RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 DBF4Q9UBU7 674 aaPredicted RBP18.45■□□□□ 0.54
CXXC1-208ENST00000587170 TRIM35Q9UPQ4 493 aa18.45■□□□□ 0.54
CXXC1-208ENST00000587170 A0A1B0GUL6 1792 aa18.45■□□□□ 0.54
CXXC1-208ENST00000587170 ADM5C9JUS6 153 aa18.44■□□□□ 0.54
CXXC1-208ENST00000587170 HDGFL1Q5TGJ6 251 aa18.44■□□□□ 0.54
CXXC1-208ENST00000587170 TBC1D16Q8TBP0 767 aa18.44■□□□□ 0.54
CXXC1-208ENST00000587170 CCDC102AQ96A19 550 aa18.44■□□□□ 0.54
CXXC1-208ENST00000587170 EYA3Q99504 573 aa18.44■□□□□ 0.54
CXXC1-208ENST00000587170 KCNQ5Q9NR82 932 aa18.44■□□□□ 0.54
CXXC1-208ENST00000587170 CACNA1FO60840 1977 aa18.43■□□□□ 0.54
CXXC1-208ENST00000587170 VIL1P09327 827 aaKnown RBP18.43■□□□□ 0.54
CXXC1-208ENST00000587170 KIF4BQ2VIQ3 1234 aa18.43■□□□□ 0.54
CXXC1-208ENST00000587170 C2orf69Q8N8R5 385 aa18.43■□□□□ 0.54
CXXC1-208ENST00000587170 DCPSQ96C86 337 aaKnown RBP18.43■□□□□ 0.54
CXXC1-208ENST00000587170 ATP5J2-PTCD1G3V325 749 aa18.42■□□□□ 0.54
CXXC1-208ENST00000587170 C6orf229H3BNL8 230 aa18.42■□□□□ 0.54
CXXC1-208ENST00000587170 RIMBP2O15034 1052 aa18.42■□□□□ 0.54
CXXC1-208ENST00000587170 SLC10A3P09131 477 aa18.42■□□□□ 0.54
CXXC1-208ENST00000587170 HYPKQ9NX55 129 aa18.42■□□□□ 0.54
CXXC1-208ENST00000587170 ZNF280AP59817 542 aaPredicted RBP18.41■□□□□ 0.54
CXXC1-208ENST00000587170 RPS8P62241 208 aaKnown RBP18.41■□□□□ 0.54
CXXC1-208ENST00000587170 GGA3Q9NZ52 723 aa18.41■□□□□ 0.54
CXXC1-208ENST00000587170 IRS4O14654 1257 aaPredicted RBP18.4■□□□□ 0.54
CXXC1-208ENST00000587170 ZNF157P51786 506 aaPredicted RBP18.4■□□□□ 0.54
CXXC1-208ENST00000587170 KIF23Q02241 960 aaPredicted RBP18.4■□□□□ 0.54
CXXC1-208ENST00000587170 DOK7Q18PE1 504 aa18.4■□□□□ 0.54
CXXC1-208ENST00000587170 ZNF428Q96B54 188 aa18.4■□□□□ 0.54
CXXC1-208ENST00000587170 CENPFP49454 3210 aa18.4■□□□□ 0.54
CXXC1-208ENST00000587170 MYBBP1AQ9BQG0 1328 aaKnown RBP18.4■□□□□ 0.54
CXXC1-208ENST00000587170 SULF1Q8IWU6 871 aa18.39■□□□□ 0.53
CXXC1-208ENST00000587170 ZBTB38Q8NAP3 1195 aaPredicted RBP18.39■□□□□ 0.53
CXXC1-208ENST00000587170 AGBL3Q8NEM8 1001 aa18.39■□□□□ 0.53
CXXC1-208ENST00000587170 RUNDC1Q96C34 613 aa18.39■□□□□ 0.53
CXXC1-208ENST00000587170 CDCA5Q96FF9 252 aa18.39■□□□□ 0.53
CXXC1-208ENST00000587170 CFAP44Q96MT7 982 aa18.39■□□□□ 0.53
CXXC1-208ENST00000587170 RNF186Q9NXI6 227 aa18.39■□□□□ 0.53
CXXC1-208ENST00000587170 ASTN2O75129 1339 aaPredicted RBP18.39■□□□□ 0.53
CXXC1-208ENST00000587170 PITPNM2Q9BZ72 1349 aa18.39■□□□□ 0.53
CXXC1-208ENST00000587170 RBBP6Q7Z6E9 1792 aaKnown RBP18.39■□□□□ 0.53
CXXC1-208ENST00000587170 CCDC146Q8IYE0 955 aa18.38■□□□□ 0.53
CXXC1-208ENST00000587170 GMLQ99445 158 aa18.38■□□□□ 0.53
CXXC1-208ENST00000587170 MKI67P46013 3256 aaKnown RBP18.37■□□□□ 0.53
CXXC1-208ENST00000587170 UFL1O94874 794 aa18.37■□□□□ 0.53
CXXC1-208ENST00000587170 HSP90B1P14625 803 aaKnown RBP18.37■□□□□ 0.53
CXXC1-208ENST00000587170 FKBP1BP68106 108 aa18.37■□□□□ 0.53
CXXC1-208ENST00000587170 NEUROD2Q15784 382 aa18.37■□□□□ 0.53
CXXC1-208ENST00000587170 DUSP27Q5VZP5 1158 aa18.37■□□□□ 0.53
CXXC1-208ENST00000587170 RSBN1LQ6PCB5 846 aaPredicted RBP18.37■□□□□ 0.53
CXXC1-208ENST00000587170 RASAL3Q86YV0 1011 aa18.37■□□□□ 0.53
CXXC1-208ENST00000587170 REM2Q8IYK8 340 aaPredicted RBP18.37■□□□□ 0.53
CXXC1-208ENST00000587170 CSRNP1Q96S65 589 aa18.37■□□□□ 0.53
CXXC1-208ENST00000587170 ZC3H12CQ9C0D7 883 aaKnown RBP18.37■□□□□ 0.53
CXXC1-208ENST00000587170 SEC31BQ9NQW1 1179 aa18.37■□□□□ 0.53
CXXC1-208ENST00000587170 TRPA1O75762 1119 aa18.36■□□□□ 0.53
CXXC1-208ENST00000587170 ZNF853P0CG23 659 aa18.36■□□□□ 0.53
CXXC1-208ENST00000587170 RTL5Q5HYW3 569 aaPredicted RBP18.36■□□□□ 0.53
CXXC1-208ENST00000587170 RBM26Q5T8P6 1007 aaKnown RBP18.36■□□□□ 0.53
CXXC1-208ENST00000587170 PCDH10Q9P2E7 1040 aa18.36■□□□□ 0.53
CXXC1-208ENST00000587170 GGA1Q9UJY5 639 aa18.36■□□□□ 0.53
CXXC1-208ENST00000587170 LAS1LQ9Y4W2 734 aaKnown RBP18.36■□□□□ 0.53
CXXC1-208ENST00000587170 XDHP47989 1333 aa18.35■□□□□ 0.53
CXXC1-208ENST00000587170 PCCAP05165 728 aaPredicted RBP18.35■□□□□ 0.53
CXXC1-208ENST00000587170 MBIPQ9NS73 344 aa18.35■□□□□ 0.53
CXXC1-208ENST00000587170 GOLGA2Q08379 1002 aa18.34■□□□□ 0.53
CXXC1-208ENST00000587170 CCDC152Q4G0S7 254 aa18.34■□□□□ 0.53
CXXC1-208ENST00000587170 ANGEL2Q5VTE6 544 aaKnown RBP18.34■□□□□ 0.53
CXXC1-208ENST00000587170 CCDC191Q8NCU4 936 aa18.34■□□□□ 0.53
CXXC1-208ENST00000587170 ANKIB1Q9P2G1 1089 aa18.34■□□□□ 0.53
CXXC1-208ENST00000587170 MED23Q9ULK4 1368 aa18.33■□□□□ 0.53
CXXC1-208ENST00000587170 BRCA2P51587 3418 aa18.33■□□□□ 0.52
CXXC1-208ENST00000587170 SCARF1Q14162 830 aa18.33■□□□□ 0.52
CXXC1-208ENST00000587170 CTU1Q7Z7A3 348 aaKnown RBP18.33■□□□□ 0.52
CXXC1-208ENST00000587170 PDE8AO60658 829 aa18.32■□□□□ 0.52
CXXC1-208ENST00000587170 RIC3Q7Z5B4 369 aa18.32■□□□□ 0.52
CXXC1-208ENST00000587170 PHAXQ9H814 394 aaKnown RBP18.32■□□□□ 0.52
CXXC1-208ENST00000587170 MYOZ2Q9NPC6 264 aa18.32■□□□□ 0.52
CXXC1-208ENST00000587170 USP17L8P0C7I0 530 aa18.31■□□□□ 0.52
CXXC1-208ENST00000587170 PODNQ7Z5L7 613 aa18.31■□□□□ 0.52
CXXC1-208ENST00000587170 IFT57Q9NWB7 429 aa18.31■□□□□ 0.52
CXXC1-208ENST00000587170 OTOFQ9HC10 1997 aa18.3■□□□□ 0.52
CXXC1-208ENST00000587170 ARAP2Q8WZ64 1704 aa18.3■□□□□ 0.52
CXXC1-208ENST00000587170 USP17L3A6NCW0 530 aa18.3■□□□□ 0.52
CXXC1-208ENST00000587170 USP17L4A6NCW7 530 aa18.3■□□□□ 0.52
CXXC1-208ENST00000587170 SOX10P56693 466 aa18.3■□□□□ 0.52
CXXC1-208ENST00000587170 WDR43Q15061 677 aaKnown RBP eCLIP18.3■□□□□ 0.52
CXXC1-208ENST00000587170 NOM1Q5C9Z4 860 aaKnown RBP18.3■□□□□ 0.52
CXXC1-208ENST00000587170 USP17L1Q7RTZ2 530 aa18.3■□□□□ 0.52
CXXC1-208ENST00000587170 MYD88Q99836 296 aa18.3■□□□□ 0.52
CXXC1-208ENST00000587170 CWC25Q9NXE8 425 aaPredicted RBP18.3■□□□□ 0.52
CXXC1-208ENST00000587170 ADAMTS8Q9UP79 889 aa18.3■□□□□ 0.52
CXXC1-208ENST00000587170 G3V3G9 751 aa18.29■□□□□ 0.52
CXXC1-208ENST00000587170 ATP2B4P23634 1241 aa18.29■□□□□ 0.52
CXXC1-208ENST00000587170 DCAF8Q5TAQ9 597 aa18.29■□□□□ 0.52
CXXC1-208ENST00000587170 METTL22Q9BUU2 404 aaPredicted RBP18.29■□□□□ 0.52
CXXC1-208ENST00000587170 ANKRD18AQ8IVF6 992 aa18.28■□□□□ 0.52
CXXC1-208ENST00000587170 COL1A1P02452 1464 aaPredicted RBP18.27■□□□□ 0.52
CXXC1-208ENST00000587170 MYO3BQ8WXR4 1341 aa18.27■□□□□ 0.52
CXXC1-208ENST00000587170 CTSWP56202 376 aa18.27■□□□□ 0.52
CXXC1-208ENST00000587170 GNAI1P63096 354 aa18.27■□□□□ 0.52
CXXC1-208ENST00000587170 PKN2Q16513 984 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms