RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 GMPSP49915 693 aaPredicted RBP22.48■■□□□ 1.19
TPM4-206ENST00000587201 DOK7Q18PE1 504 aa22.48■■□□□ 1.19
TPM4-206ENST00000587201 GPRC5DQ9NZD1 345 aa22.48■■□□□ 1.19
TPM4-206ENST00000587201 MYH3P11055 1940 aa22.48■■□□□ 1.19
TPM4-206ENST00000587201 XDHP47989 1333 aa22.48■■□□□ 1.19
TPM4-206ENST00000587201 G3V3G9 751 aa22.47■■□□□ 1.19
TPM4-206ENST00000587201 ECE2O60344 883 aa22.47■■□□□ 1.19
TPM4-206ENST00000587201 IGHMBP2P38935 993 aaKnown RBP22.47■■□□□ 1.19
TPM4-206ENST00000587201 DCAF8Q5TAQ9 597 aa22.47■■□□□ 1.19
TPM4-206ENST00000587201 MAP1SQ66K74 1059 aaPredicted RBP22.47■■□□□ 1.19
TPM4-206ENST00000587201 SLC4A10Q6U841 1118 aa22.47■■□□□ 1.19
TPM4-206ENST00000587201 USP50Q70EL3 339 aaPredicted RBP22.47■■□□□ 1.19
TPM4-206ENST00000587201 CDCA7LQ96GN5 454 aa22.47■■□□□ 1.19
TPM4-206ENST00000587201 BSDC1Q9NW68 430 aaPredicted RBP22.47■■□□□ 1.19
TPM4-206ENST00000587201 ADAMTSL1Q8N6G6 1762 aa22.47■■□□□ 1.19
TPM4-206ENST00000587201 ITGA6P23229 1130 aa22.46■■□□□ 1.19
TPM4-206ENST00000587201 CNTROBQ8N137 903 aa22.46■■□□□ 1.19
TPM4-206ENST00000587201 ADARB2Q9NS39 739 aaKnown RBP22.46■■□□□ 1.19
TPM4-206ENST00000587201 PASKQ96RG2 1323 aa22.46■■□□□ 1.19
TPM4-206ENST00000587201 ITGBL1O95965 494 aaPredicted RBP22.45■■□□□ 1.18
TPM4-206ENST00000587201 CSF1RP07333 972 aa22.45■■□□□ 1.18
TPM4-206ENST00000587201 ATP2B4P23634 1241 aa22.45■■□□□ 1.18
TPM4-206ENST00000587201 FAM161AQ3B820 660 aa22.45■■□□□ 1.18
TPM4-206ENST00000587201 MRPL50Q8N5N7 158 aaKnown RBP22.45■■□□□ 1.18
TPM4-206ENST00000587201 MINPP1Q9UNW1 487 aa22.45■■□□□ 1.18
TPM4-206ENST00000587201 PSMD14O00487 310 aa22.44■■□□□ 1.18
TPM4-206ENST00000587201 SRCIN1Q9C0H9 1055 aa22.44■■□□□ 1.18
TPM4-206ENST00000587201 CREBZFQ9NS37 354 aa22.44■■□□□ 1.18
TPM4-206ENST00000587201 GRM8O00222 908 aa22.43■■□□□ 1.18
TPM4-206ENST00000587201 ALDH1L1O75891 902 aa22.43■■□□□ 1.18
TPM4-206ENST00000587201 MPHOSPH8Q99549 860 aa22.43■■□□□ 1.18
TPM4-206ENST00000587201 C9orf78Q9NZ63 289 aaPredicted RBP22.43■■□□□ 1.18
TPM4-206ENST00000587201 ZBTB12Q9Y330 459 aaPredicted RBP22.43■■□□□ 1.18
TPM4-206ENST00000587201 CHMP3Q9Y3E7 222 aa22.43■■□□□ 1.18
TPM4-206ENST00000587201 SSH1Q8WYL5 1049 aa22.42■■□□□ 1.18
TPM4-206ENST00000587201 KCNQ5Q9NR82 932 aa22.42■■□□□ 1.18
TPM4-206ENST00000587201 CNOT7Q9UIV1 285 aaKnown RBP22.42■■□□□ 1.18
TPM4-206ENST00000587201 SPEF2Q9C093 1822 aa22.41■■□□□ 1.18
TPM4-206ENST00000587201 ANKRD18BA2A2Z9 1011 aa22.41■■□□□ 1.18
TPM4-206ENST00000587201 H7C1D1 291 aa22.41■■□□□ 1.18
TPM4-206ENST00000587201 FOXO4P98177 505 aa22.41■■□□□ 1.18
TPM4-206ENST00000587201 DIEXFQ68CQ4 756 aaKnown RBP22.41■■□□□ 1.18
TPM4-206ENST00000587201 PTPRCP08575 1304 aa22.4■■□□□ 1.18
TPM4-206ENST00000587201 CCT4P50991 539 aaKnown RBP22.4■■□□□ 1.18
TPM4-206ENST00000587201 MICALL2Q8IY33 904 aa22.4■■□□□ 1.18
TPM4-206ENST00000587201 TRMT2AQ8IZ69 625 aaKnown RBP22.4■■□□□ 1.18
TPM4-206ENST00000587201 DPF2Q92785 391 aa22.4■■□□□ 1.18
TPM4-206ENST00000587201 SHTN1A0MZ66 631 aa22.39■■□□□ 1.17
TPM4-206ENST00000587201 TMEM88BA6NKF7 163 aa22.39■■□□□ 1.17
TPM4-206ENST00000587201 IFIT5Q13325 482 aaKnown RBP22.39■■□□□ 1.17
TPM4-206ENST00000587201 JMYQ8N9B5 988 aa22.39■■□□□ 1.17
TPM4-206ENST00000587201 WTIPA6NIX2 430 aaPredicted RBP22.38■■□□□ 1.17
TPM4-206ENST00000587201 RPS12P25398 132 aaKnown RBP22.38■■□□□ 1.17
TPM4-206ENST00000587201 ALDH1L2Q3SY69 923 aa22.38■■□□□ 1.17
TPM4-206ENST00000587201 EPHA10Q5JZY3 1008 aa22.38■■□□□ 1.17
TPM4-206ENST00000587201 LMBR1LQ6UX01 489 aa22.38■■□□□ 1.17
TPM4-206ENST00000587201 TRPM4Q8TD43 1214 aa22.38■■□□□ 1.17
TPM4-206ENST00000587201 ANKRD2Q9GZV1 360 aa22.38■■□□□ 1.17
TPM4-206ENST00000587201 MKRN1Q9UHC7 482 aaKnown RBP22.38■■□□□ 1.17
TPM4-206ENST00000587201 LEMD3Q9Y2U8 911 aa22.38■■□□□ 1.17
TPM4-206ENST00000587201 MIER1Q8N108 512 aa22.37■■□□□ 1.17
TPM4-206ENST00000587201 SMC4Q9NTJ3 1288 aa22.37■■□□□ 1.17
TPM4-206ENST00000587201 MED23Q9ULK4 1368 aa22.37■■□□□ 1.17
TPM4-206ENST00000587201 VIL1P09327 827 aaKnown RBP22.36■■□□□ 1.17
TPM4-206ENST00000587201 HIRAP54198 1017 aaPredicted RBP22.36■■□□□ 1.17
TPM4-206ENST00000587201 CT47B1P0C2W7 299 aaPredicted RBP22.35■■□□□ 1.17
TPM4-206ENST00000587201 CHRNDQ07001 517 aa22.35■■□□□ 1.17
TPM4-206ENST00000587201 CCDC57Q2TAC2 916 aa22.35■■□□□ 1.17
TPM4-206ENST00000587201 TAF7LQ5H9L4 462 aa22.35■■□□□ 1.17
TPM4-206ENST00000587201 SAMD7Q7Z3H4 446 aa22.35■■□□□ 1.17
TPM4-206ENST00000587201 PODNQ7Z5L7 613 aa22.35■■□□□ 1.17
TPM4-206ENST00000587201 ZNF804BA4D1E1 1349 aa22.34■■□□□ 1.17
TPM4-206ENST00000587201 NBPF7P0C2Y1 421 aaPredicted RBP22.34■■□□□ 1.17
TPM4-206ENST00000587201 KCNJ4P48050 445 aa22.34■■□□□ 1.17
TPM4-206ENST00000587201 FMR1Q06787 632 aaKnown RBP eCLIP22.34■■□□□ 1.17
TPM4-206ENST00000587201 TBC1D10BQ4KMP7 808 aaPredicted RBP22.34■■□□□ 1.17
TPM4-206ENST00000587201 ZC3H15Q8WU90 426 aaKnown RBP22.34■■□□□ 1.17
TPM4-206ENST00000587201 SUCLG2Q96I99 432 aa22.34■■□□□ 1.17
TPM4-206ENST00000587201 SCN9AQ15858 1988 aa22.34■■□□□ 1.17
TPM4-206ENST00000587201 TRAF5O00463 557 aa22.33■■□□□ 1.17
TPM4-206ENST00000587201 RBM26Q5T8P6 1007 aaKnown RBP22.33■■□□□ 1.17
TPM4-206ENST00000587201 RSBN1LQ6PCB5 846 aaPredicted RBP22.33■■□□□ 1.17
TPM4-206ENST00000587201 PGAP2Q9UHJ9 254 aa22.33■■□□□ 1.17
TPM4-206ENST00000587201 USP17L3A6NCW0 530 aa22.32■■□□□ 1.16
TPM4-206ENST00000587201 USP17L4A6NCW7 530 aa22.32■■□□□ 1.16
TPM4-206ENST00000587201 USP17L1Q7RTZ2 530 aa22.32■■□□□ 1.16
TPM4-206ENST00000587201 TXNRD3Q86VQ6 643 aa22.32■■□□□ 1.16
TPM4-206ENST00000587201 ZNF594Q96JF6 807 aaPredicted RBP22.32■■□□□ 1.16
TPM4-206ENST00000587201 GLIS2Q9BZE0 524 aaPredicted RBP22.32■■□□□ 1.16
TPM4-206ENST00000587201 COA1Q9GZY4 146 aa22.32■■□□□ 1.16
TPM4-206ENST00000587201 CNTNAP1P78357 1384 aa22.32■■□□□ 1.16
TPM4-206ENST00000587201 UTYO14607 1347 aa22.31■■□□□ 1.16
TPM4-206ENST00000587201 TAF5LO75529 589 aa22.31■■□□□ 1.16
TPM4-206ENST00000587201 LDHAL6AQ6ZMR3 332 aa22.31■■□□□ 1.16
TPM4-206ENST00000587201 AGBL3Q8NEM8 1001 aa22.31■■□□□ 1.16
TPM4-206ENST00000587201 HELBQ8NG08 1087 aaPredicted RBP22.31■■□□□ 1.16
TPM4-206ENST00000587201 CNNM1Q9NRU3 951 aa22.31■■□□□ 1.16
TPM4-206ENST00000587201 ABT1Q9ULW3 272 aaKnown RBP22.31■■□□□ 1.16
TPM4-206ENST00000587201 EGFRP00533 1210 aa22.3■■□□□ 1.16
TPM4-206ENST00000587201 CDC37L1Q7L3B6 337 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms