RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 ADARB2Q9NS39 739 aaKnown RBP16.83■□□□□ 0.28
H3F3B-205ENST00000587171 RIMBP2O15034 1052 aa16.82■□□□□ 0.28
H3F3B-205ENST00000587171 CASP7P55210 303 aa16.82■□□□□ 0.28
H3F3B-205ENST00000587171 CDC5LQ99459 802 aaKnown RBP16.82■□□□□ 0.28
H3F3B-205ENST00000587171 PLA2G12BQ9BX93 195 aa16.82■□□□□ 0.28
H3F3B-205ENST00000587171 GREM2Q9H772 168 aa16.82■□□□□ 0.28
H3F3B-205ENST00000587171 ANKIB1Q9P2G1 1089 aa16.82■□□□□ 0.28
H3F3B-205ENST00000587171 XDHP47989 1333 aa16.81■□□□□ 0.28
H3F3B-205ENST00000587171 TMEM88BA6NKF7 163 aa16.81■□□□□ 0.28
H3F3B-205ENST00000587171 ECE2O60344 883 aa16.81■□□□□ 0.28
H3F3B-205ENST00000587171 UFL1O94874 794 aa16.81■□□□□ 0.28
H3F3B-205ENST00000587171 GPR101Q96P66 508 aaPredicted RBP16.81■□□□□ 0.28
H3F3B-205ENST00000587171 BCL2L13Q9BXK5 485 aa16.81■□□□□ 0.28
H3F3B-205ENST00000587171 GGA1Q9UJY5 639 aa16.81■□□□□ 0.28
H3F3B-205ENST00000587171 PSMD14O00487 310 aa16.8■□□□□ 0.28
H3F3B-205ENST00000587171 ZC3H12CQ9C0D7 883 aaKnown RBP16.8■□□□□ 0.28
H3F3B-205ENST00000587171 BSDC1Q9NW68 430 aaPredicted RBP16.8■□□□□ 0.28
H3F3B-205ENST00000587171 CNTNAP1P78357 1384 aa16.79■□□□□ 0.28
H3F3B-205ENST00000587171 F6X3S4 739 aa16.79■□□□□ 0.28
H3F3B-205ENST00000587171 DOK7Q18PE1 504 aa16.79■□□□□ 0.28
H3F3B-205ENST00000587171 BEND3Q5T5X7 828 aa16.79■□□□□ 0.28
H3F3B-205ENST00000587171 DPF2Q92785 391 aa16.79■□□□□ 0.28
H3F3B-205ENST00000587171 MKRN1Q9UHC7 482 aaKnown RBP16.79■□□□□ 0.28
H3F3B-205ENST00000587171 CSF1RP07333 972 aa16.78■□□□□ 0.28
H3F3B-205ENST00000587171 KCNQ5Q9NR82 932 aa16.78■□□□□ 0.28
H3F3B-205ENST00000587171 CNOT7Q9UIV1 285 aaKnown RBP16.78■□□□□ 0.28
H3F3B-205ENST00000587171 ZBTB12Q9Y330 459 aaPredicted RBP16.78■□□□□ 0.28
H3F3B-205ENST00000587171 POLR2AP24928 1970 aaKnown RBP16.78■□□□□ 0.28
H3F3B-205ENST00000587171 SHTN1A0MZ66 631 aa16.77■□□□□ 0.28
H3F3B-205ENST00000587171 ATP2B4P23634 1241 aa16.77■□□□□ 0.28
H3F3B-205ENST00000587171 RPS12P25398 132 aaKnown RBP16.77■□□□□ 0.28
H3F3B-205ENST00000587171 FAM161AQ3B820 660 aa16.77■□□□□ 0.28
H3F3B-205ENST00000587171 MICALL2Q8IY33 904 aa16.77■□□□□ 0.28
H3F3B-205ENST00000587171 TRPM4Q8TD43 1214 aa16.77■□□□□ 0.28
H3F3B-205ENST00000587171 PGAP2Q9UHJ9 254 aa16.77■□□□□ 0.28
H3F3B-205ENST00000587171 MINPP1Q9UNW1 487 aa16.77■□□□□ 0.28
H3F3B-205ENST00000587171 E9PSI1 815 aa16.76■□□□□ 0.27
H3F3B-205ENST00000587171 H7C1D1 291 aa16.76■□□□□ 0.27
H3F3B-205ENST00000587171 ITGA6P23229 1130 aa16.76■□□□□ 0.27
H3F3B-205ENST00000587171 HIRAP54198 1017 aaPredicted RBP16.76■□□□□ 0.27
H3F3B-205ENST00000587171 ZC3H15Q8WU90 426 aaKnown RBP16.76■□□□□ 0.27
H3F3B-205ENST00000587171 ZNF609O15014 1411 aa16.76■□□□□ 0.27
H3F3B-205ENST00000587171 A0A1B0GUL6 1792 aa16.76■□□□□ 0.27
H3F3B-205ENST00000587171 MED23Q9ULK4 1368 aa16.76■□□□□ 0.27
H3F3B-205ENST00000587171 ZNF646O15015 1829 aaPredicted RBP16.75■□□□□ 0.27
H3F3B-205ENST00000587171 VIL1P09327 827 aaKnown RBP16.75■□□□□ 0.27
H3F3B-205ENST00000587171 IGHMBP2P38935 993 aaKnown RBP16.75■□□□□ 0.27
H3F3B-205ENST00000587171 FMR1Q06787 632 aaKnown RBP eCLIP16.75■□□□□ 0.27
H3F3B-205ENST00000587171 WTIPA6NIX2 430 aaPredicted RBP16.74■□□□□ 0.27
H3F3B-205ENST00000587171 RASSF10A6NK89 507 aa16.74■□□□□ 0.27
H3F3B-205ENST00000587171 G3V3G9 751 aa16.74■□□□□ 0.27
H3F3B-205ENST00000587171 CCER2I3L3R5 266 aa16.74■□□□□ 0.27
H3F3B-205ENST00000587171 TRAF5O00463 557 aa16.74■□□□□ 0.27
H3F3B-205ENST00000587171 CCT4P50991 539 aaKnown RBP16.74■□□□□ 0.27
H3F3B-205ENST00000587171 FOXO4P98177 505 aa16.74■□□□□ 0.27
H3F3B-205ENST00000587171 DCAF8Q5TAQ9 597 aa16.74■□□□□ 0.27
H3F3B-205ENST00000587171 GRM8O00222 908 aa16.73■□□□□ 0.27
H3F3B-205ENST00000587171 ALDH1L1O75891 902 aa16.73■□□□□ 0.27
H3F3B-205ENST00000587171 HSPA1AP0DMV8 641 aaKnown RBP16.73■□□□□ 0.27
H3F3B-205ENST00000587171 HSPA1BP0DMV9 641 aaKnown RBP16.73■□□□□ 0.27
H3F3B-205ENST00000587171 VEGFBP49765 207 aa16.73■□□□□ 0.27
H3F3B-205ENST00000587171 SLFN5Q08AF3 891 aa16.73■□□□□ 0.27
H3F3B-205ENST00000587171 SAMD7Q7Z3H4 446 aa16.73■□□□□ 0.27
H3F3B-205ENST00000587171 EGFRP00533 1210 aa16.72■□□□□ 0.27
H3F3B-205ENST00000587171 CST9Q5W186 159 aa16.72■□□□□ 0.27
H3F3B-205ENST00000587171 PODNQ7Z5L7 613 aa16.72■□□□□ 0.27
H3F3B-205ENST00000587171 MPHOSPH8Q99549 860 aa16.72■□□□□ 0.27
H3F3B-205ENST00000587171 GLIS2Q9BZE0 524 aaPredicted RBP16.72■□□□□ 0.27
H3F3B-205ENST00000587171 LEMD3Q9Y2U8 911 aa16.72■□□□□ 0.27
H3F3B-205ENST00000587171 ANKRD18BA2A2Z9 1011 aa16.71■□□□□ 0.27
H3F3B-205ENST00000587171 DEFB115Q30KQ5 88 aa16.71■□□□□ 0.27
H3F3B-205ENST00000587171 TBC1D10BQ4KMP7 808 aaPredicted RBP16.71■□□□□ 0.27
H3F3B-205ENST00000587171 RSBN1LQ6PCB5 846 aaPredicted RBP16.71■□□□□ 0.27
H3F3B-205ENST00000587171 SLC4A10Q6U841 1118 aa16.71■□□□□ 0.27
H3F3B-205ENST00000587171 MRPL50Q8N5N7 158 aaKnown RBP16.71■□□□□ 0.27
H3F3B-205ENST00000587171 AGBL3Q8NEM8 1001 aa16.71■□□□□ 0.27
H3F3B-205ENST00000587171 SRCIN1Q9C0H9 1055 aa16.71■□□□□ 0.27
H3F3B-205ENST00000587171 ANKRD2Q9GZV1 360 aa16.71■□□□□ 0.27
H3F3B-205ENST00000587171 ABT1Q9ULW3 272 aaKnown RBP16.71■□□□□ 0.27
H3F3B-205ENST00000587171 IFIT5Q13325 482 aaKnown RBP16.7■□□□□ 0.26
H3F3B-205ENST00000587171 EPHA10Q5JZY3 1008 aa16.7■□□□□ 0.26
H3F3B-205ENST00000587171 IFFO2Q5TF58 517 aa16.7■□□□□ 0.26
H3F3B-205ENST00000587171 CDC37L1Q7L3B6 337 aa16.7■□□□□ 0.26
H3F3B-205ENST00000587171 CDCA7LQ96GN5 454 aa16.7■□□□□ 0.26
H3F3B-205ENST00000587171 GMLQ99445 158 aa16.7■□□□□ 0.26
H3F3B-205ENST00000587171 C9orf78Q9NZ63 289 aaPredicted RBP16.7■□□□□ 0.26
H3F3B-205ENST00000587171 THSD7BQ9C0I4 1608 aa16.7■□□□□ 0.26
H3F3B-205ENST00000587171 ZNF804BA4D1E1 1349 aa16.7■□□□□ 0.26
H3F3B-205ENST00000587171 PTPRCP08575 1304 aa16.7■□□□□ 0.26
H3F3B-205ENST00000587171 USP17L3A6NCW0 530 aa16.69■□□□□ 0.26
H3F3B-205ENST00000587171 USP17L4A6NCW7 530 aa16.69■□□□□ 0.26
H3F3B-205ENST00000587171 ZNF280AP59817 542 aaPredicted RBP16.69■□□□□ 0.26
H3F3B-205ENST00000587171 CHRNDQ07001 517 aa16.69■□□□□ 0.26
H3F3B-205ENST00000587171 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
H3F3B-205ENST00000587171 USP17L1Q7RTZ2 530 aa16.69■□□□□ 0.26
H3F3B-205ENST00000587171 TXNRD3Q86VQ6 643 aa16.69■□□□□ 0.26
H3F3B-205ENST00000587171 TRMT2AQ8IZ69 625 aaKnown RBP16.69■□□□□ 0.26
H3F3B-205ENST00000587171 SSH1Q8WYL5 1049 aa16.69■□□□□ 0.26
H3F3B-205ENST00000587171 COA1Q9GZY4 146 aa16.69■□□□□ 0.26
H3F3B-205ENST00000587171 TLL2Q9Y6L7 1015 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms