RNA–Protein interactions for RNA: ENST00000587483.5

RUNDC3A-203, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 3,686 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-203ENST00000587483 DDX17Q92841 729 aaKnown RBP13.1□□□□□ -0.31
RUNDC3A-203ENST00000587483 KAZALD1Q96I82 304 aa13.1□□□□□ -0.31
RUNDC3A-203ENST00000587483 CHD2O14647 1828 aaKnown RBP13.1□□□□□ -0.31
RUNDC3A-203ENST00000587483 DBNDD2Q9BQY9 259 aa13.1□□□□□ -0.31
RUNDC3A-203ENST00000587483 SMC2O95347 1197 aa13.1□□□□□ -0.31
RUNDC3A-203ENST00000587483 TOB2Q14106 344 aaPredicted RBP13.1□□□□□ -0.31
RUNDC3A-203ENST00000587483 KINO60870 393 aaKnown RBP13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 NPHP4O75161 1426 aaPredicted RBP13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 ELP1O95163 1332 aa13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 TPM3P06753 285 aa13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 RPS6KB1P23443 525 aa13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 AKAP4Q5JQC9 854 aa13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 CHMP4AQ9BY43 222 aa13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 HDAC5Q9UQL6 1122 aa13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 USP16Q9Y5T5 823 aa13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 GIGYF1O75420 1035 aaPredicted RBP13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 APPP05067 770 aa13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 SCAND2PQ9GZW5 306 aaPredicted RBP13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 TMX1Q9H3N1 280 aa13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 ANKARQ7Z5J8 1434 aa13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 HIP1O00291 1037 aa13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 RNMTO43148 476 aaKnown RBP13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 ATP2B1P20020 1258 aa13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 CCAR1Q8IX12 1150 aaKnown RBP13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 LEO1Q8WVC0 666 aaPredicted RBP13.09□□□□□ -0.31
RUNDC3A-203ENST00000587483 PTPN21Q16825 1174 aa13.08□□□□□ -0.32
RUNDC3A-203ENST00000587483 EPHA10Q5JZY3 1008 aa13.08□□□□□ -0.32
RUNDC3A-203ENST00000587483 PROSER2Q86WR7 435 aaPredicted RBP13.08□□□□□ -0.32
RUNDC3A-203ENST00000587483 PXDNQ92626 1479 aa13.08□□□□□ -0.32
RUNDC3A-203ENST00000587483 ATP2B3Q16720 1220 aa13.08□□□□□ -0.32
RUNDC3A-203ENST00000587483 CCDC112Q8NEF3 446 aa13.08□□□□□ -0.32
RUNDC3A-203ENST00000587483 TOMM22Q9NS69 142 aa13.08□□□□□ -0.32
RUNDC3A-203ENST00000587483 ANKRD1Q15327 319 aa13.08□□□□□ -0.32
RUNDC3A-203ENST00000587483 ZBTB3Q9H5J0 574 aa13.08□□□□□ -0.32
RUNDC3A-203ENST00000587483 LINS1Q8NG48 757 aa13.07□□□□□ -0.32
RUNDC3A-203ENST00000587483 ZNF594Q96JF6 807 aaPredicted RBP13.07□□□□□ -0.32
RUNDC3A-203ENST00000587483 NPHP3Q7Z494 1330 aa13.07□□□□□ -0.32
RUNDC3A-203ENST00000587483 LMBR1LQ6UX01 489 aa13.07□□□□□ -0.32
RUNDC3A-203ENST00000587483 CCDC144CPQ8IYA2 1237 aa13.07□□□□□ -0.32
RUNDC3A-203ENST00000587483 KLHL34Q8N239 644 aa13.07□□□□□ -0.32
RUNDC3A-203ENST00000587483 MED23Q9ULK4 1368 aa13.07□□□□□ -0.32
RUNDC3A-203ENST00000587483 CPLX1O14810 134 aa13.07□□□□□ -0.32
RUNDC3A-203ENST00000587483 GCP02774 474 aa13.07□□□□□ -0.32
RUNDC3A-203ENST00000587483 PAXIP1Q6ZW49 1069 aaPredicted RBP13.07□□□□□ -0.32
RUNDC3A-203ENST00000587483 CREBRFQ8IUR6 639 aa13.07□□□□□ -0.32
RUNDC3A-203ENST00000587483 FSIP1Q8NA03 581 aa13.07□□□□□ -0.32
RUNDC3A-203ENST00000587483 PGBD1Q96JS3 809 aa13.07□□□□□ -0.32
RUNDC3A-203ENST00000587483 LMO7Q8WWI1 1683 aa13.06□□□□□ -0.32
RUNDC3A-203ENST00000587483 ANKRD13DQ6ZTN6 518 aa13.06□□□□□ -0.32
RUNDC3A-203ENST00000587483 HOMER1Q86YM7 354 aa13.06□□□□□ -0.32
RUNDC3A-203ENST00000587483 CLSTN2Q9H4D0 955 aa13.06□□□□□ -0.32
RUNDC3A-203ENST00000587483 USP54Q70EL1 1684 aa13.06□□□□□ -0.32
RUNDC3A-203ENST00000587483 DDX19AQ9NUU7 478 aaKnown RBP13.06□□□□□ -0.32
RUNDC3A-203ENST00000587483 SLIT1O75093 1534 aa13.06□□□□□ -0.32
RUNDC3A-203ENST00000587483 ARHGAP23Q9P227 1491 aa13.06□□□□□ -0.32
RUNDC3A-203ENST00000587483 A0A1B0GVL5 298 aa13.06□□□□□ -0.32
RUNDC3A-203ENST00000587483 RXRAP19793 462 aa13.06□□□□□ -0.32
RUNDC3A-203ENST00000587483 STK38Q15208 465 aa13.06□□□□□ -0.32
RUNDC3A-203ENST00000587483 CCDC82Q8N4S0 544 aa13.06□□□□□ -0.32
RUNDC3A-203ENST00000587483 A0A0G2JLW4 131 aa13.05□□□□□ -0.32
RUNDC3A-203ENST00000587483 ZNF75DP51815 510 aa13.05□□□□□ -0.32
RUNDC3A-203ENST00000587483 TTLL5Q6EMB2 1281 aa13.05□□□□□ -0.32
RUNDC3A-203ENST00000587483 GPHNQ9NQX3 736 aaPredicted RBP13.05□□□□□ -0.32
RUNDC3A-203ENST00000587483 GJB4Q9NTQ9 266 aa13.05□□□□□ -0.32
RUNDC3A-203ENST00000587483 NFAT5O94916 1531 aa13.05□□□□□ -0.32
RUNDC3A-203ENST00000587483 TAF5LO75529 589 aa13.05□□□□□ -0.32
RUNDC3A-203ENST00000587483 IGKV5-2P06315 115 aa13.04□□□□□ -0.32
RUNDC3A-203ENST00000587483 CDK11BP21127 795 aaKnown RBP13.04□□□□□ -0.32
RUNDC3A-203ENST00000587483 AOPEPQ8N6M6 819 aa13.04□□□□□ -0.32
RUNDC3A-203ENST00000587483 CHMP4CQ96CF2 233 aa13.04□□□□□ -0.32
RUNDC3A-203ENST00000587483 COL15A1P39059 1388 aa13.04□□□□□ -0.32
RUNDC3A-203ENST00000587483 ZSCAN20P17040 1043 aaPredicted RBP13.04□□□□□ -0.32
RUNDC3A-203ENST00000587483 CCAR2Q8N163 923 aaKnown RBP13.04□□□□□ -0.32
RUNDC3A-203ENST00000587483 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
RUNDC3A-203ENST00000587483 ZSCAN25Q6NSZ9 544 aa13.04□□□□□ -0.32
RUNDC3A-203ENST00000587483 PLA2G4DQ86XP0 818 aa13.04□□□□□ -0.32
RUNDC3A-203ENST00000587483 GTF3C6Q969F1 213 aa13.04□□□□□ -0.32
RUNDC3A-203ENST00000587483 ZNF496Q96IT1 587 aaPredicted RBP13.04□□□□□ -0.32
RUNDC3A-203ENST00000587483 DBNLQ9UJU6 430 aaKnown RBP13.04□□□□□ -0.32
RUNDC3A-203ENST00000587483 CFAP45Q9UL16 551 aa13.04□□□□□ -0.32
RUNDC3A-203ENST00000587483 SKILP12757 684 aa13.03□□□□□ -0.32
RUNDC3A-203ENST00000587483 RBM43Q6ZSC3 357 aaKnown RBP13.03□□□□□ -0.32
RUNDC3A-203ENST00000587483 CACTINQ8WUQ7 758 aaKnown RBP13.03□□□□□ -0.32
RUNDC3A-203ENST00000587483 HMG20BQ9P0W2 317 aa13.03□□□□□ -0.32
RUNDC3A-203ENST00000587483 TDRD7Q8NHU6 1098 aaKnown RBP13.03□□□□□ -0.32
RUNDC3A-203ENST00000587483 PTPDC1A2A3K4 754 aa13.03□□□□□ -0.32
RUNDC3A-203ENST00000587483 MARCKSP29966 332 aaPredicted RBP13.03□□□□□ -0.32
RUNDC3A-203ENST00000587483 RESTQ13127 1097 aa13.03□□□□□ -0.32
RUNDC3A-203ENST00000587483 C11orf57Q6ZUT1 292 aaPredicted RBP13.03□□□□□ -0.32
RUNDC3A-203ENST00000587483 AXIN2Q9Y2T1 843 aa13.03□□□□□ -0.32
RUNDC3A-203ENST00000587483 UTYO14607 1347 aa13.03□□□□□ -0.32
RUNDC3A-203ENST00000587483 FER1L4A9Z1Z3 1794 aa13.03□□□□□ -0.32
RUNDC3A-203ENST00000587483 ERICH4A6NGS2 130 aa13.02□□□□□ -0.32
RUNDC3A-203ENST00000587483 CTIFO43310 598 aaKnown RBP13.02□□□□□ -0.32
RUNDC3A-203ENST00000587483 CYP21A2P08686 494 aa13.02□□□□□ -0.32
RUNDC3A-203ENST00000587483 CABP4P57796 275 aa13.02□□□□□ -0.32
RUNDC3A-203ENST00000587483 CCDC144BQ3MJ40 725 aa13.02□□□□□ -0.32
RUNDC3A-203ENST00000587483 AMOTQ4VCS5 1084 aa13.02□□□□□ -0.32
RUNDC3A-203ENST00000587483 SYNE3Q6ZMZ3 975 aa13.02□□□□□ -0.32
RUNDC3A-203ENST00000587483 ANKRD7Q92527 254 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms