RNA–Protein interactions for RNA: ENST00000586057.5

TIMP2-204, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 1 (best) BASIC

Gene TIMP2, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-204ENST00000586057 C16orf45Q96MC5 204 aaPredicted RBP12.15□□□□□ -0.46
TIMP2-204ENST00000586057 CWC25Q9NXE8 425 aaPredicted RBP12.15□□□□□ -0.46
TIMP2-204ENST00000586057 HLFQ16534 295 aa12.15□□□□□ -0.46
TIMP2-204ENST00000586057 SPC24Q8NBT2 197 aa12.15□□□□□ -0.46
TIMP2-204ENST00000586057 FAM53CQ9NYF3 392 aa12.15□□□□□ -0.46
TIMP2-204ENST00000586057 THRAP3Q9Y2W1 955 aaKnown RBP12.15□□□□□ -0.46
TIMP2-204ENST00000586057 TNNT1P13805 278 aa12.15□□□□□ -0.47
TIMP2-204ENST00000586057 GTF2A1P52655 376 aaPredicted RBP12.15□□□□□ -0.47
TIMP2-204ENST00000586057 KMT5BQ4FZB7 885 aa12.15□□□□□ -0.47
TIMP2-204ENST00000586057 KIF1BPQ96EK5 621 aa12.15□□□□□ -0.47
TIMP2-204ENST00000586057 COL16A1Q07092 1604 aaPredicted RBP12.14□□□□□ -0.47
TIMP2-204ENST00000586057 CCDC183Q5T5S1 534 aa12.14□□□□□ -0.47
TIMP2-204ENST00000586057 TEX13AQ9BXU3 409 aaPredicted RBP12.14□□□□□ -0.47
TIMP2-204ENST00000586057 BRD1O95696 1058 aa12.14□□□□□ -0.47
TIMP2-204ENST00000586057 IFIT2P09913 472 aaKnown RBP12.14□□□□□ -0.47
TIMP2-204ENST00000586057 POLA2Q14181 598 aa12.14□□□□□ -0.47
TIMP2-204ENST00000586057 AXDND1Q5T1B0 1012 aaPredicted RBP12.14□□□□□ -0.47
TIMP2-204ENST00000586057 CTR9Q6PD62 1173 aa12.14□□□□□ -0.47
TIMP2-204ENST00000586057 AACSQ86V21 672 aa12.14□□□□□ -0.47
TIMP2-204ENST00000586057 CLASRPQ8N2M8 674 aaKnown RBP12.14□□□□□ -0.47
TIMP2-204ENST00000586057 COL14A1Q05707 1796 aaKnown RBP12.14□□□□□ -0.47
TIMP2-204ENST00000586057 AFF2P51816 1311 aa12.13□□□□□ -0.47
TIMP2-204ENST00000586057 LOC102724428A0A0B4J2F2 783 aa12.13□□□□□ -0.47
TIMP2-204ENST00000586057 CYP19A1P11511 503 aaPredicted RBP12.13□□□□□ -0.47
TIMP2-204ENST00000586057 SIK1P57059 783 aa12.13□□□□□ -0.47
TIMP2-204ENST00000586057 USP26Q9BXU7 913 aa12.13□□□□□ -0.47
TIMP2-204ENST00000586057 PARP4Q9UKK3 1724 aaKnown RBP12.13□□□□□ -0.47
TIMP2-204ENST00000586057 LOC102724159A0A0B4J2E5 919 aa12.13□□□□□ -0.47
TIMP2-204ENST00000586057 REC8O95072 547 aa12.13□□□□□ -0.47
TIMP2-204ENST00000586057 PWP2Q15269 919 aaKnown RBP12.13□□□□□ -0.47
TIMP2-204ENST00000586057 ZNF594Q96JF6 807 aaPredicted RBP12.13□□□□□ -0.47
TIMP2-204ENST00000586057 ST7Q9NRC1 585 aa12.13□□□□□ -0.47
TIMP2-204ENST00000586057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.13□□□□□ -0.47
TIMP2-204ENST00000586057 DISP2A7MBM2 1401 aa12.13□□□□□ -0.47
TIMP2-204ENST00000586057 GADD45BO75293 160 aaPredicted RBP12.13□□□□□ -0.47
TIMP2-204ENST00000586057 NOP2P46087 812 aaKnown RBP12.13□□□□□ -0.47
TIMP2-204ENST00000586057 DZIP3Q86Y13 1208 aaKnown RBP12.13□□□□□ -0.47
TIMP2-204ENST00000586057 BCL9O00512 1426 aa12.12□□□□□ -0.47
TIMP2-204ENST00000586057 PKD1L3Q7Z443 1732 aa12.12□□□□□ -0.47
TIMP2-204ENST00000586057 VPS72Q15906 364 aa12.12□□□□□ -0.47
TIMP2-204ENST00000586057 DHX16O60231 1041 aaKnown RBP12.12□□□□□ -0.47
TIMP2-204ENST00000586057 RBM6P78332 1123 aaKnown RBP12.12□□□□□ -0.47
TIMP2-204ENST00000586057 HSP90AB4PQ58FF6 505 aa12.12□□□□□ -0.47
TIMP2-204ENST00000586057 PXDNLA1KZ92 1463 aa12.12□□□□□ -0.47
TIMP2-204ENST00000586057 C5P01031 1676 aa12.12□□□□□ -0.47
TIMP2-204ENST00000586057 RAB11FIP3O75154 756 aa12.12□□□□□ -0.47
TIMP2-204ENST00000586057 CASC1Q6TDU7 716 aa12.12□□□□□ -0.47
TIMP2-204ENST00000586057 MRC1P22897 1456 aa12.12□□□□□ -0.47
TIMP2-204ENST00000586057 CRKLP46109 303 aaKnown RBP12.11□□□□□ -0.47
TIMP2-204ENST00000586057 ITPK1Q13572 414 aa12.11□□□□□ -0.47
TIMP2-204ENST00000586057 BICDL1Q6ZP65 573 aa12.11□□□□□ -0.47
TIMP2-204ENST00000586057 GDPD2Q9HCC8 539 aa12.11□□□□□ -0.47
TIMP2-204ENST00000586057 TCIRG1Q13488 830 aa12.11□□□□□ -0.47
TIMP2-204ENST00000586057 BARGINQ6ZT62 677 aa12.11□□□□□ -0.47
TIMP2-204ENST00000586057 USP48Q86UV5 1035 aa12.11□□□□□ -0.47
TIMP2-204ENST00000586057 NEUROD6Q96NK8 337 aa12.11□□□□□ -0.47
TIMP2-204ENST00000586057 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.11□□□□□ -0.47
TIMP2-204ENST00000586057 TNS2Q63HR2 1409 aa12.11□□□□□ -0.47
TIMP2-204ENST00000586057 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
TIMP2-204ENST00000586057 PTGS1P23219 599 aa12.1□□□□□ -0.47
TIMP2-204ENST00000586057 FOXD4L6Q3SYB3 417 aaPredicted RBP12.1□□□□□ -0.47
TIMP2-204ENST00000586057 FOXD4L3Q6VB84 417 aaPredicted RBP12.1□□□□□ -0.47
TIMP2-204ENST00000586057 TRMT112Q9UI30 125 aaKnown RBP12.1□□□□□ -0.47
TIMP2-204ENST00000586057 SASH1O94885 1247 aa12.1□□□□□ -0.47
TIMP2-204ENST00000586057 BMS1Q14692 1282 aaKnown RBP12.1□□□□□ -0.47
TIMP2-204ENST00000586057 FBXO38Q6PIJ6 1188 aa12.1□□□□□ -0.47
TIMP2-204ENST00000586057 MYCBPQ99417 103 aaPredicted RBP12.1□□□□□ -0.47
TIMP2-204ENST00000586057 TMX1Q9H3N1 280 aa12.1□□□□□ -0.47
TIMP2-204ENST00000586057 TLR7Q9NYK1 1049 aaKnown RBP12.1□□□□□ -0.47
TIMP2-204ENST00000586057 SIPA1L3O60292 1781 aaPredicted RBP12.1□□□□□ -0.47
TIMP2-204ENST00000586057 CACNA1FO60840 1977 aa12.1□□□□□ -0.47
TIMP2-204ENST00000586057 ICE2Q659A1 982 aa12.1□□□□□ -0.47
TIMP2-204ENST00000586057 FNBP4Q8N3X1 1017 aaPredicted RBP12.1□□□□□ -0.47
TIMP2-204ENST00000586057 QTRT2Q9H974 415 aaKnown RBP12.1□□□□□ -0.47
TIMP2-204ENST00000586057 NDUFB9Q9Y6M9 179 aa12.1□□□□□ -0.47
TIMP2-204ENST00000586057 BCL9LQ86UU0 1499 aa12.1□□□□□ -0.47
TIMP2-204ENST00000586057 SLFNL1Q499Z3 407 aa12.09□□□□□ -0.47
TIMP2-204ENST00000586057 TEX35Q5T0J7 233 aa12.09□□□□□ -0.47
TIMP2-204ENST00000586057 ZNF622Q969S3 477 aaKnown RBP eCLIP12.09□□□□□ -0.47
TIMP2-204ENST00000586057 EAF2Q96CJ1 260 aaPredicted RBP12.09□□□□□ -0.47
TIMP2-204ENST00000586057 GJD4Q96KN9 370 aaPredicted RBP12.09□□□□□ -0.47
TIMP2-204ENST00000586057 PALLDQ8WX93 1383 aa12.09□□□□□ -0.47
TIMP2-204ENST00000586057 KCPQ6ZWJ8 1503 aa12.09□□□□□ -0.47
TIMP2-204ENST00000586057 PLEKHG2Q9H7P9 1386 aa12.09□□□□□ -0.47
TIMP2-204ENST00000586057 AP5Z1O43299 807 aa12.09□□□□□ -0.47
TIMP2-204ENST00000586057 TFCP2Q12800 502 aa12.09□□□□□ -0.47
TIMP2-204ENST00000586057 MUM1L1Q5H9M0 696 aa12.09□□□□□ -0.47
TIMP2-204ENST00000586057 TXLNBQ8N3L3 684 aa12.09□□□□□ -0.47
TIMP2-204ENST00000586057 CCDC191Q8NCU4 936 aa12.09□□□□□ -0.47
TIMP2-204ENST00000586057 ZNF592Q92610 1267 aa12.09□□□□□ -0.47
TIMP2-204ENST00000586057 BOLA2Q9H3K6 86 aa12.09□□□□□ -0.47
TIMP2-204ENST00000586057 CCDC87Q9NVE4 849 aa12.09□□□□□ -0.47
TIMP2-204ENST00000586057 SLIT2O94813 1529 aa12.09□□□□□ -0.47
TIMP2-204ENST00000586057 TPD52L1Q16890 204 aaPredicted RBP12.09□□□□□ -0.47
TIMP2-204ENST00000586057 BCCIPQ9P287 314 aaKnown RBP eCLIP12.09□□□□□ -0.47
TIMP2-204ENST00000586057 ZNF215Q9UL58 517 aaPredicted RBP12.09□□□□□ -0.47
TIMP2-204ENST00000586057 EP400Q96L91 3159 aa12.08□□□□□ -0.47
TIMP2-204ENST00000586057 MAP3K15Q6ZN16 1313 aa12.08□□□□□ -0.48
TIMP2-204ENST00000586057 ADAMTS7Q9UKP4 1686 aa12.08□□□□□ -0.48
TIMP2-204ENST00000586057 CASQ1P31415 396 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms