RNA–Protein interactions for RNA: ENST00000589669.1

CCDC130-211, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-211ENST00000589669 MRS2Q9HD23 443 aa17.06■□□□□ 0.32
CCDC130-211ENST00000589669 DBF4Q9UBU7 674 aaPredicted RBP17.06■□□□□ 0.32
CCDC130-211ENST00000589669 LAMB4A4D0S4 1761 aa17.06■□□□□ 0.32
CCDC130-211ENST00000589669 IBTKQ9P2D0 1353 aaPredicted RBP17.05■□□□□ 0.32
CCDC130-211ENST00000589669 PPP1R3GB7ZBB8 358 aa17.05■□□□□ 0.32
CCDC130-211ENST00000589669 AIMP1Q12904 312 aaKnown RBP17.05■□□□□ 0.32
CCDC130-211ENST00000589669 TCIRG1Q13488 830 aa17.05■□□□□ 0.32
CCDC130-211ENST00000589669 HSP90AB3PQ58FF7 597 aa17.05■□□□□ 0.32
CCDC130-211ENST00000589669 SLC10A5Q5PT55 438 aa17.05■□□□□ 0.32
CCDC130-211ENST00000589669 NUTM1Q86Y26 1132 aa17.05■□□□□ 0.32
CCDC130-211ENST00000589669 CHPF2Q9P2E5 772 aa17.05■□□□□ 0.32
CCDC130-211ENST00000589669 LTBP3Q9NS15 1303 aa17.04■□□□□ 0.32
CCDC130-211ENST00000589669 ANKRD31Q8N7Z5 1873 aa17.04■□□□□ 0.32
CCDC130-211ENST00000589669 POTEB3A0JP26 581 aa17.04■□□□□ 0.32
CCDC130-211ENST00000589669 NTSR2O95665 410 aa17.04■□□□□ 0.32
CCDC130-211ENST00000589669 HOXA10P31260 410 aaPredicted RBP17.04■□□□□ 0.32
CCDC130-211ENST00000589669 POTEBQ6S5H4 581 aa17.04■□□□□ 0.32
CCDC130-211ENST00000589669 ANKRD13DQ6ZTN6 518 aa17.04■□□□□ 0.32
CCDC130-211ENST00000589669 HS3ST6Q96QI5 342 aa17.04■□□□□ 0.32
CCDC130-211ENST00000589669 KCNK17Q96T54 332 aa17.04■□□□□ 0.32
CCDC130-211ENST00000589669 CHMP4AQ9BY43 222 aa17.04■□□□□ 0.32
CCDC130-211ENST00000589669 HYPKQ9NX55 129 aa17.04■□□□□ 0.32
CCDC130-211ENST00000589669 KDM2BQ8NHM5 1336 aa17.03■□□□□ 0.32
CCDC130-211ENST00000589669 WWC1Q8IX03 1113 aa17.03■□□□□ 0.32
CCDC130-211ENST00000589669 UTP14AQ9BVJ6 771 aaKnown RBP17.03■□□□□ 0.32
CCDC130-211ENST00000589669 DLEC1Q9Y238 1755 aa17.02■□□□□ 0.32
CCDC130-211ENST00000589669 POTEEQ6S8J3 1075 aa17.02■□□□□ 0.32
CCDC130-211ENST00000589669 PLBD2Q8NHP8 589 aa17.02■□□□□ 0.32
CCDC130-211ENST00000589669 RNF123Q5XPI4 1314 aa17.01■□□□□ 0.31
CCDC130-211ENST00000589669 GLTPD2A6NH11 291 aa17.01■□□□□ 0.31
CCDC130-211ENST00000589669 PADI6Q6TGC4 694 aa17.01■□□□□ 0.31
CCDC130-211ENST00000589669 NLRP10Q86W26 655 aa17.01■□□□□ 0.31
CCDC130-211ENST00000589669 C8orf58Q8NAV2 365 aa17.01■□□□□ 0.31
CCDC130-211ENST00000589669 TAOK3Q9H2K8 898 aa17.01■□□□□ 0.31
CCDC130-211ENST00000589669 NMRK2Q9NPI5 230 aa17.01■□□□□ 0.31
CCDC130-211ENST00000589669 ELL2O00472 640 aaPredicted RBP17■□□□□ 0.31
CCDC130-211ENST00000589669 TOMM70O94826 608 aa17■□□□□ 0.31
CCDC130-211ENST00000589669 RIC1Q4ADV7 1423 aa17■□□□□ 0.31
CCDC130-211ENST00000589669 CCDC93Q567U6 631 aa17■□□□□ 0.31
CCDC130-211ENST00000589669 RTKN2Q8IZC4 609 aa17■□□□□ 0.31
CCDC130-211ENST00000589669 CCDC102AQ96A19 550 aa17■□□□□ 0.31
CCDC130-211ENST00000589669 NLRP3Q96P20 1036 aa17■□□□□ 0.31
CCDC130-211ENST00000589669 CRAMP1Q96RY5 1269 aa17■□□□□ 0.31
CCDC130-211ENST00000589669 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
CCDC130-211ENST00000589669 ABCC12Q96J65 1359 aa17■□□□□ 0.31
CCDC130-211ENST00000589669 IL16Q14005 1332 aa16.99■□□□□ 0.31
CCDC130-211ENST00000589669 NUP98P52948 1817 aa16.99■□□□□ 0.31
CCDC130-211ENST00000589669 IRF6O14896 467 aa16.99■□□□□ 0.31
CCDC130-211ENST00000589669 PSEN2P49810 448 aa16.99■□□□□ 0.31
CCDC130-211ENST00000589669 PRSS12P56730 875 aa16.99■□□□□ 0.31
CCDC130-211ENST00000589669 TRIM28Q13263 835 aaKnown RBP16.99■□□□□ 0.31
CCDC130-211ENST00000589669 CC2D2BQ6DHV5 1058 aa16.99■□□□□ 0.31
CCDC130-211ENST00000589669 ZNF687Q8N1G0 1237 aa16.99■□□□□ 0.31
CCDC130-211ENST00000589669 RBM17Q96I25 401 aaKnown RBP16.99■□□□□ 0.31
CCDC130-211ENST00000589669 CEP350Q5VT06 3117 aa16.99■□□□□ 0.31
CCDC130-211ENST00000589669 SENP3-EIF4A1A0A087X0R7 540 aa16.98■□□□□ 0.31
CCDC130-211ENST00000589669 FKBP4Q02790 459 aaKnown RBP eCLIP16.98■□□□□ 0.31
CCDC130-211ENST00000589669 GRIPAP1Q4V328 841 aa16.98■□□□□ 0.31
CCDC130-211ENST00000589669 RPGRQ92834 1020 aaKnown RBP16.98■□□□□ 0.31
CCDC130-211ENST00000589669 CDCA7LQ96GN5 454 aa16.98■□□□□ 0.31
CCDC130-211ENST00000589669 ISCA1Q9BUE6 129 aa16.98■□□□□ 0.31
CCDC130-211ENST00000589669 RRAGCQ9HB90 399 aa16.98■□□□□ 0.31
CCDC130-211ENST00000589669 TRMT112Q9UI30 125 aaKnown RBP16.98■□□□□ 0.31
CCDC130-211ENST00000589669 CCDC30Q5VVM6 783 aa16.97■□□□□ 0.31
CCDC130-211ENST00000589669 WDR63Q8IWG1 891 aa16.97■□□□□ 0.31
CCDC130-211ENST00000589669 TTC13Q8NBP0 860 aa16.97■□□□□ 0.31
CCDC130-211ENST00000589669 SLX4Q8IY92 1834 aa16.97■□□□□ 0.31
CCDC130-211ENST00000589669 SBF1O95248 1867 aa16.97■□□□□ 0.31
CCDC130-211ENST00000589669 COL11A2P13942 1736 aaPredicted RBP16.96■□□□□ 0.31
CCDC130-211ENST00000589669 ARHGAP33O14559 1287 aa16.96■□□□□ 0.31
CCDC130-211ENST00000589669 VEGFAP15692 232 aaPredicted RBP16.96■□□□□ 0.31
CCDC130-211ENST00000589669 TSPYL6Q8N831 410 aa16.96■□□□□ 0.31
CCDC130-211ENST00000589669 SH3TC1Q8TE82 1336 aa16.96■□□□□ 0.3
CCDC130-211ENST00000589669 HSPA6P17066 643 aa16.95■□□□□ 0.3
CCDC130-211ENST00000589669 OLFM4Q6UX06 510 aa16.95■□□□□ 0.3
CCDC130-211ENST00000589669 C16orf71Q8IYS4 520 aaPredicted RBP16.95■□□□□ 0.3
CCDC130-211ENST00000589669 SYNE4Q8N205 404 aa16.95■□□□□ 0.3
CCDC130-211ENST00000589669 RBM46Q8TBY0 533 aaKnown RBP16.95■□□□□ 0.3
CCDC130-211ENST00000589669 TSR2Q969E8 191 aaKnown RBP16.95■□□□□ 0.3
CCDC130-211ENST00000589669 PSMD1Q99460 953 aa16.95■□□□□ 0.3
CCDC130-211ENST00000589669 PHAXQ9H814 394 aaKnown RBP16.95■□□□□ 0.3
CCDC130-211ENST00000589669 BBOX1O75936 387 aa16.94■□□□□ 0.3
CCDC130-211ENST00000589669 HCLS1P14317 486 aaPredicted RBP16.94■□□□□ 0.3
CCDC130-211ENST00000589669 PBX2P40425 430 aa16.94■□□□□ 0.3
CCDC130-211ENST00000589669 RIC3Q7Z5B4 369 aa16.94■□□□□ 0.3
CCDC130-211ENST00000589669 FAM198AQ9UFP1 575 aa16.94■□□□□ 0.3
CCDC130-211ENST00000589669 POTECB2RU33 542 aa16.93■□□□□ 0.3
CCDC130-211ENST00000589669 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
CCDC130-211ENST00000589669 TRIM66O15016 1216 aa16.92■□□□□ 0.3
CCDC130-211ENST00000589669 FSTL1Q12841 308 aa16.92■□□□□ 0.3
CCDC130-211ENST00000589669 TWISTNBQ3B726 338 aaPredicted RBP16.92■□□□□ 0.3
CCDC130-211ENST00000589669 FAM9BQ8IZU0 186 aa16.92■□□□□ 0.3
CCDC130-211ENST00000589669 ZNF277Q9NRM2 450 aaPredicted RBP16.92■□□□□ 0.3
CCDC130-211ENST00000589669 TSKSQ9UJT2 592 aa16.92■□□□□ 0.3
CCDC130-211ENST00000589669 FER1L6Q2WGJ9 1857 aa16.92■□□□□ 0.3
CCDC130-211ENST00000589669 PPEF1O14829 653 aaPredicted RBP16.91■□□□□ 0.3
CCDC130-211ENST00000589669 DDX58O95786 925 aaKnown RBP16.91■□□□□ 0.3
CCDC130-211ENST00000589669 FAM161AQ3B820 660 aa16.91■□□□□ 0.3
CCDC130-211ENST00000589669 PROX2Q3B8N5 592 aa16.91■□□□□ 0.3
CCDC130-211ENST00000589669 DMRTA1Q5VZB9 504 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms