RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 C1orf115Q9H7X2 142 aa23.88■■□□□ 1.41
DDX39A-204ENST00000586558 CNNM1Q9NRU3 951 aa23.88■■□□□ 1.41
DDX39A-204ENST00000586558 FBXO3Q9UK99 471 aa23.88■■□□□ 1.41
DDX39A-204ENST00000586558 PTPN12Q05209 780 aaKnown RBP23.87■■□□□ 1.41
DDX39A-204ENST00000586558 SLC51AQ86UW1 340 aa23.87■■□□□ 1.41
DDX39A-204ENST00000586558 ANKIB1Q9P2G1 1089 aa23.87■■□□□ 1.41
DDX39A-204ENST00000586558 NSFL1CQ9UNZ2 370 aaKnown RBP23.87■■□□□ 1.41
DDX39A-204ENST00000586558 LMNB1P20700 586 aa23.86■■□□□ 1.41
DDX39A-204ENST00000586558 GPSM2P81274 684 aa23.86■■□□□ 1.41
DDX39A-204ENST00000586558 ATP8B2P98198 1209 aa23.86■■□□□ 1.41
DDX39A-204ENST00000586558 RASSF7Q02833 373 aa23.86■■□□□ 1.41
DDX39A-204ENST00000586558 COPRSQ9NQ92 184 aa23.86■■□□□ 1.41
DDX39A-204ENST00000586558 SPEF2Q9C093 1822 aa23.85■■□□□ 1.41
DDX39A-204ENST00000586558 AAMPQ13685 434 aa23.85■■□□□ 1.41
DDX39A-204ENST00000586558 CEP85Q6P2H3 762 aa23.85■■□□□ 1.41
DDX39A-204ENST00000586558 RPAP2Q8IXW5 612 aaPredicted RBP23.85■■□□□ 1.41
DDX39A-204ENST00000586558 CRBNQ96SW2 442 aa23.85■■□□□ 1.41
DDX39A-204ENST00000586558 VPS33BQ9H267 617 aa23.85■■□□□ 1.41
DDX39A-204ENST00000586558 LTBP1Q14766 1721 aa23.84■■□□□ 1.41
DDX39A-204ENST00000586558 DUOX1Q9NRD9 1551 aa23.84■■□□□ 1.41
DDX39A-204ENST00000586558 PNMA6EA0A0J9YXQ4 647 aa23.84■■□□□ 1.41
DDX39A-204ENST00000586558 CIAO1O76071 339 aa23.84■■□□□ 1.41
DDX39A-204ENST00000586558 CHRNDQ07001 517 aa23.84■■□□□ 1.41
DDX39A-204ENST00000586558 POLA2Q14181 598 aa23.84■■□□□ 1.41
DDX39A-204ENST00000586558 KLHDC4Q8TBB5 520 aa23.84■■□□□ 1.41
DDX39A-204ENST00000586558 SSH3Q8TE77 659 aa23.84■■□□□ 1.41
DDX39A-204ENST00000586558 GGA1Q9UJY5 639 aa23.84■■□□□ 1.41
DDX39A-204ENST00000586558 RIPOR2Q9Y4F9 1068 aa23.84■■□□□ 1.41
DDX39A-204ENST00000586558 MROH5Q6ZUA9 1318 aa23.84■■□□□ 1.41
DDX39A-204ENST00000586558 EYA2O00167 538 aa23.83■■□□□ 1.41
DDX39A-204ENST00000586558 PUS3Q9BZE2 481 aaKnown RBP23.83■■□□□ 1.41
DDX39A-204ENST00000586558 UFL1O94874 794 aa23.82■■□□□ 1.4
DDX39A-204ENST00000586558 ATP2B4P23634 1241 aa23.82■■□□□ 1.4
DDX39A-204ENST00000586558 TBC1D16Q8TBP0 767 aa23.82■■□□□ 1.4
DDX39A-204ENST00000586558 ZNF277Q9NRM2 450 aaPredicted RBP23.82■■□□□ 1.4
DDX39A-204ENST00000586558 LEMD3Q9Y2U8 911 aa23.82■■□□□ 1.4
DDX39A-204ENST00000586558 C6orf229H3BNL8 230 aa23.81■■□□□ 1.4
DDX39A-204ENST00000586558 HMMRO75330 724 aa23.81■■□□□ 1.4
DDX39A-204ENST00000586558 IARSP41252 1262 aaKnown RBP23.81■■□□□ 1.4
DDX39A-204ENST00000586558 LRRC24Q50LG9 513 aa23.81■■□□□ 1.4
DDX39A-204ENST00000586558 EYA3Q99504 573 aa23.81■■□□□ 1.4
DDX39A-204ENST00000586558 POLLQ9UGP5 575 aa23.81■■□□□ 1.4
DDX39A-204ENST00000586558 IL15P40933 162 aaPredicted RBP23.8■■□□□ 1.4
DDX39A-204ENST00000586558 PRELPP51888 382 aa23.8■■□□□ 1.4
DDX39A-204ENST00000586558 C9orf131Q5VYM1 1079 aa23.8■■□□□ 1.4
DDX39A-204ENST00000586558 SIL1Q9H173 461 aa23.8■■□□□ 1.4
DDX39A-204ENST00000586558 RNF181Q9P0P0 153 aa23.8■■□□□ 1.4
DDX39A-204ENST00000586558 PA2G4Q9UQ80 394 aaKnown RBP23.8■■□□□ 1.4
DDX39A-204ENST00000586558 ZC3H4Q9UPT8 1303 aaKnown RBP23.8■■□□□ 1.4
DDX39A-204ENST00000586558 KIAA2012Q0VF49 1180 aa23.79■■□□□ 1.4
DDX39A-204ENST00000586558 METTL24Q5JXM2 366 aa23.79■■□□□ 1.4
DDX39A-204ENST00000586558 ATG9AQ7Z3C6 839 aa23.79■■□□□ 1.4
DDX39A-204ENST00000586558 PPIP5K2O43314 1243 aa23.78■■□□□ 1.4
DDX39A-204ENST00000586558 KCNJ4P48050 445 aa23.78■■□□□ 1.4
DDX39A-204ENST00000586558 WASHC4Q2M389 1173 aa23.78■■□□□ 1.4
DDX39A-204ENST00000586558 ZNF804BA4D1E1 1349 aa23.78■■□□□ 1.4
DDX39A-204ENST00000586558 LARGE2Q8N3Y3 721 aa23.77■■□□□ 1.4
DDX39A-204ENST00000586558 HELBQ8NG08 1087 aaPredicted RBP23.77■■□□□ 1.4
DDX39A-204ENST00000586558 MED23Q9ULK4 1368 aa23.77■■□□□ 1.4
DDX39A-204ENST00000586558 TAF5LO75529 589 aa23.76■■□□□ 1.39
DDX39A-204ENST00000586558 PDE8BO95263 885 aa23.76■■□□□ 1.39
DDX39A-204ENST00000586558 G3BP1Q13283 466 aaKnown RBP eCLIP23.76■■□□□ 1.39
DDX39A-204ENST00000586558 UBE4AQ14139 1066 aa23.76■■□□□ 1.39
DDX39A-204ENST00000586558 AOC3Q16853 763 aa23.76■■□□□ 1.39
DDX39A-204ENST00000586558 SIRT2Q8IXJ6 389 aa23.76■■□□□ 1.39
DDX39A-204ENST00000586558 VGLL2Q8N8G2 317 aa23.76■■□□□ 1.39
DDX39A-204ENST00000586558 JDP2Q8WYK2 163 aa23.76■■□□□ 1.39
DDX39A-204ENST00000586558 ZC3H12CQ9C0D7 883 aaKnown RBP23.76■■□□□ 1.39
DDX39A-204ENST00000586558 NOP58Q9Y2X3 529 aaKnown RBP23.76■■□□□ 1.39
DDX39A-204ENST00000586558 SBF1O95248 1867 aa23.76■■□□□ 1.39
DDX39A-204ENST00000586558 UTRNP46939 3433 aa23.76■■□□□ 1.39
DDX39A-204ENST00000586558 CHD4Q14839 1912 aa23.75■■□□□ 1.39
DDX39A-204ENST00000586558 CEP126Q9P2H0 1117 aa23.75■■□□□ 1.39
DDX39A-204ENST00000586558 A0A1B0GUL6 1792 aa23.75■■□□□ 1.39
DDX39A-204ENST00000586558 HSP90AB4PQ58FF6 505 aa23.74■■□□□ 1.39
DDX39A-204ENST00000586558 C15orf52Q6ZUT6 534 aaKnown RBP23.74■■□□□ 1.39
DDX39A-204ENST00000586558 NIM1KQ8IY84 436 aa23.74■■□□□ 1.39
DDX39A-204ENST00000586558 EXOC6Q8TAG9 804 aa23.74■■□□□ 1.39
DDX39A-204ENST00000586558 SURF6O75683 361 aaKnown RBP23.73■■□□□ 1.39
DDX39A-204ENST00000586558 PUM3Q15397 648 aaKnown RBP23.73■■□□□ 1.39
DDX39A-204ENST00000586558 OS9Q13438 667 aaPredicted RBP23.72■■□□□ 1.39
DDX39A-204ENST00000586558 GPR101Q96P66 508 aaPredicted RBP23.72■■□□□ 1.39
DDX39A-204ENST00000586558 DICER1Q9UPY3 1922 aaKnown RBP23.71■■□□□ 1.39
DDX39A-204ENST00000586558 TIAM2Q8IVF5 1701 aa23.71■■□□□ 1.39
DDX39A-204ENST00000586558 WTIPA6NIX2 430 aaPredicted RBP23.71■■□□□ 1.39
DDX39A-204ENST00000586558 RIMBP2O15034 1052 aa23.71■■□□□ 1.39
DDX39A-204ENST00000586558 ERC1Q8IUD2 1116 aa23.71■■□□□ 1.39
DDX39A-204ENST00000586558 PCDHB15Q9Y5E8 787 aa23.71■■□□□ 1.39
DDX39A-204ENST00000586558 COL4A5P29400 1685 aa23.7■■□□□ 1.39
DDX39A-204ENST00000586558 IRS2Q9Y4H2 1338 aa23.7■■□□□ 1.38
DDX39A-204ENST00000586558 LPIN2Q92539 896 aa23.7■■□□□ 1.38
DDX39A-204ENST00000586558 ZNRF3Q9ULT6 936 aa23.7■■□□□ 1.38
DDX39A-204ENST00000586558 AKAP2Q9Y2D5 859 aa23.7■■□□□ 1.38
DDX39A-204ENST00000586558 G3V3G9 751 aa23.69■■□□□ 1.38
DDX39A-204ENST00000586558 FZD9O00144 591 aa23.69■■□□□ 1.38
DDX39A-204ENST00000586558 SNAP23O00161 211 aa23.69■■□□□ 1.38
DDX39A-204ENST00000586558 IFIT1P09914 478 aaKnown RBP23.69■■□□□ 1.38
DDX39A-204ENST00000586558 FGFR2P21802 821 aa23.69■■□□□ 1.38
DDX39A-204ENST00000586558 TFCP2Q12800 502 aa23.69■■□□□ 1.38
DDX39A-204ENST00000586558 DCAF8Q5TAQ9 597 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms