RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 KSR2Q6VAB6 950 aa27.52■■■□□ 2
NEDD4L-225ENST00000589054 CTCFP49711 727 aaPredicted RBP27.51■■□□□ 1.99
NEDD4L-225ENST00000589054 LBX1P52954 281 aa27.51■■□□□ 1.99
NEDD4L-225ENST00000589054 DPF2Q92785 391 aa27.51■■□□□ 1.99
NEDD4L-225ENST00000589054 PRDM10Q9NQV6 1147 aa27.51■■□□□ 1.99
NEDD4L-225ENST00000589054 HSPA8P11142 646 aaKnown RBP27.5■■□□□ 1.99
NEDD4L-225ENST00000589054 GRM1Q13255 1194 aa27.5■■□□□ 1.99
NEDD4L-225ENST00000589054 CWF19L2Q2TBE0 894 aaKnown RBP27.5■■□□□ 1.99
NEDD4L-225ENST00000589054 ZC3H15Q8WU90 426 aaKnown RBP27.5■■□□□ 1.99
NEDD4L-225ENST00000589054 H7C1D1 291 aa27.49■■□□□ 1.99
NEDD4L-225ENST00000589054 DDX58O95786 925 aaKnown RBP27.49■■□□□ 1.99
NEDD4L-225ENST00000589054 CCDC152Q4G0S7 254 aa27.49■■□□□ 1.99
NEDD4L-225ENST00000589054 TBC1D10BQ4KMP7 808 aaPredicted RBP27.49■■□□□ 1.99
NEDD4L-225ENST00000589054 SAPCD2Q86UD0 394 aa27.49■■□□□ 1.99
NEDD4L-225ENST00000589054 USP48Q86UV5 1035 aa27.49■■□□□ 1.99
NEDD4L-225ENST00000589054 AIDAQ96BJ3 306 aa27.49■■□□□ 1.99
NEDD4L-225ENST00000589054 AOC2O75106 756 aa27.48■■□□□ 1.99
NEDD4L-225ENST00000589054 UFL1O94874 794 aa27.48■■□□□ 1.99
NEDD4L-225ENST00000589054 TWISTNBQ3B726 338 aaPredicted RBP27.48■■□□□ 1.99
NEDD4L-225ENST00000589054 PAXIP1Q6ZW49 1069 aaPredicted RBP27.48■■□□□ 1.99
NEDD4L-225ENST00000589054 EYA3Q99504 573 aa27.48■■□□□ 1.99
NEDD4L-225ENST00000589054 SCN9AQ15858 1988 aa27.46■■□□□ 1.99
NEDD4L-225ENST00000589054 SLC4A2P04920 1241 aa27.46■■□□□ 1.99
NEDD4L-225ENST00000589054 VIL1P09327 827 aaKnown RBP27.46■■□□□ 1.99
NEDD4L-225ENST00000589054 CDC37L1Q7L3B6 337 aa27.46■■□□□ 1.99
NEDD4L-225ENST00000589054 TTLL11Q8NHH1 800 aa27.46■■□□□ 1.99
NEDD4L-225ENST00000589054 ZC3H12CQ9C0D7 883 aaKnown RBP27.46■■□□□ 1.99
NEDD4L-225ENST00000589054 ZNF408Q9H9D4 720 aa27.46■■□□□ 1.99
NEDD4L-225ENST00000589054 ANKIB1Q9P2G1 1089 aa27.46■■□□□ 1.99
NEDD4L-225ENST00000589054 GGA1Q9UJY5 639 aa27.46■■□□□ 1.99
NEDD4L-225ENST00000589054 TRPM7Q96QT4 1865 aa27.46■■□□□ 1.99
NEDD4L-225ENST00000589054 NEURL1BA8MQ27 555 aa27.45■■□□□ 1.98
NEDD4L-225ENST00000589054 CTSWP56202 376 aa27.45■■□□□ 1.98
NEDD4L-225ENST00000589054 RBM26Q5T8P6 1007 aaKnown RBP27.45■■□□□ 1.98
NEDD4L-225ENST00000589054 ASTN2O75129 1339 aaPredicted RBP27.44■■□□□ 1.98
NEDD4L-225ENST00000589054 MAP2K1Q02750 393 aaPredicted RBP27.44■■□□□ 1.98
NEDD4L-225ENST00000589054 GREM2Q9H772 168 aa27.44■■□□□ 1.98
NEDD4L-225ENST00000589054 SALL2Q9Y467 1007 aaPredicted RBP27.44■■□□□ 1.98
NEDD4L-225ENST00000589054 THSD7BQ9C0I4 1608 aa27.43■■□□□ 1.98
NEDD4L-225ENST00000589054 H7C1W4 665 aa27.43■■□□□ 1.98
NEDD4L-225ENST00000589054 HSP90B1P14625 803 aaKnown RBP27.43■■□□□ 1.98
NEDD4L-225ENST00000589054 ANKRD18AQ8IVF6 992 aa27.43■■□□□ 1.98
NEDD4L-225ENST00000589054 MRS2Q9HD23 443 aa27.43■■□□□ 1.98
NEDD4L-225ENST00000589054 IL16Q14005 1332 aa27.42■■□□□ 1.98
NEDD4L-225ENST00000589054 RPS12P25398 132 aaKnown RBP27.42■■□□□ 1.98
NEDD4L-225ENST00000589054 ECE1P42892 770 aa27.42■■□□□ 1.98
NEDD4L-225ENST00000589054 ZIC5Q96T25 663 aa27.42■■□□□ 1.98
NEDD4L-225ENST00000589054 STK31Q9BXU1 1019 aa27.42■■□□□ 1.98
NEDD4L-225ENST00000589054 SPINK5Q9NQ38 1064 aaPredicted RBP27.42■■□□□ 1.98
NEDD4L-225ENST00000589054 FANCIQ9NVI1 1328 aa27.41■■□□□ 1.98
NEDD4L-225ENST00000589054 ADM5C9JUS6 153 aa27.41■■□□□ 1.98
NEDD4L-225ENST00000589054 CASP7P55210 303 aa27.4■■□□□ 1.98
NEDD4L-225ENST00000589054 CHMP4AQ9BY43 222 aa27.4■■□□□ 1.98
NEDD4L-225ENST00000589054 TSKSQ9UJT2 592 aa27.4■■□□□ 1.98
NEDD4L-225ENST00000589054 MINPP1Q9UNW1 487 aa27.4■■□□□ 1.98
NEDD4L-225ENST00000589054 XDHP47989 1333 aa27.4■■□□□ 1.98
NEDD4L-225ENST00000589054 VAMP4O75379 141 aa27.39■■□□□ 1.98
NEDD4L-225ENST00000589054 FLIIQ13045 1269 aa27.39■■□□□ 1.98
NEDD4L-225ENST00000589054 NCBP3Q53F19 620 aaKnown RBP27.39■■□□□ 1.98
NEDD4L-225ENST00000589054 UBE3BQ7Z3V4 1068 aa27.39■■□□□ 1.98
NEDD4L-225ENST00000589054 GMLQ99445 158 aa27.39■■□□□ 1.98
NEDD4L-225ENST00000589054 KIF4BQ2VIQ3 1234 aa27.38■■□□□ 1.97
NEDD4L-225ENST00000589054 KRT26Q7Z3Y9 468 aa27.38■■□□□ 1.97
NEDD4L-225ENST00000589054 BSDC1Q9NW68 430 aaPredicted RBP27.38■■□□□ 1.97
NEDD4L-225ENST00000589054 ATP2B4P23634 1241 aa27.37■■□□□ 1.97
NEDD4L-225ENST00000589054 MAP2K2P36507 400 aa27.37■■□□□ 1.97
NEDD4L-225ENST00000589054 NEXNQ0ZGT2 675 aa27.37■■□□□ 1.97
NEDD4L-225ENST00000589054 GCKRQ14397 625 aa27.37■■□□□ 1.97
NEDD4L-225ENST00000589054 RSBN1LQ6PCB5 846 aaPredicted RBP27.37■■□□□ 1.97
NEDD4L-225ENST00000589054 HHIPL1Q96JK4 782 aa27.37■■□□□ 1.97
NEDD4L-225ENST00000589054 ZNF280AP59817 542 aaPredicted RBP27.36■■□□□ 1.97
NEDD4L-225ENST00000589054 EXOSC9Q06265 439 aaKnown RBP27.36■■□□□ 1.97
NEDD4L-225ENST00000589054 TXNRD3Q86VQ6 643 aa27.36■■□□□ 1.97
NEDD4L-225ENST00000589054 CDC5LQ99459 802 aaKnown RBP27.36■■□□□ 1.97
NEDD4L-225ENST00000589054 MXD3Q9BW11 206 aa27.36■■□□□ 1.97
NEDD4L-225ENST00000589054 ZNF316A6NFI3 1004 aaPredicted RBP27.35■■□□□ 1.97
NEDD4L-225ENST00000589054 G3V3G9 751 aa27.34■■□□□ 1.97
NEDD4L-225ENST00000589054 DCAF8Q5TAQ9 597 aa27.34■■□□□ 1.97
NEDD4L-225ENST00000589054 DNAAF4Q8WXU2 420 aa27.34■■□□□ 1.97
NEDD4L-225ENST00000589054 PLA2G12BQ9BX93 195 aa27.34■■□□□ 1.97
NEDD4L-225ENST00000589054 GGA3Q9NZ52 723 aa27.34■■□□□ 1.97
NEDD4L-225ENST00000589054 KLRK1P26718 216 aa27.33■■□□□ 1.97
NEDD4L-225ENST00000589054 HUNKP57058 714 aa27.33■■□□□ 1.97
NEDD4L-225ENST00000589054 WDR63Q8IWG1 891 aa27.33■■□□□ 1.97
NEDD4L-225ENST00000589054 AGBL3Q8NEM8 1001 aa27.33■■□□□ 1.97
NEDD4L-225ENST00000589054 DCPSQ96C86 337 aaKnown RBP27.33■■□□□ 1.97
NEDD4L-225ENST00000589054 POLR2AP24928 1970 aaKnown RBP27.33■■□□□ 1.97
NEDD4L-225ENST00000589054 ANP32CO43423 234 aa27.32■■□□□ 1.96
NEDD4L-225ENST00000589054 CSF1RP07333 972 aa27.32■■□□□ 1.96
NEDD4L-225ENST00000589054 CCT4P50991 539 aaKnown RBP27.32■■□□□ 1.96
NEDD4L-225ENST00000589054 FKBP5Q13451 457 aaPredicted RBP27.32■■□□□ 1.96
NEDD4L-225ENST00000589054 SCARF1Q14162 830 aa27.32■■□□□ 1.96
NEDD4L-225ENST00000589054 FAM161AQ3B820 660 aa27.32■■□□□ 1.96
NEDD4L-225ENST00000589054 SCAF8Q9UPN6 1271 aaKnown RBP27.32■■□□□ 1.96
NEDD4L-225ENST00000589054 ZNF609O15014 1411 aa27.32■■□□□ 1.96
NEDD4L-225ENST00000589054 FAM155AB1AL88 458 aaPredicted RBP27.31■■□□□ 1.96
NEDD4L-225ENST00000589054 F6X3S4 739 aa27.31■■□□□ 1.96
NEDD4L-225ENST00000589054 USP17L3A6NCW0 530 aa27.3■■□□□ 1.96
NEDD4L-225ENST00000589054 USP17L4A6NCW7 530 aa27.3■■□□□ 1.96
NEDD4L-225ENST00000589054 ITGA6P23229 1130 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms