RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SURF6O75683 361 aaKnown RBP17.67■□□□□ 0.42
CIRBP-228ENST00000590347 KCNA6P17658 529 aa17.67■□□□□ 0.42
CIRBP-228ENST00000590347 WDR24Q96S15 920 aa17.67■□□□□ 0.42
CIRBP-228ENST00000590347 FUT8Q9BYC5 575 aa17.67■□□□□ 0.42
CIRBP-228ENST00000590347 PUF60Q9UHX1 559 aaKnown RBP17.67■□□□□ 0.42
CIRBP-228ENST00000590347 NEMFO60524 1076 aa17.66■□□□□ 0.42
CIRBP-228ENST00000590347 ECM2O94769 699 aaPredicted RBP17.66■□□□□ 0.42
CIRBP-228ENST00000590347 NOM1Q5C9Z4 860 aaKnown RBP17.66■□□□□ 0.42
CIRBP-228ENST00000590347 SULT6B1Q6IMI4 303 aa17.66■□□□□ 0.42
CIRBP-228ENST00000590347 CCAR1Q8IX12 1150 aaKnown RBP17.66■□□□□ 0.42
CIRBP-228ENST00000590347 FAM193AP78312 1265 aa17.66■□□□□ 0.42
CIRBP-228ENST00000590347 CXorf56Q9H5V9 222 aa17.66■□□□□ 0.42
CIRBP-228ENST00000590347 ADAMTS13Q76LX8 1427 aa17.66■□□□□ 0.42
CIRBP-228ENST00000590347 CPS1P31327 1500 aa17.66■□□□□ 0.42
CIRBP-228ENST00000590347 MAGEA9P43362 315 aa17.65■□□□□ 0.42
CIRBP-228ENST00000590347 LONRF2Q1L5Z9 754 aa17.65■□□□□ 0.42
CIRBP-228ENST00000590347 CCDC102AQ96A19 550 aa17.65■□□□□ 0.42
CIRBP-228ENST00000590347 LRRC2Q9BYS8 371 aa17.65■□□□□ 0.42
CIRBP-228ENST00000590347 IRX2Q9BZI1 471 aaPredicted RBP17.65■□□□□ 0.42
CIRBP-228ENST00000590347 FAM135BQ49AJ0 1406 aa17.65■□□□□ 0.42
CIRBP-228ENST00000590347 IL13P35225 146 aa17.65■□□□□ 0.42
CIRBP-228ENST00000590347 STX1AQ16623 288 aa17.65■□□□□ 0.42
CIRBP-228ENST00000590347 LTV1Q96GA3 475 aaPredicted RBP17.65■□□□□ 0.42
CIRBP-228ENST00000590347 SCAND2PQ9GZW5 306 aaPredicted RBP17.65■□□□□ 0.42
CIRBP-228ENST00000590347 COL3A1P02461 1466 aaPredicted RBP17.65■□□□□ 0.42
CIRBP-228ENST00000590347 REREQ9P2R6 1566 aa17.65■□□□□ 0.42
CIRBP-228ENST00000590347 CDC25BP30305 580 aa17.65■□□□□ 0.42
CIRBP-228ENST00000590347 LIG3P49916 1009 aa17.65■□□□□ 0.42
CIRBP-228ENST00000590347 GNG11P61952 73 aa17.65■□□□□ 0.42
CIRBP-228ENST00000590347 KARSQ15046 597 aaKnown RBP17.65■□□□□ 0.42
CIRBP-228ENST00000590347 CTR9Q6PD62 1173 aa17.65■□□□□ 0.42
CIRBP-228ENST00000590347 BICC1Q9H694 974 aaKnown RBP17.65■□□□□ 0.42
CIRBP-228ENST00000590347 TTC21AQ8NDW8 1320 aa17.64■□□□□ 0.42
CIRBP-228ENST00000590347 ATP1A3P13637 1013 aa17.64■□□□□ 0.41
CIRBP-228ENST00000590347 TTC21BQ7Z4L5 1316 aa17.64■□□□□ 0.41
CIRBP-228ENST00000590347 CLGNO14967 610 aa17.64■□□□□ 0.41
CIRBP-228ENST00000590347 DPCR1Q3MIW9 517 aa17.64■□□□□ 0.41
CIRBP-228ENST00000590347 PARP3Q9Y6F1 533 aa17.64■□□□□ 0.41
CIRBP-228ENST00000590347 AATKQ6ZMQ8 1374 aa17.64■□□□□ 0.41
CIRBP-228ENST00000590347 PTPRUQ92729 1446 aa17.64■□□□□ 0.41
CIRBP-228ENST00000590347 THEMISQ8N1K5 641 aaPredicted RBP17.63■□□□□ 0.41
CIRBP-228ENST00000590347 UBXN6Q9BZV1 441 aa17.63■□□□□ 0.41
CIRBP-228ENST00000590347 CEP83Q9Y592 693 aa17.63■□□□□ 0.41
CIRBP-228ENST00000590347 H3BQV1 296 aa17.63■□□□□ 0.41
CIRBP-228ENST00000590347 MNAT1P51948 309 aa17.63■□□□□ 0.41
CIRBP-228ENST00000590347 IFFO2Q5TF58 517 aa17.63■□□□□ 0.41
CIRBP-228ENST00000590347 BRF1Q92994 677 aa17.63■□□□□ 0.41
CIRBP-228ENST00000590347 NRXN3Q9Y4C0 1643 aa17.63■□□□□ 0.41
CIRBP-228ENST00000590347 CCDC172P0C7W6 258 aa17.63■□□□□ 0.41
CIRBP-228ENST00000590347 HSP90B1P14625 803 aaKnown RBP17.63■□□□□ 0.41
CIRBP-228ENST00000590347 TRIM65Q6PJ69 517 aa17.63■□□□□ 0.41
CIRBP-228ENST00000590347 SDF4Q9BRK5 362 aa17.63■□□□□ 0.41
CIRBP-228ENST00000590347 PPP2R3AQ06190 1150 aa17.62■□□□□ 0.41
CIRBP-228ENST00000590347 FBXW10Q5XX13 1052 aa17.62■□□□□ 0.41
CIRBP-228ENST00000590347 EXOC4Q96A65 974 aa17.62■□□□□ 0.41
CIRBP-228ENST00000590347 GDAP1L1Q96MZ0 367 aa17.62■□□□□ 0.41
CIRBP-228ENST00000590347 DESI2Q9BSY9 194 aa17.62■□□□□ 0.41
CIRBP-228ENST00000590347 KIF2AO00139 706 aaPredicted RBP17.62■□□□□ 0.41
CIRBP-228ENST00000590347 SUFUQ9UMX1 484 aa17.62■□□□□ 0.41
CIRBP-228ENST00000590347 AKAP2Q9Y2D5 859 aa17.62■□□□□ 0.41
CIRBP-228ENST00000590347 ELP1O95163 1332 aa17.62■□□□□ 0.41
CIRBP-228ENST00000590347 SARM1Q6SZW1 724 aa17.61■□□□□ 0.41
CIRBP-228ENST00000590347 A0A1B0GVL5 298 aa17.61■□□□□ 0.41
CIRBP-228ENST00000590347 RHOXF2BP0C7M4 288 aa17.61■□□□□ 0.41
CIRBP-228ENST00000590347 CCDC158Q5M9N0 1113 aa17.61■□□□□ 0.41
CIRBP-228ENST00000590347 RBM43Q6ZSC3 357 aaKnown RBP17.61■□□□□ 0.41
CIRBP-228ENST00000590347 RHOXF2Q9BQY4 288 aa17.61■□□□□ 0.41
CIRBP-228ENST00000590347 CPSF1Q10570 1443 aaKnown RBP17.61■□□□□ 0.41
CIRBP-228ENST00000590347 EDC4Q6P2E9 1401 aaKnown RBP17.61■□□□□ 0.41
CIRBP-228ENST00000590347 KINO60870 393 aaKnown RBP17.61■□□□□ 0.41
CIRBP-228ENST00000590347 EIF4A2Q14240 407 aaKnown RBP17.61■□□□□ 0.41
CIRBP-228ENST00000590347 CEP57L1Q8IYX8 460 aa17.61■□□□□ 0.41
CIRBP-228ENST00000590347 PDILTQ8N807 584 aa17.61■□□□□ 0.41
CIRBP-228ENST00000590347 DHX58Q96C10 678 aa17.61■□□□□ 0.41
CIRBP-228ENST00000590347 ME1P48163 572 aa17.6■□□□□ 0.41
CIRBP-228ENST00000590347 DPF2Q92785 391 aa17.6■□□□□ 0.41
CIRBP-228ENST00000590347 EFCAB8A8MWE9 144 aa17.6■□□□□ 0.41
CIRBP-228ENST00000590347 LRRFIP1Q32MZ4 808 aaKnown RBP17.6■□□□□ 0.41
CIRBP-228ENST00000590347 FSIP1Q8NA03 581 aa17.6■□□□□ 0.41
CIRBP-228ENST00000590347 FAM227BQ96M60 508 aa17.6■□□□□ 0.41
CIRBP-228ENST00000590347 BRMS1Q9HCU9 246 aa17.6■□□□□ 0.41
CIRBP-228ENST00000590347 PNPLA6Q8IY17 1366 aa17.6■□□□□ 0.41
CIRBP-228ENST00000590347 FOXO3O43524 673 aa17.59■□□□□ 0.41
CIRBP-228ENST00000590347 PDE6BP35913 854 aa17.59■□□□□ 0.41
CIRBP-228ENST00000590347 KAT2BQ92831 832 aa17.59■□□□□ 0.41
CIRBP-228ENST00000590347 HINFPQ9BQA5 517 aa17.59■□□□□ 0.41
CIRBP-228ENST00000590347 GSDMDP57764 484 aa17.59■□□□□ 0.41
CIRBP-228ENST00000590347 NLRP6P59044 892 aa17.59■□□□□ 0.41
CIRBP-228ENST00000590347 OS9Q13438 667 aaPredicted RBP17.59■□□□□ 0.41
CIRBP-228ENST00000590347 LRRC31Q6UY01 552 aa17.59■□□□□ 0.41
CIRBP-228ENST00000590347 ZRSR1Q15695 479 aaKnown RBP17.58■□□□□ 0.41
CIRBP-228ENST00000590347 VPS53Q5VIR6 699 aa17.58■□□□□ 0.41
CIRBP-228ENST00000590347 CCDC73Q6ZRK6 1079 aa17.58■□□□□ 0.41
CIRBP-228ENST00000590347 CNNM3Q8NE01 707 aa17.58■□□□□ 0.41
CIRBP-228ENST00000590347 PI4K2BQ8TCG2 481 aa17.58■□□□□ 0.41
CIRBP-228ENST00000590347 RBM8AQ9Y5S9 174 aaKnown RBP17.58■□□□□ 0.41
CIRBP-228ENST00000590347 USP32Q8NFA0 1604 aa17.58■□□□□ 0.41
CIRBP-228ENST00000590347 A0A0U1RQJ8 604 aa17.58■□□□□ 0.4
CIRBP-228ENST00000590347 TMEM232C9JQI7 657 aa17.58■□□□□ 0.4
CIRBP-228ENST00000590347 MAP2K2P36507 400 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms