RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 MAP3K2Q9Y2U5 619 aa18.06■□□□□ 0.48
ATG4D-206ENST00000586863 SPEF2Q9C093 1822 aa18.06■□□□□ 0.48
ATG4D-206ENST00000586863 PSME4Q14997 1843 aa18.05■□□□□ 0.48
ATG4D-206ENST00000586863 H7C1D1 291 aa18.05■□□□□ 0.48
ATG4D-206ENST00000586863 PDE8AO60658 829 aa18.05■□□□□ 0.48
ATG4D-206ENST00000586863 DDX58O95786 925 aaKnown RBP18.05■□□□□ 0.48
ATG4D-206ENST00000586863 HSPA8P11142 646 aaKnown RBP18.05■□□□□ 0.48
ATG4D-206ENST00000586863 MAP2K1Q02750 393 aaPredicted RBP18.05■□□□□ 0.48
ATG4D-206ENST00000586863 CCDC152Q4G0S7 254 aa18.05■□□□□ 0.48
ATG4D-206ENST00000586863 SAMD7Q7Z3H4 446 aa18.05■□□□□ 0.48
ATG4D-206ENST00000586863 DPF2Q92785 391 aa18.05■□□□□ 0.48
ATG4D-206ENST00000586863 EYA3Q99504 573 aa18.05■□□□□ 0.48
ATG4D-206ENST00000586863 PODXL2Q9NZ53 605 aa18.05■□□□□ 0.48
ATG4D-206ENST00000586863 UFL1O94874 794 aa18.04■□□□□ 0.48
ATG4D-206ENST00000586863 EGFRP00533 1210 aa18.04■□□□□ 0.48
ATG4D-206ENST00000586863 IGKV5-2P06315 115 aa18.04■□□□□ 0.48
ATG4D-206ENST00000586863 HSP90B1P14625 803 aaKnown RBP18.04■□□□□ 0.48
ATG4D-206ENST00000586863 ECE1P42892 770 aa18.04■□□□□ 0.48
ATG4D-206ENST00000586863 SAPCD2Q86UD0 394 aa18.04■□□□□ 0.48
ATG4D-206ENST00000586863 PI4KAP2A4QPH2 592 aa18.03■□□□□ 0.48
ATG4D-206ENST00000586863 CCDC27Q2M243 656 aa18.03■□□□□ 0.48
ATG4D-206ENST00000586863 TBC1D10BQ4KMP7 808 aaPredicted RBP18.03■□□□□ 0.48
ATG4D-206ENST00000586863 WWC1Q8IX03 1113 aa18.03■□□□□ 0.48
ATG4D-206ENST00000586863 PI4KAP1Q8N8J0 262 aa18.03■□□□□ 0.48
ATG4D-206ENST00000586863 CHMP4AQ9BY43 222 aa18.03■□□□□ 0.48
ATG4D-206ENST00000586863 ZNF408Q9H9D4 720 aa18.03■□□□□ 0.48
ATG4D-206ENST00000586863 ANKIB1Q9P2G1 1089 aa18.03■□□□□ 0.48
ATG4D-206ENST00000586863 AOC2O75106 756 aa18.02■□□□□ 0.48
ATG4D-206ENST00000586863 DLK2Q6UY11 383 aa18.02■□□□□ 0.48
ATG4D-206ENST00000586863 KSR2Q6VAB6 950 aa18.02■□□□□ 0.48
ATG4D-206ENST00000586863 CDC37L1Q7L3B6 337 aa18.02■□□□□ 0.48
ATG4D-206ENST00000586863 GGA1Q9UJY5 639 aa18.02■□□□□ 0.48
ATG4D-206ENST00000586863 CACNA1FO60840 1977 aa18.01■□□□□ 0.47
ATG4D-206ENST00000586863 RPS12P25398 132 aaKnown RBP18.01■□□□□ 0.47
ATG4D-206ENST00000586863 CTSWP56202 376 aa18.01■□□□□ 0.47
ATG4D-206ENST00000586863 G2E3Q7L622 706 aa18.01■□□□□ 0.47
ATG4D-206ENST00000586863 USP48Q86UV5 1035 aa18.01■□□□□ 0.47
ATG4D-206ENST00000586863 STK31Q9BXU1 1019 aa18.01■□□□□ 0.47
ATG4D-206ENST00000586863 ZC3H12CQ9C0D7 883 aaKnown RBP18.01■□□□□ 0.47
ATG4D-206ENST00000586863 CWF19L2Q2TBE0 894 aaKnown RBP18■□□□□ 0.47
ATG4D-206ENST00000586863 TWISTNBQ3B726 338 aaPredicted RBP18■□□□□ 0.47
ATG4D-206ENST00000586863 ANKRD18AQ8IVF6 992 aa18■□□□□ 0.47
ATG4D-206ENST00000586863 XDHP47989 1333 aa17.99■□□□□ 0.47
ATG4D-206ENST00000586863 VIL1P09327 827 aaKnown RBP17.99■□□□□ 0.47
ATG4D-206ENST00000586863 RBM26Q5T8P6 1007 aaKnown RBP17.99■□□□□ 0.47
ATG4D-206ENST00000586863 HHIPL1Q96JK4 782 aa17.99■□□□□ 0.47
ATG4D-206ENST00000586863 IL16Q14005 1332 aa17.98■□□□□ 0.47
ATG4D-206ENST00000586863 NEURL1BA8MQ27 555 aa17.98■□□□□ 0.47
ATG4D-206ENST00000586863 ADM5C9JUS6 153 aa17.98■□□□□ 0.47
ATG4D-206ENST00000586863 KIF4BQ2VIQ3 1234 aa17.98■□□□□ 0.47
ATG4D-206ENST00000586863 KRT26Q7Z3Y9 468 aa17.98■□□□□ 0.47
ATG4D-206ENST00000586863 TTLL11Q8NHH1 800 aa17.98■□□□□ 0.47
ATG4D-206ENST00000586863 GREM2Q9H772 168 aa17.98■□□□□ 0.47
ATG4D-206ENST00000586863 ZNF646O15015 1829 aaPredicted RBP17.98■□□□□ 0.47
ATG4D-206ENST00000586863 ZNF609O15014 1411 aa17.98■□□□□ 0.47
ATG4D-206ENST00000586863 WTIPA6NIX2 430 aaPredicted RBP17.97■□□□□ 0.47
ATG4D-206ENST00000586863 G3V3G9 751 aa17.97■□□□□ 0.47
ATG4D-206ENST00000586863 MAP2K2P36507 400 aa17.97■□□□□ 0.47
ATG4D-206ENST00000586863 NEXNQ0ZGT2 675 aa17.97■□□□□ 0.47
ATG4D-206ENST00000586863 DCAF8Q5TAQ9 597 aa17.97■□□□□ 0.47
ATG4D-206ENST00000586863 CDC5LQ99459 802 aaKnown RBP17.97■□□□□ 0.47
ATG4D-206ENST00000586863 BEGAINQ9BUH8 593 aa17.97■□□□□ 0.47
ATG4D-206ENST00000586863 MRS2Q9HD23 443 aa17.97■□□□□ 0.47
ATG4D-206ENST00000586863 TSKSQ9UJT2 592 aa17.97■□□□□ 0.47
ATG4D-206ENST00000586863 CASP8AP2Q9UKL3 1982 aa17.97■□□□□ 0.47
ATG4D-206ENST00000586863 ASTN2O75129 1339 aaPredicted RBP17.97■□□□□ 0.47
ATG4D-206ENST00000586863 FANCIQ9NVI1 1328 aa17.97■□□□□ 0.47
ATG4D-206ENST00000586863 SLC4A2P04920 1241 aa17.96■□□□□ 0.47
ATG4D-206ENST00000586863 RSBN1LQ6PCB5 846 aaPredicted RBP17.96■□□□□ 0.47
ATG4D-206ENST00000586863 UBE3BQ7Z3V4 1068 aa17.96■□□□□ 0.47
ATG4D-206ENST00000586863 ATP2B4P23634 1241 aa17.95■□□□□ 0.46
ATG4D-206ENST00000586863 HUNKP57058 714 aa17.95■□□□□ 0.46
ATG4D-206ENST00000586863 FLIIQ13045 1269 aa17.95■□□□□ 0.46
ATG4D-206ENST00000586863 NCBP3Q53F19 620 aaKnown RBP17.95■□□□□ 0.46
ATG4D-206ENST00000586863 DCPSQ96C86 337 aaKnown RBP17.95■□□□□ 0.46
ATG4D-206ENST00000586863 GGA3Q9NZ52 723 aa17.95■□□□□ 0.46
ATG4D-206ENST00000586863 H7C1W4 665 aa17.94■□□□□ 0.46
ATG4D-206ENST00000586863 ZNF280AP59817 542 aaPredicted RBP17.94■□□□□ 0.46
ATG4D-206ENST00000586863 AGBL3Q8NEM8 1001 aa17.94■□□□□ 0.46
ATG4D-206ENST00000586863 ZIC5Q96T25 663 aa17.94■□□□□ 0.46
ATG4D-206ENST00000586863 BSDC1Q9NW68 430 aaPredicted RBP17.94■□□□□ 0.46
ATG4D-206ENST00000586863 MINPP1Q9UNW1 487 aa17.94■□□□□ 0.46
ATG4D-206ENST00000586863 SALL2Q9Y467 1007 aaPredicted RBP17.94■□□□□ 0.46
ATG4D-206ENST00000586863 MED23Q9ULK4 1368 aa17.93■□□□□ 0.46
ATG4D-206ENST00000586863 BRPF1P55201 1214 aaPredicted RBP17.93■□□□□ 0.46
ATG4D-206ENST00000586863 GCKRQ14397 625 aa17.93■□□□□ 0.46
ATG4D-206ENST00000586863 GMLQ99445 158 aa17.93■□□□□ 0.46
ATG4D-206ENST00000586863 GBA2Q9HCG7 927 aaPredicted RBP17.93■□□□□ 0.46
ATG4D-206ENST00000586863 CASP7P55210 303 aa17.92■□□□□ 0.46
ATG4D-206ENST00000586863 FKBP5Q13451 457 aaPredicted RBP17.92■□□□□ 0.46
ATG4D-206ENST00000586863 FAM161AQ3B820 660 aa17.92■□□□□ 0.46
ATG4D-206ENST00000586863 DNAAF4Q8WXU2 420 aa17.92■□□□□ 0.46
ATG4D-206ENST00000586863 PLA2G12BQ9BX93 195 aa17.92■□□□□ 0.46
ATG4D-206ENST00000586863 USP17L3A6NCW0 530 aa17.91■□□□□ 0.46
ATG4D-206ENST00000586863 USP17L4A6NCW7 530 aa17.91■□□□□ 0.46
ATG4D-206ENST00000586863 CCT4P50991 539 aaKnown RBP17.91■□□□□ 0.46
ATG4D-206ENST00000586863 NOGQ13253 232 aa17.91■□□□□ 0.46
ATG4D-206ENST00000586863 SCARF1Q14162 830 aa17.91■□□□□ 0.46
ATG4D-206ENST00000586863 ANGEL2Q5VTE6 544 aaKnown RBP17.91■□□□□ 0.46
ATG4D-206ENST00000586863 USP17L1Q7RTZ2 530 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms