RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 WWC3Q9ULE0 1092 aa11.26□□□□□ -0.61
CIRBP-218ENST00000588344 RIPOR2Q9Y4F9 1068 aa11.26□□□□□ -0.61
CIRBP-218ENST00000588344 XDHP47989 1333 aa11.26□□□□□ -0.61
CIRBP-218ENST00000588344 GOLGB1Q14789 3259 aaKnown RBP11.25□□□□□ -0.61
CIRBP-218ENST00000588344 LMNB1P20700 586 aa11.25□□□□□ -0.61
CIRBP-218ENST00000588344 CHRNDQ07001 517 aa11.25□□□□□ -0.61
CIRBP-218ENST00000588344 G3BP1Q13283 466 aaKnown RBP eCLIP11.25□□□□□ -0.61
CIRBP-218ENST00000588344 ZNF594Q96JF6 807 aaPredicted RBP11.25□□□□□ -0.61
CIRBP-218ENST00000588344 NOP58Q9Y2X3 529 aaKnown RBP11.25□□□□□ -0.61
CIRBP-218ENST00000588344 ANKRD31Q8N7Z5 1873 aa11.24□□□□□ -0.61
CIRBP-218ENST00000588344 PNMA6EA0A0J9YXQ4 647 aa11.24□□□□□ -0.61
CIRBP-218ENST00000588344 C6orf229H3BNL8 230 aa11.24□□□□□ -0.61
CIRBP-218ENST00000588344 PDE8BO95263 885 aa11.24□□□□□ -0.61
CIRBP-218ENST00000588344 GPSM2P81274 684 aa11.24□□□□□ -0.61
CIRBP-218ENST00000588344 UBE4AQ14139 1066 aa11.24□□□□□ -0.61
CIRBP-218ENST00000588344 WASHC4Q2M389 1173 aa11.24□□□□□ -0.61
CIRBP-218ENST00000588344 METTL24Q5JXM2 366 aa11.24□□□□□ -0.61
CIRBP-218ENST00000588344 ERC1Q8IUD2 1116 aa11.24□□□□□ -0.61
CIRBP-218ENST00000588344 TBC1D16Q8TBP0 767 aa11.24□□□□□ -0.61
CIRBP-218ENST00000588344 ZC3H12CQ9C0D7 883 aaKnown RBP11.24□□□□□ -0.61
CIRBP-218ENST00000588344 C1orf115Q9H7X2 142 aa11.24□□□□□ -0.61
CIRBP-218ENST00000588344 CEP126Q9P2H0 1117 aa11.24□□□□□ -0.61
CIRBP-218ENST00000588344 TNRC6CQ9HCJ0 1690 aaKnown RBP11.24□□□□□ -0.61
CIRBP-218ENST00000588344 NFKBIEO00221 500 aa11.23□□□□□ -0.61
CIRBP-218ENST00000588344 SURF6O75683 361 aaKnown RBP11.23□□□□□ -0.61
CIRBP-218ENST00000588344 UFL1O94874 794 aa11.23□□□□□ -0.61
CIRBP-218ENST00000588344 KCNJ4P48050 445 aa11.23□□□□□ -0.61
CIRBP-218ENST00000588344 LRRC24Q50LG9 513 aa11.23□□□□□ -0.61
CIRBP-218ENST00000588344 JDP2Q8WYK2 163 aa11.23□□□□□ -0.61
CIRBP-218ENST00000588344 AKAP2Q9Y2D5 859 aa11.23□□□□□ -0.61
CIRBP-218ENST00000588344 ZNF804BA4D1E1 1349 aa11.23□□□□□ -0.61
CIRBP-218ENST00000588344 ZC3H4Q9UPT8 1303 aaKnown RBP11.23□□□□□ -0.61
CIRBP-218ENST00000588344 DDX60Q8IY21 1712 aaKnown RBP11.23□□□□□ -0.61
CIRBP-218ENST00000588344 G3V3G9 751 aa11.22□□□□□ -0.61
CIRBP-218ENST00000588344 RAB11FIP3O75154 756 aa11.22□□□□□ -0.61
CIRBP-218ENST00000588344 NEFLP07196 543 aa11.22□□□□□ -0.61
CIRBP-218ENST00000588344 IARSP41252 1262 aaKnown RBP11.22□□□□□ -0.61
CIRBP-218ENST00000588344 LAMB2P55268 1798 aa11.22□□□□□ -0.61
CIRBP-218ENST00000588344 KIAA2012Q0VF49 1180 aa11.22□□□□□ -0.61
CIRBP-218ENST00000588344 DCAF8Q5TAQ9 597 aa11.22□□□□□ -0.61
CIRBP-218ENST00000588344 OLFM4Q6UX06 510 aa11.22□□□□□ -0.61
CIRBP-218ENST00000588344 C15orf52Q6ZUT6 534 aaKnown RBP11.22□□□□□ -0.61
CIRBP-218ENST00000588344 ATG9AQ7Z3C6 839 aa11.22□□□□□ -0.61
CIRBP-218ENST00000588344 KLHDC4Q8TBB5 520 aa11.22□□□□□ -0.61
CIRBP-218ENST00000588344 PUS3Q9BZE2 481 aaKnown RBP11.22□□□□□ -0.61
CIRBP-218ENST00000588344 KIAA1551Q9HCM1 1747 aa11.22□□□□□ -0.61
CIRBP-218ENST00000588344 POLLQ9UGP5 575 aa11.22□□□□□ -0.61
CIRBP-218ENST00000588344 N4BP2Q86UW6 1770 aaPredicted RBP11.21□□□□□ -0.61
CIRBP-218ENST00000588344 PPIP5K2O43314 1243 aa11.21□□□□□ -0.61
CIRBP-218ENST00000588344 IFIT1P09914 478 aaKnown RBP11.21□□□□□ -0.61
CIRBP-218ENST00000588344 OS9Q13438 667 aaPredicted RBP11.21□□□□□ -0.61
CIRBP-218ENST00000588344 PUM3Q15397 648 aaKnown RBP11.21□□□□□ -0.61
CIRBP-218ENST00000588344 SIRT2Q8IXJ6 389 aa11.21□□□□□ -0.61
CIRBP-218ENST00000588344 LARGE2Q8N3Y3 721 aa11.21□□□□□ -0.61
CIRBP-218ENST00000588344 EXOC6Q8TAG9 804 aa11.21□□□□□ -0.61
CIRBP-218ENST00000588344 LPIN2Q92539 896 aa11.21□□□□□ -0.61
CIRBP-218ENST00000588344 SIL1Q9H173 461 aa11.21□□□□□ -0.61
CIRBP-218ENST00000588344 RWDD1Q9H446 243 aaPredicted RBP11.21□□□□□ -0.61
CIRBP-218ENST00000588344 GPR108Q9NPR9 543 aa11.21□□□□□ -0.61
CIRBP-218ENST00000588344 ZNF277Q9NRM2 450 aaPredicted RBP11.21□□□□□ -0.61
CIRBP-218ENST00000588344 PA2G4Q9UQ80 394 aaKnown RBP11.21□□□□□ -0.61
CIRBP-218ENST00000588344 DLEC1Q9Y238 1755 aa11.21□□□□□ -0.62
CIRBP-218ENST00000588344 SNED1Q8TER0 1413 aa11.2□□□□□ -0.62
CIRBP-218ENST00000588344 UTRNP46939 3433 aa11.2□□□□□ -0.62
CIRBP-218ENST00000588344 HDAC1Q13547 482 aaPredicted RBP11.2□□□□□ -0.62
CIRBP-218ENST00000588344 CAVIN4Q5BKX8 364 aa11.2□□□□□ -0.62
CIRBP-218ENST00000588344 C9orf131Q5VYM1 1079 aa11.2□□□□□ -0.62
CIRBP-218ENST00000588344 PODNQ7Z5L7 613 aa11.2□□□□□ -0.62
CIRBP-218ENST00000588344 VGLL2Q8N8G2 317 aa11.2□□□□□ -0.62
CIRBP-218ENST00000588344 KIF1BPQ96EK5 621 aa11.2□□□□□ -0.62
CIRBP-218ENST00000588344 COA1Q9GZY4 146 aa11.2□□□□□ -0.62
CIRBP-218ENST00000588344 RNF181Q9P0P0 153 aa11.2□□□□□ -0.62
CIRBP-218ENST00000588344 PCDHB15Q9Y5E8 787 aa11.2□□□□□ -0.62
CIRBP-218ENST00000588344 COL11A2P13942 1736 aaPredicted RBP11.2□□□□□ -0.62
CIRBP-218ENST00000588344 MED23Q9ULK4 1368 aa11.19□□□□□ -0.62
CIRBP-218ENST00000588344 TAF5LO75529 589 aa11.19□□□□□ -0.62
CIRBP-218ENST00000588344 SLC5A1P13866 664 aa11.19□□□□□ -0.62
CIRBP-218ENST00000588344 RASSF7Q02833 373 aa11.19□□□□□ -0.62
CIRBP-218ENST00000588344 ERICH6BQ5W0A0 696 aa11.19□□□□□ -0.62
CIRBP-218ENST00000588344 DPY19L2Q6NUT2 758 aa11.19□□□□□ -0.62
CIRBP-218ENST00000588344 NIM1KQ8IY84 436 aa11.19□□□□□ -0.62
CIRBP-218ENST00000588344 HELBQ8NG08 1087 aaPredicted RBP11.19□□□□□ -0.62
CIRBP-218ENST00000588344 GCC1Q96CN9 775 aa11.19□□□□□ -0.62
CIRBP-218ENST00000588344 DCTPP1Q9H773 170 aa11.19□□□□□ -0.62
CIRBP-218ENST00000588344 ZNRF3Q9ULT6 936 aa11.19□□□□□ -0.62
CIRBP-218ENST00000588344 SLX4Q8IY92 1834 aa11.19□□□□□ -0.62
CIRBP-218ENST00000588344 FZD9O00144 591 aa11.18□□□□□ -0.62
CIRBP-218ENST00000588344 ZBTB22O15209 634 aa11.18□□□□□ -0.62
CIRBP-218ENST00000588344 FGFR2P21802 821 aa11.18□□□□□ -0.62
CIRBP-218ENST00000588344 EIF6P56537 245 aaKnown RBP11.18□□□□□ -0.62
CIRBP-218ENST00000588344 TFCP2Q12800 502 aa11.18□□□□□ -0.62
CIRBP-218ENST00000588344 TNIP1Q15025 636 aa11.18□□□□□ -0.62
CIRBP-218ENST00000588344 AOC3Q16853 763 aa11.18□□□□□ -0.62
CIRBP-218ENST00000588344 ZNF804AQ7Z570 1209 aa11.18□□□□□ -0.62
CIRBP-218ENST00000588344 VPS37DQ86XT2 251 aa11.18□□□□□ -0.62
CIRBP-218ENST00000588344 RIMBP2O15034 1052 aa11.17□□□□□ -0.62
CIRBP-218ENST00000588344 SASH1O94885 1247 aa11.17□□□□□ -0.62
CIRBP-218ENST00000588344 HIBADHP31937 336 aaKnown RBP11.17□□□□□ -0.62
CIRBP-218ENST00000588344 ATP2B3Q16720 1220 aa11.17□□□□□ -0.62
CIRBP-218ENST00000588344 CLASRPQ8N2M8 674 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms