RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 CHMP4BP1P59074 171 aa9.05□□□□□ -0.96
TPM4-203ENST00000586193 RASA3Q14644 834 aa9.05□□□□□ -0.96
TPM4-203ENST00000586193 FBXL19Q6PCT2 694 aa9.05□□□□□ -0.96
TPM4-203ENST00000586193 ABI2Q9NYB9 513 aaPredicted RBP9.05□□□□□ -0.96
TPM4-203ENST00000586193 R3HCC1Q9Y3T6 440 aaKnown RBP9.05□□□□□ -0.96
TPM4-203ENST00000586193 A0A1W2PP55 124 aa9.04□□□□□ -0.96
TPM4-203ENST00000586193 DNAJC6O75061 913 aa9.04□□□□□ -0.96
TPM4-203ENST00000586193 XYLBO75191 536 aa9.04□□□□□ -0.96
TPM4-203ENST00000586193 FBXO24O75426 580 aa9.04□□□□□ -0.96
TPM4-203ENST00000586193 CES1P23141 567 aa9.04□□□□□ -0.96
TPM4-203ENST00000586193 GRNP28799 593 aaKnown RBP9.04□□□□□ -0.96
TPM4-203ENST00000586193 FAM160A1Q05DH4 1040 aa9.04□□□□□ -0.96
TPM4-203ENST00000586193 CTC1Q2NKJ3 1217 aa9.04□□□□□ -0.96
TPM4-203ENST00000586193 KIAA0319Q5VV43 1072 aa9.04□□□□□ -0.96
TPM4-203ENST00000586193 LRRC69Q6ZNQ3 347 aa9.04□□□□□ -0.96
TPM4-203ENST00000586193 EMID1Q96A84 441 aaPredicted RBP9.04□□□□□ -0.96
TPM4-203ENST00000586193 NT5C1AQ9BXI3 368 aa9.04□□□□□ -0.96
TPM4-203ENST00000586193 KLF16Q9BXK1 252 aaPredicted RBP9.04□□□□□ -0.96
TPM4-203ENST00000586193 SPC25Q9HBM1 224 aa9.04□□□□□ -0.96
TPM4-203ENST00000586193 LATS2Q9NRM7 1088 aa9.04□□□□□ -0.96
TPM4-203ENST00000586193 TRAK1Q9UPV9 953 aa9.04□□□□□ -0.96
TPM4-203ENST00000586193 AKAP2Q9Y2D5 859 aa9.04□□□□□ -0.96
TPM4-203ENST00000586193 GPC6Q9Y625 555 aaPredicted RBP9.04□□□□□ -0.96
TPM4-203ENST00000586193 GPC1P35052 558 aa9.03□□□□□ -0.96
TPM4-203ENST00000586193 PLEKHG4Q58EX7 1191 aa9.03□□□□□ -0.96
TPM4-203ENST00000586193 PMEPA1Q969W9 287 aa9.03□□□□□ -0.96
TPM4-203ENST00000586193 KANSL2Q9H9L4 492 aa9.03□□□□□ -0.96
TPM4-203ENST00000586193 UBP1Q9NZI7 540 aa9.03□□□□□ -0.96
TPM4-203ENST00000586193 PRKAG3Q9UGI9 489 aa9.03□□□□□ -0.96
TPM4-203ENST00000586193 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.03□□□□□ -0.96
TPM4-203ENST00000586193 RNF144AP50876 292 aaPredicted RBP9.02□□□□□ -0.97
TPM4-203ENST00000586193 WDR4P57081 412 aaKnown RBP9.02□□□□□ -0.97
TPM4-203ENST00000586193 COL9A2Q14055 689 aaPredicted RBP9.02□□□□□ -0.97
TPM4-203ENST00000586193 TTC39BQ5VTQ0 682 aaPredicted RBP9.02□□□□□ -0.97
TPM4-203ENST00000586193 SH3TC2Q8TF17 1288 aa9.02□□□□□ -0.97
TPM4-203ENST00000586193 RHOVQ96L33 236 aa9.02□□□□□ -0.97
TPM4-203ENST00000586193 OXCT2Q9BYC2 517 aaPredicted RBP9.02□□□□□ -0.97
TPM4-203ENST00000586193 FANCLQ9NW38 375 aa9.02□□□□□ -0.97
TPM4-203ENST00000586193 TLR6Q9Y2C9 796 aa9.02□□□□□ -0.97
TPM4-203ENST00000586193 SUPT16HQ9Y5B9 1047 aaKnown RBP9.02□□□□□ -0.97
TPM4-203ENST00000586193 PPP1R12AO14974 1030 aaPredicted RBP9.01□□□□□ -0.97
TPM4-203ENST00000586193 ITGBL1O95965 494 aaPredicted RBP9.01□□□□□ -0.97
TPM4-203ENST00000586193 PF4P02776 101 aa9.01□□□□□ -0.97
TPM4-203ENST00000586193 CYP2E1P05181 493 aaPredicted RBP9.01□□□□□ -0.97
TPM4-203ENST00000586193 RLBP1P12271 317 aa9.01□□□□□ -0.97
TPM4-203ENST00000586193 GARTP22102 1010 aa9.01□□□□□ -0.97
TPM4-203ENST00000586193 VEGFBP49765 207 aa9.01□□□□□ -0.97
TPM4-203ENST00000586193 ARSJQ5FYB0 599 aaPredicted RBP9.01□□□□□ -0.97
TPM4-203ENST00000586193 PCNX4Q63HM2 1172 aa9.01□□□□□ -0.97
TPM4-203ENST00000586193 NLRP13Q86W25 1043 aa9.01□□□□□ -0.97
TPM4-203ENST00000586193 PHC3Q8NDX5 983 aa9.01□□□□□ -0.97
TPM4-203ENST00000586193 ZIC5Q96T25 663 aa9.01□□□□□ -0.97
TPM4-203ENST00000586193 INSM2Q96T92 566 aaPredicted RBP9.01□□□□□ -0.97
TPM4-203ENST00000586193 SRRTQ9BXP5 876 aaKnown RBP9.01□□□□□ -0.97
TPM4-203ENST00000586193 KCNQ5Q9NR82 932 aa9.01□□□□□ -0.97
TPM4-203ENST00000586193 KANSL3Q9P2N6 904 aa9.01□□□□□ -0.97
TPM4-203ENST00000586193 SMAD7O15105 426 aaKnown RBP9□□□□□ -0.97
TPM4-203ENST00000586193 GREM1O60565 184 aa9□□□□□ -0.97
TPM4-203ENST00000586193 CDC45O75419 566 aa9□□□□□ -0.97
TPM4-203ENST00000586193 PARNO95453 639 aaKnown RBP9□□□□□ -0.97
TPM4-203ENST00000586193 EPB42P16452 691 aa9□□□□□ -0.97
TPM4-203ENST00000586193 ATP4AP20648 1035 aa9□□□□□ -0.97
TPM4-203ENST00000586193 PEAR1Q5VY43 1037 aaPredicted RBP9□□□□□ -0.97
TPM4-203ENST00000586193 DTHD1Q6ZMT9 781 aa9□□□□□ -0.97
TPM4-203ENST00000586193 CCDC81Q6ZN84 652 aa9□□□□□ -0.97
TPM4-203ENST00000586193 LRP10Q7Z4F1 713 aa9□□□□□ -0.97
TPM4-203ENST00000586193 CERS3Q8IU89 383 aa9□□□□□ -0.97
TPM4-203ENST00000586193 PPM1HQ9ULR3 514 aa9□□□□□ -0.97
TPM4-203ENST00000586193 PPME1Q9Y570 386 aa9□□□□□ -0.97
TPM4-203ENST00000586193 SPATA31C2B4DYI2 1134 aa8.99□□□□□ -0.97
TPM4-203ENST00000586193 APOBRQ0VD83 1088 aa8.99□□□□□ -0.97
TPM4-203ENST00000586193 POU4F2Q12837 409 aa8.99□□□□□ -0.97
TPM4-203ENST00000586193 SNAP47Q5SQN1 464 aa8.99□□□□□ -0.97
TPM4-203ENST00000586193 TPTE2Q6XPS3 522 aa8.99□□□□□ -0.97
TPM4-203ENST00000586193 SV2BQ7L1I2 683 aa8.99□□□□□ -0.97
TPM4-203ENST00000586193 RPUSD2Q8IZ73 545 aaKnown RBP8.99□□□□□ -0.97
TPM4-203ENST00000586193 LILRB2Q8N423 598 aa8.99□□□□□ -0.97
TPM4-203ENST00000586193 GOLM1Q8NBJ4 401 aa8.99□□□□□ -0.97
TPM4-203ENST00000586193 NKD1Q969G9 470 aa8.99□□□□□ -0.97
TPM4-203ENST00000586193 CEP63Q96MT8 703 aa8.99□□□□□ -0.97
TPM4-203ENST00000586193 DNAJC7Q99615 494 aa8.99□□□□□ -0.97
TPM4-203ENST00000586193 SLKQ9H2G2 1235 aaPredicted RBP8.99□□□□□ -0.97
TPM4-203ENST00000586193 TMEM238LA0A1B0GVL6 79 aa8.98□□□□□ -0.97
TPM4-203ENST00000586193 EGFRP00533 1210 aa8.98□□□□□ -0.97
TPM4-203ENST00000586193 EDN3P14138 238 aa8.98□□□□□ -0.97
TPM4-203ENST00000586193 TIMP2P16035 220 aa8.98□□□□□ -0.97
TPM4-203ENST00000586193 LIG3P49916 1009 aa8.98□□□□□ -0.97
TPM4-203ENST00000586193 TYRO3Q06418 890 aa8.98□□□□□ -0.97
TPM4-203ENST00000586193 PRPF40BQ6NWY9 871 aaKnown RBP8.98□□□□□ -0.97
TPM4-203ENST00000586193 DHX37Q8IY37 1157 aaKnown RBP8.98□□□□□ -0.97
TPM4-203ENST00000586193 CELF2-AS1Q8N7Q2 184 aa8.98□□□□□ -0.97
TPM4-203ENST00000586193 SHDQ96IW2 340 aa8.98□□□□□ -0.97
TPM4-203ENST00000586193 ABCB6Q9NP58 842 aa8.98□□□□□ -0.97
TPM4-203ENST00000586193 POLMQ9NP87 494 aaPredicted RBP8.98□□□□□ -0.97
TPM4-203ENST00000586193 PRKAB1Q9Y478 270 aa8.98□□□□□ -0.97
TPM4-203ENST00000586193 ESYT3A0FGR9 886 aa8.97□□□□□ -0.97
TPM4-203ENST00000586193 CELA3AP09093 270 aa8.97□□□□□ -0.97
TPM4-203ENST00000586193 CRKP46108 304 aa8.97□□□□□ -0.97
TPM4-203ENST00000586193 CAMK2GQ13555 558 aaPredicted RBP8.97□□□□□ -0.97
TPM4-203ENST00000586193 ANKRD24Q8TF21 1146 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms