnown RBP28.88■■■□□ 2.21
TMC6-218ENST00000591436 PGAP2Q9UHJ9 254 aa28.88■■■□□ 2.21
TMC6-218ENST00000591436 MINPP1Q9UNW1 487 aa28.88■■■□□ 2.21
TMC6-218ENST00000591436 RASSF10A6NK89 507 aa28.87■■■□□ 2.21
TMC6-218ENST00000591436 IGHMBP2P38935 993 aaKnown RBP28.87■■■□□ 2.21
TMC6-218ENST00000591436 ZNF521Q96K83 1311 aa28.87■■■□□ 2.21
TMC6-218ENST00000591436 ITGA6P23229 1130 aa28.86■■■□□ 2.21
TMC6-218ENST00000591436 FAM161AQ3B820 660 aa28.86■■■□□ 2.21
TMC6-218ENST00000591436 SAMD7Q7Z3H4 446 aa28.86■■■□□ 2.21
TMC6-218ENST00000591436 GLIS2Q9BZE0 524 aaPredicted RBP28.86■■■□□ 2.21
TMC6-218ENST00000591436 VIL1P09327 827 aaKnown RBP28.85■■■□□ 2.21
TMC6-218ENST00000591436 TBC1D10BQ4KMP7 808 aaPredicted RBP28.85■■■□□ 2.21
TMC6-218ENST00000591436 BEND3Q5T5X7 828 aa28.85■■■□□ 2.21
TMC6-218ENST00000591436 COL13A1Q5TAT6 717 aaPredicted RBP28.85■■■□□ 2.21
TMC6-218ENST00000591436 CST9Q5W186 159 aa28.85■■■□□ 2.21
TMC6-218ENST00000591436 CSF1RP07333 972 aa28.84■■■□□ 2.21
TMC6-218ENST00000591436 WTIPA6NIX2 430 aaPredicted RBP28.83■■■□□ 2.21
TMC6-218ENST00000591436 RBM26Q5T8P6 1007 aaKnown RBP28.83■■■□□ 2.21
TMC6-218ENST00000591436 MPHOSPH8Q99549 860 aa28.83■■■□□ 2.21
TMC6-218ENST00000591436 CELF2O95319 508 aaKnown RBP28.82■■■□□ 2.2
TMC6-218ENST00000591436 CCT4P50991 539 aaKnown RBP28.82■■■□□ 2.2
TMC6-218ENST00000591436 PAXIP1Q6ZW49 1069 aaPredicted RBP28.82■■■□□ 2.2
TMC6-218ENST00000591436 CDC37L1Q7L3B6 337 aa28.82■■■□□ 2.2
TMC6-218ENST00000591436 POLR2AP24928 1970 aaKnown RBP28.81■■■□□ 2.2
TMC6-218ENST00000591436 PSME4Q14997 1843 aa28.81■■■□□ 2.2
TMC6-218ENST00000591436 EGFRP00533 1210 aa28.81■■■□□ 2.2
TMC6-218ENST00000591436 MED23Q9ULK4 1368 aa28.8■■■□□ 2.2
TMC6-218ENST00000591436 WDR33Q9C0J8 1336 aaKnown RBP28.8■■■□□ 2.2
TMC6-218ENST00000591436 RSBN1LQ6PCB5 846 aaPredicted RBP28.8■■■□□ 2.2
TMC6-218ENST00000591436 SLC4A10Q6U841 1118 aa28.8■■■□□ 2.2
TMC6-218ENST00000591436 ZNF408Q9H9D4 720 aa28.8■■■□□ 2.2
TMC6-218ENST00000591436 ANKRD18BA2A2Z9 1011 aa28.79■■■□□ 2.2
TMC6-218ENST00000591436 PODNQ7Z5L7 613 aa28.79■■■□□ 2.2
TMC6-218ENST00000591436 USP48Q86UV5 1035 aa28.79■■■□□ 2.2
TMC6-218ENST00000591436 ANKRD2Q9GZV1 360 aa28.79■■■□□ 2.2
TMC6-218ENST00000591436 CHMP3Q9Y3E7 222 aa28.79■■■□□ 2.2
TMC6-218ENST00000591436 TLL2Q9Y6L7 1015 aa28.79■■■□□ 2.2
TMC6-218ENST00000591436 KIF4BQ2VIQ3 1234 aa28.78■■■□□ 2.2
TMC6-218ENST00000591436 AIDAQ96BJ3 306 aa28.78■■■□□ 2.2
TMC6-218ENST00000591436 LEMD3Q9Y2U8 911 aa28.78■■■□□ 2.2
TMC6-218ENST00000591436 USP17L3A6NCW0 530 aa28.77■■■□□ 2.2
TMC6-218ENST00000591436 USP17L4A6NCW7 530 aa28.77■■■□□ 2.2
TMC6-218ENST00000591436 E9PSI1 815 aa28.77■■■□□ 2.2
TMC6-218ENST00000591436 GRM8O00222 908 aa28.77■■■□□ 2.2
TMC6-218ENST00000591436 FOXO4P98177 505 aa28.77■■■□□ 2.2
TMC6-218ENST00000591436 GRM1Q13255 1194 aa28.77■■■□□ 2.2
TMC6-218ENST00000591436 USP17L1Q7RTZ2 530 aa28.77■■■□□ 2.2
TMC6-218ENST00000591436 AGBL3Q8NEM8 1001 aa28.77■■■□□ 2.2
TMC6-218ENST00000591436 C9orf78Q9NZ63 289 aaPredicted RBP28.77■■■□□ 2.2
TMC6-218ENST00000591436 IFIT5Q13325 482 aaKnown RBP28.76■■■□□ 2.19
TMC6-218ENST00000591436 CAPNS2Q96L46 248 aa28.76■■■□□ 2.19
TMC6-218ENST00000591436 ZNF804BA4D1E1 1349 aa28.75■■■□□ 2.19
TMC6-218ENST00000591436 FOXN1O15353 648 aa28.75■■■□□ 2.19
TMC6-218ENST00000591436 ALDH1L1O75891 902 aa28.75■■■□□ 2.19
TMC6-218ENST00000591436 ECE1P42892 770 aa28.75■■■□□ 2.19
TMC6-218ENST00000591436 CYP4F22Q6NT55 531 aa28.75■■■□□ 2.19
TMC6-218ENST00000591436 KRT26Q7Z3Y9 468 aa28.75■■■□□ 2.19
TMC6-218ENST00000591436 DCPSQ96C86 337 aaKnown RBP28.75■■■□□ 2.19
TMC6-218ENST00000591436 SRCIN1Q9C0H9 1055 aa28.75■■■□□ 2.19
TMC6-218ENST00000591436 KCNJ4P48050 445 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms