RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 CHL1O00533 1208 aa19.82■□□□□ 0.76
ACTN4-211ENST00000589528 EGFRP00533 1210 aa19.82■□□□□ 0.76
ACTN4-211ENST00000589528 ZC3H12CQ9C0D7 883 aaKnown RBP19.82■□□□□ 0.76
ACTN4-211ENST00000589528 SAGE1Q9NXZ1 904 aa19.82■□□□□ 0.76
ACTN4-211ENST00000589528 RALBP1Q15311 655 aa19.81■□□□□ 0.76
ACTN4-211ENST00000589528 ISCA1Q9BUE6 129 aa19.81■□□□□ 0.76
ACTN4-211ENST00000589528 GGA3Q9NZ52 723 aa19.81■□□□□ 0.76
ACTN4-211ENST00000589528 ANKIB1Q9P2G1 1089 aa19.81■□□□□ 0.76
ACTN4-211ENST00000589528 SCN9AQ15858 1988 aa19.81■□□□□ 0.76
ACTN4-211ENST00000589528 FAM155AB1AL88 458 aaPredicted RBP19.8■□□□□ 0.76
ACTN4-211ENST00000589528 IRS4O14654 1257 aaPredicted RBP19.8■□□□□ 0.76
ACTN4-211ENST00000589528 TRPA1O75762 1119 aa19.8■□□□□ 0.76
ACTN4-211ENST00000589528 HOXB7P09629 217 aa19.8■□□□□ 0.76
ACTN4-211ENST00000589528 HSP90B1P14625 803 aaKnown RBP19.8■□□□□ 0.76
ACTN4-211ENST00000589528 RPS8P62241 208 aaKnown RBP19.8■□□□□ 0.76
ACTN4-211ENST00000589528 KIF23Q02241 960 aaPredicted RBP19.8■□□□□ 0.76
ACTN4-211ENST00000589528 TBC1D16Q8TBP0 767 aa19.8■□□□□ 0.76
ACTN4-211ENST00000589528 KCNQ5Q9NR82 932 aa19.8■□□□□ 0.76
ACTN4-211ENST00000589528 HYPKQ9NX55 129 aa19.8■□□□□ 0.76
ACTN4-211ENST00000589528 RTL9Q8NET4 1388 aa19.8■□□□□ 0.76
ACTN4-211ENST00000589528 PDE4DIPQ5VU43 2346 aa19.8■□□□□ 0.76
ACTN4-211ENST00000589528 UFL1O94874 794 aa19.78■□□□□ 0.76
ACTN4-211ENST00000589528 WDR43Q15061 677 aaKnown RBP eCLIP19.78■□□□□ 0.763e-7■□□□□ 10.2
ACTN4-211ENST00000589528 RIC3Q7Z5B4 369 aa19.78■□□□□ 0.76
ACTN4-211ENST00000589528 GGA1Q9UJY5 639 aa19.78■□□□□ 0.76
ACTN4-211ENST00000589528 SLC10A3P09131 477 aa19.77■□□□□ 0.76
ACTN4-211ENST00000589528 VIL1P09327 827 aaKnown RBP19.77■□□□□ 0.76
ACTN4-211ENST00000589528 GOLGA2Q08379 1002 aa19.77■□□□□ 0.76
ACTN4-211ENST00000589528 RNF186Q9NXI6 227 aa19.77■□□□□ 0.76
ACTN4-211ENST00000589528 COL4A1P02462 1669 aa19.77■□□□□ 0.76
ACTN4-211ENST00000589528 RUNDC1Q96C34 613 aa19.76■□□□□ 0.75
ACTN4-211ENST00000589528 CDCA5Q96FF9 252 aa19.76■□□□□ 0.75
ACTN4-211ENST00000589528 PSME4Q14997 1843 aa19.75■□□□□ 0.75
ACTN4-211ENST00000589528 TRIM28Q13263 835 aaKnown RBP19.75■□□□□ 0.75
ACTN4-211ENST00000589528 CCDC152Q4G0S7 254 aa19.75■□□□□ 0.75
ACTN4-211ENST00000589528 DUSP27Q5VZP5 1158 aa19.75■□□□□ 0.75
ACTN4-211ENST00000589528 ZBTB38Q8NAP3 1195 aaPredicted RBP19.75■□□□□ 0.75
ACTN4-211ENST00000589528 PODXL2Q9NZ53 605 aa19.75■□□□□ 0.75
ACTN4-211ENST00000589528 TRIM35Q9UPQ4 493 aa19.75■□□□□ 0.75
ACTN4-211ENST00000589528 TNRC18O15417 2968 aaPredicted RBP19.74■□□□□ 0.75
ACTN4-211ENST00000589528 SOX10P56693 466 aa19.74■□□□□ 0.75
ACTN4-211ENST00000589528 SCARF1Q14162 830 aa19.74■□□□□ 0.75
ACTN4-211ENST00000589528 ANGEL2Q5VTE6 544 aaKnown RBP19.74■□□□□ 0.75
ACTN4-211ENST00000589528 REM2Q8IYK8 340 aaPredicted RBP19.74■□□□□ 0.75
ACTN4-211ENST00000589528 AGBL3Q8NEM8 1001 aa19.74■□□□□ 0.75
ACTN4-211ENST00000589528 SEC31BQ9NQW1 1179 aa19.74■□□□□ 0.75
ACTN4-211ENST00000589528 ASTN2O75129 1339 aaPredicted RBP19.74■□□□□ 0.75
ACTN4-211ENST00000589528 MYBBP1AQ9BQG0 1328 aaKnown RBP19.74■□□□□ 0.75
ACTN4-211ENST00000589528 RSBN1LQ6PCB5 846 aaPredicted RBP19.73■□□□□ 0.75
ACTN4-211ENST00000589528 CSRNP1Q96S65 589 aa19.73■□□□□ 0.75
ACTN4-211ENST00000589528 CTU1Q7Z7A3 348 aaKnown RBP19.72■□□□□ 0.75
ACTN4-211ENST00000589528 MYD88Q99836 296 aa19.72■□□□□ 0.75
ACTN4-211ENST00000589528 PAPPA2Q9BXP8 1791 aa19.72■□□□□ 0.75
ACTN4-211ENST00000589528 PDE8AO60658 829 aa19.71■□□□□ 0.75
ACTN4-211ENST00000589528 FKBP1BP68106 108 aa19.71■□□□□ 0.75
ACTN4-211ENST00000589528 RASAL3Q86YV0 1011 aa19.71■□□□□ 0.75
ACTN4-211ENST00000589528 ANKRD18AQ8IVF6 992 aa19.71■□□□□ 0.75
ACTN4-211ENST00000589528 CCDC85AQ96PX6 553 aaPredicted RBP19.71■□□□□ 0.75
ACTN4-211ENST00000589528 USP17L8P0C7I0 530 aa19.7■□□□□ 0.74
ACTN4-211ENST00000589528 ZNF280AP59817 542 aaPredicted RBP19.7■□□□□ 0.74
ACTN4-211ENST00000589528 MYOZ2Q9NPC6 264 aa19.7■□□□□ 0.74
ACTN4-211ENST00000589528 MBIPQ9NS73 344 aa19.7■□□□□ 0.74
ACTN4-211ENST00000589528 XDHP47989 1333 aa19.7■□□□□ 0.74
ACTN4-211ENST00000589528 SPEF2Q9C093 1822 aa19.69■□□□□ 0.74
ACTN4-211ENST00000589528 USP17L3A6NCW0 530 aa19.69■□□□□ 0.74
ACTN4-211ENST00000589528 USP17L4A6NCW7 530 aa19.69■□□□□ 0.74
ACTN4-211ENST00000589528 PCCAP05165 728 aaPredicted RBP19.69■□□□□ 0.74
ACTN4-211ENST00000589528 USP17L1Q7RTZ2 530 aa19.69■□□□□ 0.74
ACTN4-211ENST00000589528 CCDC191Q8NCU4 936 aa19.69■□□□□ 0.74
ACTN4-211ENST00000589528 PHAXQ9H814 394 aaKnown RBP19.69■□□□□ 0.74
ACTN4-211ENST00000589528 CWC25Q9NXE8 425 aaPredicted RBP19.69■□□□□ 0.74
ACTN4-211ENST00000589528 PCDH10Q9P2E7 1040 aa19.69■□□□□ 0.74
ACTN4-211ENST00000589528 HDAC9Q9UKV0 1011 aa19.69■□□□□ 0.74
ACTN4-211ENST00000589528 MYH3P11055 1940 aa19.68■□□□□ 0.74
ACTN4-211ENST00000589528 ZNF609O15014 1411 aa19.68■□□□□ 0.74
ACTN4-211ENST00000589528 ATP2B4P23634 1241 aa19.68■□□□□ 0.74
ACTN4-211ENST00000589528 TTLL12Q14166 644 aaPredicted RBP19.68■□□□□ 0.74
ACTN4-211ENST00000589528 PITPNM2Q9BZ72 1349 aa19.68■□□□□ 0.74
ACTN4-211ENST00000589528 ELL2O00472 640 aaPredicted RBP19.67■□□□□ 0.74
ACTN4-211ENST00000589528 DDX58O95786 925 aaKnown RBP19.67■□□□□ 0.74
ACTN4-211ENST00000589528 JARID2Q92833 1246 aaPredicted RBP19.67■□□□□ 0.74
ACTN4-211ENST00000589528 FBXW7Q969H0 707 aa19.67■□□□□ 0.74
ACTN4-211ENST00000589528 CDC5LQ99459 802 aaKnown RBP19.67■□□□□ 0.74
ACTN4-211ENST00000589528 NF2P35240 595 aa19.66■□□□□ 0.74
ACTN4-211ENST00000589528 PODNQ7Z5L7 613 aa19.66■□□□□ 0.74
ACTN4-211ENST00000589528 OGFOD1Q8N543 542 aa19.66■□□□□ 0.74
ACTN4-211ENST00000589528 ADAMTS8Q9UP79 889 aa19.66■□□□□ 0.74
ACTN4-211ENST00000589528 SCAF8Q9UPN6 1271 aaKnown RBP19.66■□□□□ 0.74
ACTN4-211ENST00000589528 CALD1Q05682 793 aaKnown RBP19.65■□□□□ 0.74
ACTN4-211ENST00000589528 CHMP4AQ9BY43 222 aa19.65■□□□□ 0.74
ACTN4-211ENST00000589528 GNAI1P63096 354 aa19.64■□□□□ 0.73
ACTN4-211ENST00000589528 PKN2Q16513 984 aaKnown RBP19.64■□□□□ 0.73
ACTN4-211ENST00000589528 MOB2Q70IA6 237 aa19.64■□□□□ 0.73
ACTN4-211ENST00000589528 GMLQ99445 158 aa19.64■□□□□ 0.73
ACTN4-211ENST00000589528 METTL22Q9BUU2 404 aaPredicted RBP19.64■□□□□ 0.73
ACTN4-211ENST00000589528 UBE2Q2LH0YL09 131 aa19.63■□□□□ 0.73
ACTN4-211ENST00000589528 TBC1D8O95759 1140 aa19.63■□□□□ 0.73
ACTN4-211ENST00000589528 DDX10Q13206 875 aaKnown RBP19.63■□□□□ 0.73
ACTN4-211ENST00000589528 IFT57Q9NWB7 429 aa19.63■□□□□ 0.73
ACTN4-211ENST00000589528 HPS5Q9UPZ3 1129 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms