RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 PDE8AO60658 829 aa21.78■■□□□ 1.08
TMED1-203ENST00000588259 MAP2K1Q02750 393 aaPredicted RBP21.78■■□□□ 1.08
TMED1-203ENST00000588259 TBC1D16Q8TBP0 767 aa21.78■■□□□ 1.08
TMED1-203ENST00000588259 LBX1P52954 281 aa21.77■■□□□ 1.08
TMED1-203ENST00000588259 HIRAP54198 1017 aaPredicted RBP21.77■■□□□ 1.08
TMED1-203ENST00000588259 ZC3H12CQ9C0D7 883 aaKnown RBP21.77■■□□□ 1.08
TMED1-203ENST00000588259 PRDM10Q9NQV6 1147 aa21.77■■□□□ 1.08
TMED1-203ENST00000588259 TLL2Q9Y6L7 1015 aa21.77■■□□□ 1.08
TMED1-203ENST00000588259 SPEF2Q9C093 1822 aa21.77■■□□□ 1.08
TMED1-203ENST00000588259 NEXNQ0ZGT2 675 aa21.76■■□□□ 1.07
TMED1-203ENST00000588259 TBC1D10BQ4KMP7 808 aaPredicted RBP21.76■■□□□ 1.07
TMED1-203ENST00000588259 ZC3H15Q8WU90 426 aaKnown RBP21.76■■□□□ 1.07
TMED1-203ENST00000588259 BEGAINQ9BUH8 593 aa21.76■■□□□ 1.07
TMED1-203ENST00000588259 GGA1Q9UJY5 639 aa21.76■■□□□ 1.07
TMED1-203ENST00000588259 MYH3P11055 1940 aa21.76■■□□□ 1.07
TMED1-203ENST00000588259 PI4KAP2A4QPH2 592 aa21.75■■□□□ 1.07
TMED1-203ENST00000588259 RBM26Q5T8P6 1007 aaKnown RBP21.75■■□□□ 1.07
TMED1-203ENST00000588259 KSR2Q6VAB6 950 aa21.75■■□□□ 1.07
TMED1-203ENST00000588259 SAMD7Q7Z3H4 446 aa21.75■■□□□ 1.07
TMED1-203ENST00000588259 ANKRD18AQ8IVF6 992 aa21.75■■□□□ 1.07
TMED1-203ENST00000588259 PI4KAP1Q8N8J0 262 aa21.75■■□□□ 1.07
TMED1-203ENST00000588259 MRS2Q9HD23 443 aa21.75■■□□□ 1.07
TMED1-203ENST00000588259 KCNQ5Q9NR82 932 aa21.75■■□□□ 1.07
TMED1-203ENST00000588259 SCN9AQ15858 1988 aa21.74■■□□□ 1.07
TMED1-203ENST00000588259 THSD7BQ9C0I4 1608 aa21.74■■□□□ 1.07
TMED1-203ENST00000588259 TWISTNBQ3B726 338 aaPredicted RBP21.74■■□□□ 1.07
TMED1-203ENST00000588259 CDC37L1Q7L3B6 337 aa21.74■■□□□ 1.07
TMED1-203ENST00000588259 WWC1Q8IX03 1113 aa21.74■■□□□ 1.07
TMED1-203ENST00000588259 DPF2Q92785 391 aa21.74■■□□□ 1.07
TMED1-203ENST00000588259 RTL9Q8NET4 1388 aa21.74■■□□□ 1.07
TMED1-203ENST00000588259 RPS12P25398 132 aaKnown RBP21.73■■□□□ 1.07
TMED1-203ENST00000588259 CTSWP56202 376 aa21.73■■□□□ 1.07
TMED1-203ENST00000588259 USP48Q86UV5 1035 aa21.73■■□□□ 1.07
TMED1-203ENST00000588259 PGAP2Q9UHJ9 254 aa21.73■■□□□ 1.07
TMED1-203ENST00000588259 POLR2AP24928 1970 aaKnown RBP21.72■■□□□ 1.07
TMED1-203ENST00000588259 HSPA8P11142 646 aaKnown RBP21.72■■□□□ 1.07
TMED1-203ENST00000588259 CCDC27Q2M243 656 aa21.72■■□□□ 1.07
TMED1-203ENST00000588259 CDC5LQ99459 802 aaKnown RBP21.72■■□□□ 1.07
TMED1-203ENST00000588259 PODXL2Q9NZ53 605 aa21.72■■□□□ 1.07
TMED1-203ENST00000588259 SALL2Q9Y467 1007 aaPredicted RBP21.72■■□□□ 1.07
TMED1-203ENST00000588259 AOC2O75106 756 aa21.71■■□□□ 1.07
TMED1-203ENST00000588259 IGKV5-2P06315 115 aa21.71■■□□□ 1.07
TMED1-203ENST00000588259 CWF19L2Q2TBE0 894 aaKnown RBP21.71■■□□□ 1.07
TMED1-203ENST00000588259 KRT26Q7Z3Y9 468 aa21.71■■□□□ 1.07
TMED1-203ENST00000588259 SAPCD2Q86UD0 394 aa21.71■■□□□ 1.07
TMED1-203ENST00000588259 XDHP47989 1333 aa21.71■■□□□ 1.07
TMED1-203ENST00000588259 ANP32CO43423 234 aa21.7■■□□□ 1.06
TMED1-203ENST00000588259 EGFRP00533 1210 aa21.7■■□□□ 1.06
TMED1-203ENST00000588259 SLC4A2P04920 1241 aa21.7■■□□□ 1.06
TMED1-203ENST00000588259 G2E3Q7L622 706 aa21.7■■□□□ 1.06
TMED1-203ENST00000588259 DCPSQ96C86 337 aaKnown RBP21.7■■□□□ 1.06
TMED1-203ENST00000588259 KIF4BQ2VIQ3 1234 aa21.69■■□□□ 1.06
TMED1-203ENST00000588259 UBE3BQ7Z3V4 1068 aa21.69■■□□□ 1.06
TMED1-203ENST00000588259 IL16Q14005 1332 aa21.69■■□□□ 1.06
TMED1-203ENST00000588259 NEURL1BA8MQ27 555 aa21.68■■□□□ 1.06
TMED1-203ENST00000588259 DLK2Q6UY11 383 aa21.68■■□□□ 1.06
TMED1-203ENST00000588259 GREM2Q9H772 168 aa21.68■■□□□ 1.06
TMED1-203ENST00000588259 PSME4Q14997 1843 aa21.67■■□□□ 1.06
TMED1-203ENST00000588259 FANCIQ9NVI1 1328 aa21.67■■□□□ 1.06
TMED1-203ENST00000588259 ADM5C9JUS6 153 aa21.67■■□□□ 1.06
TMED1-203ENST00000588259 VIL1P09327 827 aaKnown RBP21.67■■□□□ 1.06
TMED1-203ENST00000588259 ATP2B4P23634 1241 aa21.67■■□□□ 1.06
TMED1-203ENST00000588259 ZEB1P37275 1124 aaPredicted RBP21.67■■□□□ 1.06
TMED1-203ENST00000588259 FKBP5Q13451 457 aaPredicted RBP21.67■■□□□ 1.06
TMED1-203ENST00000588259 GGA3Q9NZ52 723 aa21.67■■□□□ 1.06
TMED1-203ENST00000588259 TSKSQ9UJT2 592 aa21.67■■□□□ 1.06
TMED1-203ENST00000588259 MAP2K2P36507 400 aa21.66■■□□□ 1.06
TMED1-203ENST00000588259 HUNKP57058 714 aa21.66■■□□□ 1.06
TMED1-203ENST00000588259 FLIIQ13045 1269 aa21.66■■□□□ 1.06
TMED1-203ENST00000588259 TTLL11Q8NHH1 800 aa21.66■■□□□ 1.06
TMED1-203ENST00000588259 CACNA1FO60840 1977 aa21.66■■□□□ 1.06
TMED1-203ENST00000588259 RSBN1LQ6PCB5 846 aaPredicted RBP21.65■■□□□ 1.06
TMED1-203ENST00000588259 SULF1Q8IWU6 871 aa21.65■■□□□ 1.06
TMED1-203ENST00000588259 FBXW7Q969H0 707 aa21.65■■□□□ 1.06
TMED1-203ENST00000588259 HHIPL1Q96JK4 782 aa21.65■■□□□ 1.06
TMED1-203ENST00000588259 MYH16Q9H6N6 1097 aa21.64■■□□□ 1.05
TMED1-203ENST00000588259 IGHMBP2P38935 993 aaKnown RBP21.63■■□□□ 1.05
TMED1-203ENST00000588259 C2orf69Q8N8R5 385 aa21.63■■□□□ 1.05
TMED1-203ENST00000588259 GBA2Q9HCG7 927 aaPredicted RBP21.63■■□□□ 1.05
TMED1-203ENST00000588259 BSDC1Q9NW68 430 aaPredicted RBP21.63■■□□□ 1.05
TMED1-203ENST00000588259 MINPP1Q9UNW1 487 aa21.63■■□□□ 1.05
TMED1-203ENST00000588259 ASTN2O75129 1339 aaPredicted RBP21.62■■□□□ 1.05
TMED1-203ENST00000588259 USP17L3A6NCW0 530 aa21.62■■□□□ 1.05
TMED1-203ENST00000588259 USP17L4A6NCW7 530 aa21.62■■□□□ 1.05
TMED1-203ENST00000588259 GCKRQ14397 625 aa21.62■■□□□ 1.05
TMED1-203ENST00000588259 USP17L1Q7RTZ2 530 aa21.62■■□□□ 1.05
TMED1-203ENST00000588259 AGBL3Q8NEM8 1001 aa21.62■■□□□ 1.05
TMED1-203ENST00000588259 DNAAF4Q8WXU2 420 aa21.62■■□□□ 1.05
TMED1-203ENST00000588259 MED23Q9ULK4 1368 aa21.61■■□□□ 1.05
TMED1-203ENST00000588259 ZNF316A6NFI3 1004 aaPredicted RBP21.61■■□□□ 1.05
TMED1-203ENST00000588259 WTIPA6NIX2 430 aaPredicted RBP21.61■■□□□ 1.05
TMED1-203ENST00000588259 H7C1W4 665 aa21.61■■□□□ 1.05
TMED1-203ENST00000588259 USP17L8P0C7I0 530 aa21.61■■□□□ 1.05
TMED1-203ENST00000588259 FAM161AQ3B820 660 aa21.61■■□□□ 1.05
TMED1-203ENST00000588259 ITGA6P23229 1130 aa21.6■■□□□ 1.05
TMED1-203ENST00000588259 CCT4P50991 539 aaKnown RBP21.6■■□□□ 1.05
TMED1-203ENST00000588259 BRPF1P55201 1214 aaPredicted RBP21.6■■□□□ 1.05
TMED1-203ENST00000588259 ZNF280AP59817 542 aaPredicted RBP21.6■■□□□ 1.05
TMED1-203ENST00000588259 EXOSC9Q06265 439 aaKnown RBP21.6■■□□□ 1.05
TMED1-203ENST00000588259 NOGQ13253 232 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms