RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 C21orf2O43822 256 aa15.08■□□□□ 0
DNMT1-218ENST00000589294 RAB11FIP3O75154 756 aa15.08■□□□□ 0
DNMT1-218ENST00000589294 LRRC24Q50LG9 513 aa15.08■□□□□ 0
DNMT1-218ENST00000589294 ATG9AQ7Z3C6 839 aa15.08■□□□□ 0
DNMT1-218ENST00000589294 RTKN2Q8IZC4 609 aa15.08■□□□□ 0
DNMT1-218ENST00000589294 PUS3Q9BZE2 481 aaKnown RBP15.08■□□□□ 0
DNMT1-218ENST00000589294 DLEC1Q9Y238 1755 aa15.08■□□□□ 0
DNMT1-218ENST00000589294 ERC1Q8IUD2 1116 aa15.07■□□□□ 0
DNMT1-218ENST00000589294 SIL1Q9H173 461 aa15.07■□□□□ 0
DNMT1-218ENST00000589294 PODXL2Q9NZ53 605 aa15.07■□□□□ 0
DNMT1-218ENST00000589294 CEP126Q9P2H0 1117 aa15.07■□□□□ 0
DNMT1-218ENST00000589294 CHRNDQ07001 517 aa15.06■□□□□ 0
DNMT1-218ENST00000589294 CCDC93Q567U6 631 aa15.06■□□□□ 0
DNMT1-218ENST00000589294 METTL24Q5JXM2 366 aa15.06■□□□□ 0
DNMT1-218ENST00000589294 MPNDQ8N594 471 aa15.06■□□□□ 0
DNMT1-218ENST00000589294 GCC1Q96CN9 775 aa15.06■□□□□ 0
DNMT1-218ENST00000589294 ANKIB1Q9P2G1 1089 aa15.06■□□□□ 0
DNMT1-218ENST00000589294 LEMD3Q9Y2U8 911 aa15.06■□□□□ 0
DNMT1-218ENST00000589294 SLX4Q8IY92 1834 aa15.06■□□□□ 0
DNMT1-218ENST00000589294 PDE8BO95263 885 aa15.05■□□□□ -0
DNMT1-218ENST00000589294 IGHDP01880 384 aa15.05■□□□□ -0
DNMT1-218ENST00000589294 OS9Q13438 667 aaPredicted RBP15.05■□□□□ -0
DNMT1-218ENST00000589294 ZNF219Q9P2Y4 722 aaPredicted RBP15.05■□□□□ -0
DNMT1-218ENST00000589294 NSFL1CQ9UNZ2 370 aaKnown RBP15.05■□□□□ -0
DNMT1-218ENST00000589294 EXOC6BQ9Y2D4 811 aa15.05■□□□□ -0
DNMT1-218ENST00000589294 XDHP47989 1333 aa15.05■□□□□ -0
DNMT1-218ENST00000589294 TAF1P21675 1872 aa15.05■□□□□ -0
DNMT1-218ENST00000589294 SASH1O94885 1247 aa15.04■□□□□ -0
DNMT1-218ENST00000589294 ATP2B4P23634 1241 aa15.04■□□□□ -0
DNMT1-218ENST00000589294 GPSM2P81274 684 aa15.04■□□□□ -0
DNMT1-218ENST00000589294 DPP8Q6V1X1 898 aaPredicted RBP15.04■□□□□ -0
DNMT1-218ENST00000589294 VGLL2Q8N8G2 317 aa15.04■□□□□ -0
DNMT1-218ENST00000589294 PSMD1Q99460 953 aa15.04■□□□□ -0
DNMT1-218ENST00000589294 RTFDC1Q9BY42 306 aaPredicted RBP15.04■□□□□ -0
DNMT1-218ENST00000589294 PPP4R2Q9NY27 417 aa15.04■□□□□ -0
DNMT1-218ENST00000589294 AKAP2Q9Y2D5 859 aa15.04■□□□□ -0
DNMT1-218ENST00000589294 BRCA1P38398 1863 aaKnown RBP15.03■□□□□ -0
DNMT1-218ENST00000589294 COL4A1P02462 1669 aa15.03■□□□□ -0
DNMT1-218ENST00000589294 GRIN3BO60391 1043 aa15.03■□□□□ -0
DNMT1-218ENST00000589294 TFCP2Q12800 502 aa15.03■□□□□ -0
DNMT1-218ENST00000589294 UBE4AQ14139 1066 aa15.03■□□□□ -0
DNMT1-218ENST00000589294 GPR162Q16538 588 aa15.03■□□□□ -0
DNMT1-218ENST00000589294 OLFM4Q6UX06 510 aa15.03■□□□□ -0
DNMT1-218ENST00000589294 SMC5Q8IY18 1101 aa15.03■□□□□ -0
DNMT1-218ENST00000589294 SUPT20HQ8NEM7 779 aa15.03■□□□□ -0
DNMT1-218ENST00000589294 HELBQ8NG08 1087 aaPredicted RBP15.03■□□□□ -0
DNMT1-218ENST00000589294 KIF1BPQ96EK5 621 aa15.03■□□□□ -0
DNMT1-218ENST00000589294 VPS33BQ9H267 617 aa15.03■□□□□ -0
DNMT1-218ENST00000589294 GPR108Q9NPR9 543 aa15.03■□□□□ -0
DNMT1-218ENST00000589294 GGA1Q9UJY5 639 aa15.03■□□□□ -0
DNMT1-218ENST00000589294 WWC3Q9ULE0 1092 aa15.03■□□□□ -0
DNMT1-218ENST00000589294 TAF5LO75529 589 aa15.02■□□□□ -0
DNMT1-218ENST00000589294 TBC1D16Q8TBP0 767 aa15.02■□□□□ -0
DNMT1-218ENST00000589294 RHPN1Q8TCX5 695 aa15.02■□□□□ -0
DNMT1-218ENST00000589294 CCDC136Q96JN2 1154 aa15.02■□□□□ -0
DNMT1-218ENST00000589294 LRRCC1Q9C099 1032 aa15.02■□□□□ -0
DNMT1-218ENST00000589294 GOLGB1Q14789 3259 aaKnown RBP15.01□□□□□ -0.01
DNMT1-218ENST00000589294 ZNF804BA4D1E1 1349 aa15.01□□□□□ -0.01
DNMT1-218ENST00000589294 LTBP3Q9NS15 1303 aa15.01□□□□□ -0.01
DNMT1-218ENST00000589294 DCAF8L1A6NGE4 600 aa15.01□□□□□ -0.01
DNMT1-218ENST00000589294 C6orf229H3BNL8 230 aa15.01□□□□□ -0.01
DNMT1-218ENST00000589294 YBX3P16989 372 aaKnown RBP eCLIP15.01□□□□□ -0.01
DNMT1-218ENST00000589294 KCNJ4P48050 445 aa15.01□□□□□ -0.01
DNMT1-218ENST00000589294 FKBP4Q02790 459 aaKnown RBP eCLIP15.01□□□□□ -0.01
DNMT1-218ENST00000589294 PUM3Q15397 648 aaKnown RBP15.01□□□□□ -0.01
DNMT1-218ENST00000589294 ARHGAP27Q6ZUM4 889 aa15.01□□□□□ -0.01
DNMT1-218ENST00000589294 PELP1Q8IZL8 1130 aaKnown RBP15.01□□□□□ -0.01
DNMT1-218ENST00000589294 LPIN2Q92539 896 aa15.01□□□□□ -0.01
DNMT1-218ENST00000589294 EYA3Q99504 573 aa15.01□□□□□ -0.01
DNMT1-218ENST00000589294 POLLQ9UGP5 575 aa15.01□□□□□ -0.01
DNMT1-218ENST00000589294 SNED1Q8TER0 1413 aa15□□□□□ -0.01
DNMT1-218ENST00000589294 FGFR2P21802 821 aa15□□□□□ -0.01
DNMT1-218ENST00000589294 C15orf52Q6ZUT6 534 aaKnown RBP15□□□□□ -0.01
DNMT1-218ENST00000589294 ZC3H12CQ9C0D7 883 aaKnown RBP15□□□□□ -0.01
DNMT1-218ENST00000589294 APBB1O00213 710 aa14.99□□□□□ -0.01
DNMT1-218ENST00000589294 UFL1O94874 794 aa14.99□□□□□ -0.01
DNMT1-218ENST00000589294 IFIT1P09914 478 aaKnown RBP14.99□□□□□ -0.01
DNMT1-218ENST00000589294 ATP2B3Q16720 1220 aa14.99□□□□□ -0.01
DNMT1-218ENST00000589294 WASHC4Q2M389 1173 aa14.99□□□□□ -0.01
DNMT1-218ENST00000589294 CENPQQ7L2Z9 268 aaPredicted RBP14.99□□□□□ -0.01
DNMT1-218ENST00000589294 SLC51AQ86UW1 340 aa14.99□□□□□ -0.01
DNMT1-218ENST00000589294 CLASRPQ8N2M8 674 aaKnown RBP14.99□□□□□ -0.01
DNMT1-218ENST00000589294 TAOK3Q9H2K8 898 aa14.99□□□□□ -0.01
DNMT1-218ENST00000589294 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
DNMT1-218ENST00000589294 LRRC37AA6NMS7 1700 aa14.99□□□□□ -0.01
DNMT1-218ENST00000589294 ARFGEF1Q9Y6D6 1849 aa14.99□□□□□ -0.01
DNMT1-218ENST00000589294 WTIPA6NIX2 430 aaPredicted RBP14.98□□□□□ -0.01
DNMT1-218ENST00000589294 NFKBIEO00221 500 aa14.98□□□□□ -0.01
DNMT1-218ENST00000589294 SLC5A1P13866 664 aa14.98□□□□□ -0.01
DNMT1-218ENST00000589294 TIMM10P62072 90 aa14.98□□□□□ -0.01
DNMT1-218ENST00000589294 TNNI3KQ59H18 835 aa14.98□□□□□ -0.01
DNMT1-218ENST00000589294 ANKRD45Q5TZF3 282 aa14.98□□□□□ -0.01
DNMT1-218ENST00000589294 FPGT-TNNI3KV9GXZ4 949 aa14.98□□□□□ -0.01
DNMT1-218ENST00000589294 A0A1B0GUL7 405 aa14.97□□□□□ -0.01
DNMT1-218ENST00000589294 SNAP23O00161 211 aa14.97□□□□□ -0.01
DNMT1-218ENST00000589294 NUCB1Q02818 461 aa14.97□□□□□ -0.01
DNMT1-218ENST00000589294 EAF2Q96CJ1 260 aaPredicted RBP14.97□□□□□ -0.01
DNMT1-218ENST00000589294 NEUROD6Q96NK8 337 aa14.97□□□□□ -0.01
DNMT1-218ENST00000589294 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.97□□□□□ -0.01
DNMT1-218ENST00000589294 CACNA1SQ13698 1873 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms