RNA–Protein interactions for RNA: ENST00000588278.1

TPGS1-202, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

Gene TPGS1, Length 2,873 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-202ENST00000588278 PPFIA3O75145 1194 aa18.3■□□□□ 0.52
TPGS1-202ENST00000588278 ZKSCAN1P17029 563 aaPredicted RBP18.3■□□□□ 0.52
TPGS1-202ENST00000588278 TATP17735 454 aaPredicted RBP18.3■□□□□ 0.52
TPGS1-202ENST00000588278 CYP46A1Q9Y6A2 500 aa18.3■□□□□ 0.52
TPGS1-202ENST00000588278 TTC41PQ6P2S7 1318 aa18.29■□□□□ 0.52
TPGS1-202ENST00000588278 POLR3GO15318 223 aaPredicted RBP18.29■□□□□ 0.52
TPGS1-202ENST00000588278 ADGRL3Q9HAR2 1447 aa18.29■□□□□ 0.52
TPGS1-202ENST00000588278 PXDNLA1KZ92 1463 aa18.29■□□□□ 0.52
TPGS1-202ENST00000588278 A0A0D9SFI3 127 aa18.29■□□□□ 0.52
TPGS1-202ENST00000588278 ERC1Q8IUD2 1116 aa18.29■□□□□ 0.52
TPGS1-202ENST00000588278 TAF6LQ9Y6J9 622 aa18.29■□□□□ 0.52
TPGS1-202ENST00000588278 LRRC37A3O60309 1634 aa18.29■□□□□ 0.52
TPGS1-202ENST00000588278 HNRNPH2P55795 449 aaKnown RBP18.28■□□□□ 0.52
TPGS1-202ENST00000588278 PDIA6Q15084 440 aa18.28■□□□□ 0.52
TPGS1-202ENST00000588278 LARP1Q6PKG0 1096 aaKnown RBP18.28■□□□□ 0.52
TPGS1-202ENST00000588278 EVI5LQ96CN4 794 aa18.28■□□□□ 0.52
TPGS1-202ENST00000588278 ATF3P18847 181 aa18.28■□□□□ 0.52
TPGS1-202ENST00000588278 NEK11Q8NG66 645 aa18.28■□□□□ 0.52
TPGS1-202ENST00000588278 ZFP91Q96JP5 570 aaPredicted RBP18.28■□□□□ 0.52
TPGS1-202ENST00000588278 PGBD1Q96JS3 809 aa18.28■□□□□ 0.52
TPGS1-202ENST00000588278 CCDC69A6NI79 296 aa18.28■□□□□ 0.52
TPGS1-202ENST00000588278 NOL10Q9BSC4 688 aaKnown RBP18.28■□□□□ 0.52
TPGS1-202ENST00000588278 NFAT5O94916 1531 aa18.28■□□□□ 0.52
TPGS1-202ENST00000588278 ANKRD13DQ6ZTN6 518 aa18.27■□□□□ 0.52
TPGS1-202ENST00000588278 SLC52A2Q9HAB3 445 aa18.27■□□□□ 0.52
TPGS1-202ENST00000588278 MARF1Q9Y4F3 1742 aaKnown RBP18.27■□□□□ 0.51
TPGS1-202ENST00000588278 TDRD7Q8NHU6 1098 aaKnown RBP18.27■□□□□ 0.51
TPGS1-202ENST00000588278 FTOQ9C0B1 505 aaKnown RBP eCLIP18.27■□□□□ 0.51
TPGS1-202ENST00000588278 NEURL1BA8MQ27 555 aa18.26■□□□□ 0.51
TPGS1-202ENST00000588278 CREB3L3Q68CJ9 461 aa18.26■□□□□ 0.51
TPGS1-202ENST00000588278 LEO1Q8WVC0 666 aaPredicted RBP18.26■□□□□ 0.51
TPGS1-202ENST00000588278 IL17RAQ96F46 866 aa18.26■□□□□ 0.51
TPGS1-202ENST00000588278 CCDC171Q6TFL3 1326 aa18.26■□□□□ 0.51
TPGS1-202ENST00000588278 NPHP3Q7Z494 1330 aa18.26■□□□□ 0.51
TPGS1-202ENST00000588278 GOLGA6L19H0YKK7 550 aa18.26■□□□□ 0.51
TPGS1-202ENST00000588278 MTX1Q13505 466 aa18.26■□□□□ 0.51
TPGS1-202ENST00000588278 HSPA2P54652 639 aa18.25■□□□□ 0.51
TPGS1-202ENST00000588278 GCKRQ14397 625 aa18.25■□□□□ 0.51
TPGS1-202ENST00000588278 CCDC129Q6ZRS4 1044 aa18.25■□□□□ 0.51
TPGS1-202ENST00000588278 NYAP1Q6ZVC0 841 aa18.25■□□□□ 0.51
TPGS1-202ENST00000588278 ZNF589Q86UQ0 364 aaPredicted RBP18.25■□□□□ 0.51
TPGS1-202ENST00000588278 CLSTN2Q9H4D0 955 aa18.25■□□□□ 0.51
TPGS1-202ENST00000588278 A0A087WZG4 1122 aa18.25■□□□□ 0.51
TPGS1-202ENST00000588278 TFCP2Q12800 502 aa18.25■□□□□ 0.51
TPGS1-202ENST00000588278 NEUROD6Q96NK8 337 aa18.25■□□□□ 0.51
TPGS1-202ENST00000588278 HDAC5Q9UQL6 1122 aa18.25■□□□□ 0.51
TPGS1-202ENST00000588278 PHKG2P15735 406 aa18.24■□□□□ 0.51
TPGS1-202ENST00000588278 SLFNL1Q499Z3 407 aa18.24■□□□□ 0.51
TPGS1-202ENST00000588278 CABP4P57796 275 aa18.24■□□□□ 0.51
TPGS1-202ENST00000588278 SEC62Q99442 399 aaKnown RBP18.24■□□□□ 0.51
TPGS1-202ENST00000588278 EPC1Q9H2F5 836 aa18.24■□□□□ 0.51
TPGS1-202ENST00000588278 JAK2O60674 1132 aa18.24■□□□□ 0.51
TPGS1-202ENST00000588278 SLU7O95391 586 aaKnown RBP18.24■□□□□ 0.51
TPGS1-202ENST00000588278 CCZ1BP86790 482 aa18.24■□□□□ 0.51
TPGS1-202ENST00000588278 CCZ1P86791 482 aaPredicted RBP18.24■□□□□ 0.51
TPGS1-202ENST00000588278 SYT10Q6XYQ8 523 aa18.24■□□□□ 0.51
TPGS1-202ENST00000588278 DDX46Q7L014 1031 aaKnown RBP18.24■□□□□ 0.51
TPGS1-202ENST00000588278 ERO1AQ96HE7 468 aa18.24■□□□□ 0.51
TPGS1-202ENST00000588278 LRRC2Q9BYS8 371 aa18.24■□□□□ 0.51
TPGS1-202ENST00000588278 TAOK2Q9UL54 1235 aa18.24■□□□□ 0.51
TPGS1-202ENST00000588278 CLCN6P51797 869 aa18.23■□□□□ 0.51
TPGS1-202ENST00000588278 CCDC85AQ96PX6 553 aaPredicted RBP18.23■□□□□ 0.51
TPGS1-202ENST00000588278 C19orf44Q9H6X5 657 aa18.23■□□□□ 0.51
TPGS1-202ENST00000588278 ZCCHC17Q9NP64 241 aaKnown RBP18.23■□□□□ 0.51
TPGS1-202ENST00000588278 VPS53Q5VIR6 699 aa18.23■□□□□ 0.51
TPGS1-202ENST00000588278 IFNL2Q8IZJ0 200 aa18.23■□□□□ 0.51
TPGS1-202ENST00000588278 CALCOCO1Q9P1Z2 691 aa18.23■□□□□ 0.51
TPGS1-202ENST00000588278 NPHP4O75161 1426 aaPredicted RBP18.22■□□□□ 0.51
TPGS1-202ENST00000588278 SLC27A2O14975 620 aa18.22■□□□□ 0.51
TPGS1-202ENST00000588278 CCAR2Q8N163 923 aaKnown RBP18.22■□□□□ 0.51
TPGS1-202ENST00000588278 CYP27B1O15528 508 aa18.22■□□□□ 0.51
TPGS1-202ENST00000588278 SEC31AO94979 1220 aaKnown RBP18.22■□□□□ 0.51
TPGS1-202ENST00000588278 NECTIN1Q15223 517 aa18.22■□□□□ 0.51
TPGS1-202ENST00000588278 BLOC1S2Q6QNY1 142 aa18.22■□□□□ 0.51
TPGS1-202ENST00000588278 TMX1Q9H3N1 280 aa18.22■□□□□ 0.51
TPGS1-202ENST00000588278 FHOD1Q9Y613 1164 aa18.22■□□□□ 0.51
TPGS1-202ENST00000588278 CACNA1FO60840 1977 aa18.21■□□□□ 0.51
TPGS1-202ENST00000588278 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.21■□□□□ 0.51
TPGS1-202ENST00000588278 ZSWIM6Q9HCJ5 1215 aa18.21■□□□□ 0.51
TPGS1-202ENST00000588278 FAM53CQ9NYF3 392 aa18.21■□□□□ 0.51
TPGS1-202ENST00000588278 BECN2A8MW95 431 aa18.21■□□□□ 0.51
TPGS1-202ENST00000588278 IQCB1Q15051 598 aa18.21■□□□□ 0.51
TPGS1-202ENST00000588278 ARHGAP29Q52LW3 1261 aa18.21■□□□□ 0.51
TPGS1-202ENST00000588278 DBNDD2Q9BQY9 259 aa18.21■□□□□ 0.51
TPGS1-202ENST00000588278 METTL22Q9BUU2 404 aaPredicted RBP18.21■□□□□ 0.51
TPGS1-202ENST00000588278 DDX19AQ9NUU7 478 aaKnown RBP18.21■□□□□ 0.51
TPGS1-202ENST00000588278 SNRPA1P09661 255 aaKnown RBP18.2■□□□□ 0.5
TPGS1-202ENST00000588278 CYP2C19P33261 490 aa18.2■□□□□ 0.5
TPGS1-202ENST00000588278 RAD51AP2Q09MP3 1159 aa18.2■□□□□ 0.5
TPGS1-202ENST00000588278 ZBTB3Q9H5J0 574 aa18.2■□□□□ 0.5
TPGS1-202ENST00000588278 DBNLQ9UJU6 430 aaKnown RBP18.2■□□□□ 0.5
TPGS1-202ENST00000588278 HSP90B1P14625 803 aaKnown RBP18.2■□□□□ 0.5
TPGS1-202ENST00000588278 ST5P78524 1137 aa18.2■□□□□ 0.5
TPGS1-202ENST00000588278 LMBR1LQ6UX01 489 aa18.2■□□□□ 0.5
TPGS1-202ENST00000588278 CHD2O14647 1828 aaKnown RBP18.2■□□□□ 0.5
TPGS1-202ENST00000588278 TUBGCP6Q96RT7 1819 aa18.2■□□□□ 0.5
TPGS1-202ENST00000588278 PLA2G4AP47712 749 aa18.2■□□□□ 0.5
TPGS1-202ENST00000588278 GYS2P54840 703 aa18.2■□□□□ 0.5
TPGS1-202ENST00000588278 PTPN21Q16825 1174 aa18.2■□□□□ 0.5
TPGS1-202ENST00000588278 SH2B1Q9NRF2 756 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms