RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 MICALL2Q8IY33 904 aa10.09□□□□□ -0.79
VMP1-204ENST00000587259 CCDC146Q8IYE0 955 aa10.09□□□□□ -0.79
VMP1-204ENST00000587259 RTFDC1Q9BY42 306 aaPredicted RBP10.09□□□□□ -0.79
VMP1-204ENST00000587259 MCOLN1Q9GZU1 580 aa10.09□□□□□ -0.79
VMP1-204ENST00000587259 DBNDD1Q9H9R9 158 aa10.09□□□□□ -0.79
VMP1-204ENST00000587259 TRMT112Q9UI30 125 aaKnown RBP10.09□□□□□ -0.79
VMP1-204ENST00000587259 CNOT7Q9UIV1 285 aaKnown RBP10.09□□□□□ -0.79
VMP1-204ENST00000587259 ADAMTS8Q9UP79 889 aa10.09□□□□□ -0.79
VMP1-204ENST00000587259 ATP5J2-PTCD1G3V325 749 aa10.08□□□□□ -0.8
VMP1-204ENST00000587259 TBC1D10BQ4KMP7 808 aaPredicted RBP10.08□□□□□ -0.8
VMP1-204ENST00000587259 RBM26Q5T8P6 1007 aaKnown RBP10.08□□□□□ -0.8
VMP1-204ENST00000587259 SP8Q8IXZ3 490 aa10.08□□□□□ -0.8
VMP1-204ENST00000587259 TMX4Q9H1E5 349 aaPredicted RBP10.08□□□□□ -0.8
VMP1-204ENST00000587259 CHPF2Q9P2E5 772 aa10.08□□□□□ -0.8
VMP1-204ENST00000587259 LAS1LQ9Y4W2 734 aaKnown RBP10.08□□□□□ -0.8
VMP1-204ENST00000587259 CASP8AP2Q9UKL3 1982 aa10.08□□□□□ -0.8
VMP1-204ENST00000587259 ASTN2O75129 1339 aaPredicted RBP10.07□□□□□ -0.8
VMP1-204ENST00000587259 ADM5C9JUS6 153 aa10.07□□□□□ -0.8
VMP1-204ENST00000587259 PSMD14O00487 310 aa10.07□□□□□ -0.8
VMP1-204ENST00000587259 GPSM2P81274 684 aa10.07□□□□□ -0.8
VMP1-204ENST00000587259 GRAPQ13588 217 aa10.07□□□□□ -0.8
VMP1-204ENST00000587259 DOK7Q18PE1 504 aa10.07□□□□□ -0.8
VMP1-204ENST00000587259 DDX46Q7L014 1031 aaKnown RBP10.07□□□□□ -0.8
VMP1-204ENST00000587259 GRAPLQ8TC17 118 aaPredicted RBP10.07□□□□□ -0.8
VMP1-204ENST00000587259 CELF1Q92879 486 aaKnown RBP10.07□□□□□ -0.8
VMP1-204ENST00000587259 FAM89AQ96GI7 184 aa10.07□□□□□ -0.8
VMP1-204ENST00000587259 ERBB4Q15303 1308 aa10.07□□□□□ -0.8
VMP1-204ENST00000587259 BBOX1O75936 387 aa10.06□□□□□ -0.8
VMP1-204ENST00000587259 MAP2K2P36507 400 aa10.06□□□□□ -0.8
VMP1-204ENST00000587259 TMPOP42166 694 aaKnown RBP10.06□□□□□ -0.8
VMP1-204ENST00000587259 HUNKP57058 714 aa10.06□□□□□ -0.8
VMP1-204ENST00000587259 MLLT1Q03111 559 aaPredicted RBP10.06□□□□□ -0.8
VMP1-204ENST00000587259 TCIRG1Q13488 830 aa10.06□□□□□ -0.8
VMP1-204ENST00000587259 DGKZQ13574 1117 aa10.06□□□□□ -0.8
VMP1-204ENST00000587259 GRIPAP1Q4V328 841 aa10.06□□□□□ -0.8
VMP1-204ENST00000587259 SUPT20HQ8NEM7 779 aa10.06□□□□□ -0.8
VMP1-204ENST00000587259 JARID2Q92833 1246 aaPredicted RBP10.06□□□□□ -0.8
VMP1-204ENST00000587259 RUNDC1Q96C34 613 aa10.06□□□□□ -0.8
VMP1-204ENST00000587259 POLLQ9UGP5 575 aa10.06□□□□□ -0.8
VMP1-204ENST00000587259 PGAP2Q9UHJ9 254 aa10.06□□□□□ -0.8
VMP1-204ENST00000587259 SCAF8Q9UPN6 1271 aaKnown RBP10.06□□□□□ -0.8
VMP1-204ENST00000587259 SH3TC1Q8TE82 1336 aa10.06□□□□□ -0.8
VMP1-204ENST00000587259 RTL9Q8NET4 1388 aa10.05□□□□□ -0.8
VMP1-204ENST00000587259 C6orf229H3BNL8 230 aa10.05□□□□□ -0.8
VMP1-204ENST00000587259 SLC34A2O95436 690 aa10.05□□□□□ -0.8
VMP1-204ENST00000587259 TNIP1Q15025 636 aa10.05□□□□□ -0.8
VMP1-204ENST00000587259 WASHC4Q2M389 1173 aa10.05□□□□□ -0.8
VMP1-204ENST00000587259 CDC37L1Q7L3B6 337 aa10.05□□□□□ -0.8
VMP1-204ENST00000587259 NSFL1CQ9UNZ2 370 aaKnown RBP10.05□□□□□ -0.8
VMP1-204ENST00000587259 ANKRD36CQ5JPF3 1778 aa10.05□□□□□ -0.8
VMP1-204ENST00000587259 DDX60Q8IY21 1712 aaKnown RBP10.04□□□□□ -0.8
VMP1-204ENST00000587259 H7C1D1 291 aa10.04□□□□□ -0.8
VMP1-204ENST00000587259 ECE2O60344 883 aa10.04□□□□□ -0.8
VMP1-204ENST00000587259 BRPF1P55201 1214 aaPredicted RBP10.04□□□□□ -0.8
VMP1-204ENST00000587259 GOLGA2Q08379 1002 aa10.04□□□□□ -0.8
VMP1-204ENST00000587259 KRT26Q7Z3Y9 468 aa10.04□□□□□ -0.8
VMP1-204ENST00000587259 KIF12Q96FN5 646 aa10.04□□□□□ -0.8
VMP1-204ENST00000587259 CCDC85AQ96PX6 553 aaPredicted RBP10.04□□□□□ -0.8
VMP1-204ENST00000587259 VPS33BQ9H267 617 aa10.04□□□□□ -0.8
VMP1-204ENST00000587259 SUPT16HQ9Y5B9 1047 aaKnown RBP10.04□□□□□ -0.8
VMP1-204ENST00000587259 WTIPA6NIX2 430 aaPredicted RBP10.03□□□□□ -0.8
VMP1-204ENST00000587259 FAM155AB1AL88 458 aaPredicted RBP10.03□□□□□ -0.8
VMP1-204ENST00000587259 RGS19P49795 217 aa10.03□□□□□ -0.8
VMP1-204ENST00000587259 CCDC27Q2M243 656 aa10.03□□□□□ -0.8
VMP1-204ENST00000587259 SEC31BQ9NQW1 1179 aa10.03□□□□□ -0.8
VMP1-204ENST00000587259 TRIM35Q9UPQ4 493 aa10.03□□□□□ -0.8
VMP1-204ENST00000587259 ZNF521Q96K83 1311 aa10.03□□□□□ -0.8
VMP1-204ENST00000587259 LRRC37AA6NMS7 1700 aa10.02□□□□□ -0.8
VMP1-204ENST00000587259 E9PSI1 815 aa10.02□□□□□ -0.81
VMP1-204ENST00000587259 CHL1O00533 1208 aa10.02□□□□□ -0.81
VMP1-204ENST00000587259 MAP3K13O43283 966 aa10.02□□□□□ -0.81
VMP1-204ENST00000587259 NUBP1P53384 320 aa10.02□□□□□ -0.81
VMP1-204ENST00000587259 SOX10P56693 466 aa10.02□□□□□ -0.81
VMP1-204ENST00000587259 KIF23Q02241 960 aaPredicted RBP10.02□□□□□ -0.81
VMP1-204ENST00000587259 HSP90AB3PQ58FF7 597 aa10.02□□□□□ -0.81
VMP1-204ENST00000587259 HDGFL1Q5TGJ6 251 aa10.02□□□□□ -0.81
VMP1-204ENST00000587259 RGMBQ6NW40 437 aa10.02□□□□□ -0.81
VMP1-204ENST00000587259 MOB2Q70IA6 237 aa10.02□□□□□ -0.81
VMP1-204ENST00000587259 ZC3H15Q8WU90 426 aaKnown RBP10.02□□□□□ -0.81
VMP1-204ENST00000587259 ISCA1Q9BUE6 129 aa10.02□□□□□ -0.81
VMP1-204ENST00000587259 GBA2Q9HCG7 927 aaPredicted RBP10.02□□□□□ -0.81
VMP1-204ENST00000587259 GGA3Q9NZ52 723 aa10.02□□□□□ -0.81
VMP1-204ENST00000587259 ZBTB47Q9UFB7 747 aaPredicted RBP10.02□□□□□ -0.81
VMP1-204ENST00000587259 FBXO3Q9UK99 471 aa10.02□□□□□ -0.81
VMP1-204ENST00000587259 CDHR2Q9BYE9 1310 aa10.02□□□□□ -0.81
VMP1-204ENST00000587259 POLR2AP24928 1970 aaKnown RBP10.01□□□□□ -0.81
VMP1-204ENST00000587259 TNRC18O15417 2968 aaPredicted RBP10.01□□□□□ -0.81
VMP1-204ENST00000587259 IRS4O14654 1257 aaPredicted RBP10.01□□□□□ -0.81
VMP1-204ENST00000587259 TRPA1O75762 1119 aa10.01□□□□□ -0.81
VMP1-204ENST00000587259 ZNF157P51786 506 aaPredicted RBP10.01□□□□□ -0.81
VMP1-204ENST00000587259 NOGQ13253 232 aa10.01□□□□□ -0.81
VMP1-204ENST00000587259 KIF4BQ2VIQ3 1234 aa10.01□□□□□ -0.81
VMP1-204ENST00000587259 PRAMEF18Q5VWM3 479 aa10.01□□□□□ -0.81
VMP1-204ENST00000587259 ANKRD13DQ6ZTN6 518 aa10.01□□□□□ -0.81
VMP1-204ENST00000587259 PLBD2Q8NHP8 589 aa10.01□□□□□ -0.81
VMP1-204ENST00000587259 TBC1D16Q8TBP0 767 aa10.01□□□□□ -0.81
VMP1-204ENST00000587259 HHIPL1Q96JK4 782 aa10.01□□□□□ -0.81
VMP1-204ENST00000587259 PHAXQ9H814 394 aaKnown RBP10.01□□□□□ -0.81
VMP1-204ENST00000587259 SCN9AQ15858 1988 aa10.01□□□□□ -0.81
VMP1-204ENST00000587259 ELL2O00472 640 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms