RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 TBC1D16Q8TBP0 767 aa14.71□□□□□ -0.05
RFX1-204ENST00000588885 CDCA7LQ96GN5 454 aa14.71□□□□□ -0.05
RFX1-204ENST00000588885 GREM2Q9H772 168 aa14.71□□□□□ -0.05
RFX1-204ENST00000588885 DBNDD1Q9H9R9 158 aa14.71□□□□□ -0.05
RFX1-204ENST00000588885 COL4A1P02462 1669 aa14.71□□□□□ -0.06
RFX1-204ENST00000588885 PCNTO95613 3336 aa14.71□□□□□ -0.06
RFX1-204ENST00000588885 TAF1P21675 1872 aa14.7□□□□□ -0.06
RFX1-204ENST00000588885 YDJCA8MPS7 323 aa14.7□□□□□ -0.06
RFX1-204ENST00000588885 GMPSP49915 693 aaPredicted RBP14.7□□□□□ -0.06
RFX1-204ENST00000588885 MAP1SQ66K74 1059 aaPredicted RBP14.7□□□□□ -0.06
RFX1-204ENST00000588885 CIAPIN1Q6FI81 312 aa14.7□□□□□ -0.06
RFX1-204ENST00000588885 LINS1Q8NG48 757 aa14.7□□□□□ -0.06
RFX1-204ENST00000588885 ZBED9Q6R2W3 1325 aa14.69□□□□□ -0.06
RFX1-204ENST00000588885 UFL1O94874 794 aa14.69□□□□□ -0.06
RFX1-204ENST00000588885 SLC4A10Q6U841 1118 aa14.69□□□□□ -0.06
RFX1-204ENST00000588885 PNMA8AQ86V59 439 aaPredicted RBP14.69□□□□□ -0.06
RFX1-204ENST00000588885 BCL2L13Q9BXK5 485 aa14.69□□□□□ -0.06
RFX1-204ENST00000588885 KCNQ5Q9NR82 932 aa14.69□□□□□ -0.06
RFX1-204ENST00000588885 WTIPA6NIX2 430 aaPredicted RBP14.68□□□□□ -0.06
RFX1-204ENST00000588885 E9PSI1 815 aa14.68□□□□□ -0.06
RFX1-204ENST00000588885 CASP7P55210 303 aa14.68□□□□□ -0.06
RFX1-204ENST00000588885 TNIP1Q15025 636 aa14.68□□□□□ -0.06
RFX1-204ENST00000588885 BEND3Q5T5X7 828 aa14.68□□□□□ -0.06
RFX1-204ENST00000588885 CNTROBQ8N137 903 aa14.68□□□□□ -0.06
RFX1-204ENST00000588885 JMYQ8N9B5 988 aa14.68□□□□□ -0.06
RFX1-204ENST00000588885 CDC5LQ99459 802 aaKnown RBP14.68□□□□□ -0.06
RFX1-204ENST00000588885 EYA3Q99504 573 aa14.68□□□□□ -0.06
RFX1-204ENST00000588885 ZC3H12CQ9C0D7 883 aaKnown RBP14.68□□□□□ -0.06
RFX1-204ENST00000588885 GGA1Q9UJY5 639 aa14.68□□□□□ -0.06
RFX1-204ENST00000588885 DDX60Q8IY21 1712 aaKnown RBP14.68□□□□□ -0.06
RFX1-204ENST00000588885 SHTN1A0MZ66 631 aa14.67□□□□□ -0.06
RFX1-204ENST00000588885 G3V3G9 751 aa14.67□□□□□ -0.06
RFX1-204ENST00000588885 ECE2O60344 883 aa14.67□□□□□ -0.06
RFX1-204ENST00000588885 SLFN5Q08AF3 891 aa14.67□□□□□ -0.06
RFX1-204ENST00000588885 DCAF8Q5TAQ9 597 aa14.67□□□□□ -0.06
RFX1-204ENST00000588885 CREBZFQ9NS37 354 aa14.67□□□□□ -0.06
RFX1-204ENST00000588885 GPRC5DQ9NZD1 345 aa14.67□□□□□ -0.06
RFX1-204ENST00000588885 MKRN1Q9UHC7 482 aaKnown RBP14.67□□□□□ -0.06
RFX1-204ENST00000588885 ZBTB12Q9Y330 459 aaPredicted RBP14.67□□□□□ -0.06
RFX1-204ENST00000588885 TRPM7Q96QT4 1865 aa14.67□□□□□ -0.06
RFX1-204ENST00000588885 PSMD14O00487 310 aa14.66□□□□□ -0.06
RFX1-204ENST00000588885 ITGBL1O95965 494 aaPredicted RBP14.66□□□□□ -0.06
RFX1-204ENST00000588885 FAM161AQ3B820 660 aa14.66□□□□□ -0.06
RFX1-204ENST00000588885 REM2Q8IYK8 340 aaPredicted RBP14.66□□□□□ -0.06
RFX1-204ENST00000588885 MRPL50Q8N5N7 158 aaKnown RBP14.66□□□□□ -0.06
RFX1-204ENST00000588885 PODXL2Q9NZ53 605 aa14.66□□□□□ -0.06
RFX1-204ENST00000588885 MINPP1Q9UNW1 487 aa14.66□□□□□ -0.06
RFX1-204ENST00000588885 CHMP3Q9Y3E7 222 aa14.66□□□□□ -0.06
RFX1-204ENST00000588885 HSPA1AP0DMV8 641 aaKnown RBP14.65□□□□□ -0.06
RFX1-204ENST00000588885 HSPA1BP0DMV9 641 aaKnown RBP14.65□□□□□ -0.06
RFX1-204ENST00000588885 ITGA6P23229 1130 aa14.65□□□□□ -0.06
RFX1-204ENST00000588885 FMR1Q06787 632 aaKnown RBP eCLIP14.65□□□□□ -0.06
RFX1-204ENST00000588885 PLA2G12BQ9BX93 195 aa14.65□□□□□ -0.06
RFX1-204ENST00000588885 BSDC1Q9NW68 430 aaPredicted RBP14.65□□□□□ -0.06
RFX1-204ENST00000588885 CNOT7Q9UIV1 285 aaKnown RBP14.65□□□□□ -0.06
RFX1-204ENST00000588885 CSF1RP07333 972 aa14.64□□□□□ -0.07
RFX1-204ENST00000588885 ATP2B4P23634 1241 aa14.64□□□□□ -0.07
RFX1-204ENST00000588885 IGHMBP2P38935 993 aaKnown RBP14.64□□□□□ -0.07
RFX1-204ENST00000588885 USP50Q70EL3 339 aaPredicted RBP14.64□□□□□ -0.07
RFX1-204ENST00000588885 SSH1Q8WYL5 1049 aa14.64□□□□□ -0.07
RFX1-204ENST00000588885 ADARB2Q9NS39 739 aaKnown RBP14.64□□□□□ -0.07
RFX1-204ENST00000588885 C9orf78Q9NZ63 289 aaPredicted RBP14.64□□□□□ -0.07
RFX1-204ENST00000588885 DUOX1Q9NRD9 1551 aa14.64□□□□□ -0.07
RFX1-204ENST00000588885 XDHP47989 1333 aa14.64□□□□□ -0.07
RFX1-204ENST00000588885 PASKQ96RG2 1323 aa14.64□□□□□ -0.07
RFX1-204ENST00000588885 FOXO4P98177 505 aa14.63□□□□□ -0.07
RFX1-204ENST00000588885 EPHA10Q5JZY3 1008 aa14.63□□□□□ -0.07
RFX1-204ENST00000588885 RBM26Q5T8P6 1007 aaKnown RBP14.63□□□□□ -0.07
RFX1-204ENST00000588885 MICALL2Q8IY33 904 aa14.63□□□□□ -0.07
RFX1-204ENST00000588885 TRPM4Q8TD43 1214 aa14.63□□□□□ -0.07
RFX1-204ENST00000588885 MPHOSPH8Q99549 860 aa14.63□□□□□ -0.07
RFX1-204ENST00000588885 SRCIN1Q9C0H9 1055 aa14.63□□□□□ -0.07
RFX1-204ENST00000588885 ANKRD18BA2A2Z9 1011 aa14.62□□□□□ -0.07
RFX1-204ENST00000588885 TMEM88BA6NKF7 163 aa14.62□□□□□ -0.07
RFX1-204ENST00000588885 H7C1D1 291 aa14.62□□□□□ -0.07
RFX1-204ENST00000588885 GRM8O00222 908 aa14.62□□□□□ -0.07
RFX1-204ENST00000588885 TRAF5O00463 557 aa14.62□□□□□ -0.07
RFX1-204ENST00000588885 HIRAP54198 1017 aaPredicted RBP14.62□□□□□ -0.07
RFX1-204ENST00000588885 LMBR1LQ6UX01 489 aa14.62□□□□□ -0.07
RFX1-204ENST00000588885 SAMD7Q7Z3H4 446 aa14.62□□□□□ -0.07
RFX1-204ENST00000588885 TNS4Q8IZW8 715 aa14.62□□□□□ -0.07
RFX1-204ENST00000588885 ADAMTSL1Q8N6G6 1762 aa14.62□□□□□ -0.07
RFX1-204ENST00000588885 RTL9Q8NET4 1388 aa14.61□□□□□ -0.07
RFX1-204ENST00000588885 ALDH1L1O75891 902 aa14.61□□□□□ -0.07
RFX1-204ENST00000588885 CCT4P50991 539 aaKnown RBP14.61□□□□□ -0.07
RFX1-204ENST00000588885 IFIT5Q13325 482 aaKnown RBP14.61□□□□□ -0.07
RFX1-204ENST00000588885 TBC1D10BQ4KMP7 808 aaPredicted RBP14.61□□□□□ -0.07
RFX1-204ENST00000588885 COL13A1Q5TAT6 717 aaPredicted RBP14.61□□□□□ -0.07
RFX1-204ENST00000588885 PAXIP1Q6ZW49 1069 aaPredicted RBP14.61□□□□□ -0.07
RFX1-204ENST00000588885 HELBQ8NG08 1087 aaPredicted RBP14.61□□□□□ -0.07
RFX1-204ENST00000588885 AIDAQ96BJ3 306 aa14.61□□□□□ -0.07
RFX1-204ENST00000588885 ZNF594Q96JF6 807 aaPredicted RBP14.61□□□□□ -0.07
RFX1-204ENST00000588885 ABT1Q9ULW3 272 aaKnown RBP14.61□□□□□ -0.07
RFX1-204ENST00000588885 LTBP1Q14766 1721 aa14.61□□□□□ -0.07
RFX1-204ENST00000588885 SNAP23O00161 211 aa14.6□□□□□ -0.07
RFX1-204ENST00000588885 TRMT2AQ8IZ69 625 aaKnown RBP14.6□□□□□ -0.07
RFX1-204ENST00000588885 FBXW7Q969H0 707 aa14.6□□□□□ -0.07
RFX1-204ENST00000588885 GLIS2Q9BZE0 524 aaPredicted RBP14.6□□□□□ -0.07
RFX1-204ENST00000588885 SMC4Q9NTJ3 1288 aa14.6□□□□□ -0.07
RFX1-204ENST00000588885 TAF5LO75529 589 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms