RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 CCDC152Q4G0S7 254 aa23.17■■□□□ 1.3
H3F3B-209ENST00000589949 MICALL2Q8IY33 904 aa23.17■■□□□ 1.3
H3F3B-209ENST00000589949 TNS4Q8IZW8 715 aa23.17■■□□□ 1.3
H3F3B-209ENST00000589949 SCN9AQ15858 1988 aa23.16■■□□□ 1.3
H3F3B-209ENST00000589949 NCBP3Q53F19 620 aaKnown RBP23.16■■□□□ 1.3
H3F3B-209ENST00000589949 DLK2Q6UY11 383 aa23.16■■□□□ 1.3
H3F3B-209ENST00000589949 STK31Q9BXU1 1019 aa23.16■■□□□ 1.3
H3F3B-209ENST00000589949 WDR33Q9C0J8 1336 aaKnown RBP23.15■■□□□ 1.3
H3F3B-209ENST00000589949 NEURL1BA8MQ27 555 aa23.15■■□□□ 1.3
H3F3B-209ENST00000589949 ANP32CO43423 234 aa23.15■■□□□ 1.3
H3F3B-209ENST00000589949 UFL1O94874 794 aa23.15■■□□□ 1.3
H3F3B-209ENST00000589949 CTSWP56202 376 aa23.15■■□□□ 1.3
H3F3B-209ENST00000589949 SAMD7Q7Z3H4 446 aa23.15■■□□□ 1.3
H3F3B-209ENST00000589949 TTLL11Q8NHH1 800 aa23.15■■□□□ 1.3
H3F3B-209ENST00000589949 CHMP4AQ9BY43 222 aa23.15■■□□□ 1.3
H3F3B-209ENST00000589949 SPINK5Q9NQ38 1064 aaPredicted RBP23.15■■□□□ 1.3
H3F3B-209ENST00000589949 WBP1LQ9NX94 342 aa23.15■■□□□ 1.3
H3F3B-209ENST00000589949 TRPM7Q96QT4 1865 aa23.15■■□□□ 1.3
H3F3B-209ENST00000589949 HSP90B1P14625 803 aaKnown RBP23.14■■□□□ 1.29
H3F3B-209ENST00000589949 DPF2Q92785 391 aa23.14■■□□□ 1.29
H3F3B-209ENST00000589949 EYA3Q99504 573 aa23.14■■□□□ 1.29
H3F3B-209ENST00000589949 ANKIB1Q9P2G1 1089 aa23.14■■□□□ 1.29
H3F3B-209ENST00000589949 GREM2Q9H772 168 aa23.13■■□□□ 1.29
H3F3B-209ENST00000589949 H7C1W4 665 aa23.12■■□□□ 1.29
H3F3B-209ENST00000589949 VAMP4O75379 141 aa23.12■■□□□ 1.29
H3F3B-209ENST00000589949 CYP4F22Q6NT55 531 aa23.12■■□□□ 1.29
H3F3B-209ENST00000589949 ANKRD18AQ8IVF6 992 aa23.12■■□□□ 1.29
H3F3B-209ENST00000589949 ZC3H15Q8WU90 426 aaKnown RBP23.12■■□□□ 1.29
H3F3B-209ENST00000589949 ZC3H12CQ9C0D7 883 aaKnown RBP23.12■■□□□ 1.29
H3F3B-209ENST00000589949 GGA1Q9UJY5 639 aa23.12■■□□□ 1.29
H3F3B-209ENST00000589949 TLL2Q9Y6L7 1015 aa23.12■■□□□ 1.29
H3F3B-209ENST00000589949 H7C1D1 291 aa23.11■■□□□ 1.29
H3F3B-209ENST00000589949 CELF2O95319 508 aaKnown RBP23.11■■□□□ 1.29
H3F3B-209ENST00000589949 FLIIQ13045 1269 aa23.11■■□□□ 1.29
H3F3B-209ENST00000589949 TBC1D10BQ4KMP7 808 aaPredicted RBP23.11■■□□□ 1.29
H3F3B-209ENST00000589949 UBE3BQ7Z3V4 1068 aa23.11■■□□□ 1.29
H3F3B-209ENST00000589949 WDR63Q8IWG1 891 aa23.11■■□□□ 1.29
H3F3B-209ENST00000589949 CAPNS2Q96L46 248 aa23.11■■□□□ 1.29
H3F3B-209ENST00000589949 CAPN15O75808 1086 aa23.1■■□□□ 1.29
H3F3B-209ENST00000589949 VIL1P09327 827 aaKnown RBP23.1■■□□□ 1.29
H3F3B-209ENST00000589949 CASP7P55210 303 aa23.1■■□□□ 1.29
H3F3B-209ENST00000589949 EXOSC9Q06265 439 aaKnown RBP23.1■■□□□ 1.29
H3F3B-209ENST00000589949 NEXNQ0ZGT2 675 aa23.1■■□□□ 1.29
H3F3B-209ENST00000589949 GCKRQ14397 625 aa23.09■■□□□ 1.29
H3F3B-209ENST00000589949 SAPCD2Q86UD0 394 aa23.09■■□□□ 1.29
H3F3B-209ENST00000589949 USP48Q86UV5 1035 aa23.09■■□□□ 1.29
H3F3B-209ENST00000589949 XDHP47989 1333 aa23.08■■□□□ 1.29
H3F3B-209ENST00000589949 THSD7BQ9C0I4 1608 aa23.08■■□□□ 1.29
H3F3B-209ENST00000589949 RPS12P25398 132 aaKnown RBP23.08■■□□□ 1.29
H3F3B-209ENST00000589949 GRM1Q13255 1194 aa23.08■■□□□ 1.29
H3F3B-209ENST00000589949 RBM26Q5T8P6 1007 aaKnown RBP23.08■■□□□ 1.29
H3F3B-209ENST00000589949 CDC37L1Q7L3B6 337 aa23.08■■□□□ 1.29
H3F3B-209ENST00000589949 MINPP1Q9UNW1 487 aa23.08■■□□□ 1.29
H3F3B-209ENST00000589949 ASTN2O75129 1339 aaPredicted RBP23.08■■□□□ 1.28
H3F3B-209ENST00000589949 AOC2O75106 756 aa23.07■■□□□ 1.28
H3F3B-209ENST00000589949 CTCFP49711 727 aaPredicted RBP23.07■■□□□ 1.28
H3F3B-209ENST00000589949 LBX1P52954 281 aa23.07■■□□□ 1.28
H3F3B-209ENST00000589949 PAXIP1Q6ZW49 1069 aaPredicted RBP23.07■■□□□ 1.28
H3F3B-209ENST00000589949 ZNF408Q9H9D4 720 aa23.07■■□□□ 1.28
H3F3B-209ENST00000589949 MYH3P11055 1940 aa23.06■■□□□ 1.28
H3F3B-209ENST00000589949 SPEF2Q9C093 1822 aa23.06■■□□□ 1.28
H3F3B-209ENST00000589949 FKBP5Q13451 457 aaPredicted RBP23.06■■□□□ 1.28
H3F3B-209ENST00000589949 DNAAF4Q8WXU2 420 aa23.06■■□□□ 1.28
H3F3B-209ENST00000589949 AIDAQ96BJ3 306 aa23.06■■□□□ 1.28
H3F3B-209ENST00000589949 CDC5LQ99459 802 aaKnown RBP23.06■■□□□ 1.28
H3F3B-209ENST00000589949 PRDM10Q9NQV6 1147 aa23.06■■□□□ 1.28
H3F3B-209ENST00000589949 BSDC1Q9NW68 430 aaPredicted RBP23.06■■□□□ 1.28
H3F3B-209ENST00000589949 HSPA8P11142 646 aaKnown RBP23.05■■□□□ 1.28
H3F3B-209ENST00000589949 ATP2B4P23634 1241 aa23.05■■□□□ 1.28
H3F3B-209ENST00000589949 FAM9BQ8IZU0 186 aa23.05■■□□□ 1.28
H3F3B-209ENST00000589949 GMLQ99445 158 aa23.05■■□□□ 1.28
H3F3B-209ENST00000589949 PLA2G12BQ9BX93 195 aa23.05■■□□□ 1.28
H3F3B-209ENST00000589949 F6X3S4 739 aa23.04■■□□□ 1.28
H3F3B-209ENST00000589949 LINS1Q8NG48 757 aa23.04■■□□□ 1.28
H3F3B-209ENST00000589949 POLR2AP24928 1970 aaKnown RBP23.03■■□□□ 1.28
H3F3B-209ENST00000589949 ADM5C9JUS6 153 aa23.03■■□□□ 1.28
H3F3B-209ENST00000589949 G3V3G9 751 aa23.03■■□□□ 1.28
H3F3B-209ENST00000589949 ECE1P42892 770 aa23.03■■□□□ 1.28
H3F3B-209ENST00000589949 MAP2K1Q02750 393 aaPredicted RBP23.03■■□□□ 1.28
H3F3B-209ENST00000589949 KIF4BQ2VIQ3 1234 aa23.03■■□□□ 1.28
H3F3B-209ENST00000589949 FAM161AQ3B820 660 aa23.03■■□□□ 1.28
H3F3B-209ENST00000589949 DCAF8Q5TAQ9 597 aa23.03■■□□□ 1.28
H3F3B-209ENST00000589949 RSBN1LQ6PCB5 846 aaPredicted RBP23.03■■□□□ 1.28
H3F3B-209ENST00000589949 KRT26Q7Z3Y9 468 aa23.03■■□□□ 1.28
H3F3B-209ENST00000589949 TXNRD3Q86VQ6 643 aa23.03■■□□□ 1.28
H3F3B-209ENST00000589949 ZNF609O15014 1411 aa23.02■■□□□ 1.28
H3F3B-209ENST00000589949 CSF1RP07333 972 aa23.02■■□□□ 1.28
H3F3B-209ENST00000589949 ZNF280AP59817 542 aaPredicted RBP23.02■■□□□ 1.28
H3F3B-209ENST00000589949 PSME4Q14997 1843 aa23.02■■□□□ 1.28
H3F3B-209ENST00000589949 ITGA6P23229 1130 aa23.01■■□□□ 1.27
H3F3B-209ENST00000589949 KLRK1P26718 216 aa23.01■■□□□ 1.27
H3F3B-209ENST00000589949 CCT4P50991 539 aaKnown RBP23.01■■□□□ 1.27
H3F3B-209ENST00000589949 ZIC5Q96T25 663 aa23.01■■□□□ 1.27
H3F3B-209ENST00000589949 MXD3Q9BW11 206 aa23.01■■□□□ 1.27
H3F3B-209ENST00000589949 BEND3Q5T5X7 828 aa23■■□□□ 1.27
H3F3B-209ENST00000589949 AGBL3Q8NEM8 1001 aa23■■□□□ 1.27
H3F3B-209ENST00000589949 HHIPL1Q96JK4 782 aa23■■□□□ 1.27
H3F3B-209ENST00000589949 GGA3Q9NZ52 723 aa23■■□□□ 1.27
H3F3B-209ENST00000589949 ZNF646O15015 1829 aaPredicted RBP23■■□□□ 1.27
H3F3B-209ENST00000589949 MED23Q9ULK4 1368 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms