RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 TRAF5O00463 557 aa13.64□□□□□ -0.23
MBD3-203ENST00000585903 PSMD14O00487 310 aa13.64□□□□□ -0.23
MBD3-203ENST00000585903 CELF2O95319 508 aaKnown RBP13.64□□□□□ -0.23
MBD3-203ENST00000585903 HIRAP54198 1017 aaPredicted RBP13.64□□□□□ -0.23
MBD3-203ENST00000585903 GPSM2P81274 684 aa13.64□□□□□ -0.23
MBD3-203ENST00000585903 TBC1D16Q8TBP0 767 aa13.64□□□□□ -0.23
MBD3-203ENST00000585903 PHAXQ9H814 394 aaKnown RBP13.64□□□□□ -0.23
MBD3-203ENST00000585903 PDE4DIPQ5VU43 2346 aa13.64□□□□□ -0.23
MBD3-203ENST00000585903 IL16Q14005 1332 aa13.64□□□□□ -0.23
MBD3-203ENST00000585903 SCN9AQ15858 1988 aa13.63□□□□□ -0.23
MBD3-203ENST00000585903 C6orf229H3BNL8 230 aa13.63□□□□□ -0.23
MBD3-203ENST00000585903 ECE2O60344 883 aa13.63□□□□□ -0.23
MBD3-203ENST00000585903 VIL1P09327 827 aaKnown RBP13.63□□□□□ -0.23
MBD3-203ENST00000585903 MMP14P50281 582 aa13.63□□□□□ -0.23
MBD3-203ENST00000585903 BRPF1P55201 1214 aaPredicted RBP13.63□□□□□ -0.23
MBD3-203ENST00000585903 TRPM4Q8TD43 1214 aa13.63□□□□□ -0.23
MBD3-203ENST00000585903 ZC3H12CQ9C0D7 883 aaKnown RBP13.63□□□□□ -0.23
MBD3-203ENST00000585903 POLR2AP24928 1970 aaKnown RBP13.63□□□□□ -0.23
MBD3-203ENST00000585903 COL4A1P02462 1669 aa13.63□□□□□ -0.23
MBD3-203ENST00000585903 CYP4F22Q6NT55 531 aa13.62□□□□□ -0.23
MBD3-203ENST00000585903 KSR2Q6VAB6 950 aa13.62□□□□□ -0.23
MBD3-203ENST00000585903 C8orf58Q8NAV2 365 aa13.62□□□□□ -0.23
MBD3-203ENST00000585903 AGBL3Q8NEM8 1001 aa13.62□□□□□ -0.23
MBD3-203ENST00000585903 MYD88Q99836 296 aa13.62□□□□□ -0.23
MBD3-203ENST00000585903 GLIS2Q9BZE0 524 aaPredicted RBP13.62□□□□□ -0.23
MBD3-203ENST00000585903 GGA1Q9UJY5 639 aa13.62□□□□□ -0.23
MBD3-203ENST00000585903 XDHP47989 1333 aa13.62□□□□□ -0.23
MBD3-203ENST00000585903 FMR1Q06787 632 aaKnown RBP eCLIP13.61□□□□□ -0.23
MBD3-203ENST00000585903 NOGQ13253 232 aa13.61□□□□□ -0.23
MBD3-203ENST00000585903 CDC5LQ99459 802 aaKnown RBP13.61□□□□□ -0.23
MBD3-203ENST00000585903 STK31Q9BXU1 1019 aa13.61□□□□□ -0.23
MBD3-203ENST00000585903 MCOLN1Q9GZU1 580 aa13.61□□□□□ -0.23
MBD3-203ENST00000585903 DBNDD1Q9H9R9 158 aa13.61□□□□□ -0.23
MBD3-203ENST00000585903 MRS2Q9HD23 443 aa13.61□□□□□ -0.23
MBD3-203ENST00000585903 ANKIB1Q9P2G1 1089 aa13.61□□□□□ -0.23
MBD3-203ENST00000585903 CASP8AP2Q9UKL3 1982 aa13.61□□□□□ -0.23
MBD3-203ENST00000585903 ATP2B4P23634 1241 aa13.6□□□□□ -0.23
MBD3-203ENST00000585903 ZNF280AP59817 542 aaPredicted RBP13.6□□□□□ -0.23
MBD3-203ENST00000585903 NEXNQ0ZGT2 675 aa13.6□□□□□ -0.23
MBD3-203ENST00000585903 PAXIP1Q6ZW49 1069 aaPredicted RBP13.6□□□□□ -0.23
MBD3-203ENST00000585903 PODNQ7Z5L7 613 aa13.6□□□□□ -0.23
MBD3-203ENST00000585903 ANKRD18AQ8IVF6 992 aa13.6□□□□□ -0.23
MBD3-203ENST00000585903 DCPSQ96C86 337 aaKnown RBP13.6□□□□□ -0.23
MBD3-203ENST00000585903 CCER2I3L3R5 266 aa13.59□□□□□ -0.23
MBD3-203ENST00000585903 ELL2O00472 640 aaPredicted RBP13.59□□□□□ -0.23
MBD3-203ENST00000585903 RIMBP2O15034 1052 aa13.59□□□□□ -0.23
MBD3-203ENST00000585903 UFL1O94874 794 aa13.59□□□□□ -0.23
MBD3-203ENST00000585903 CTSWP56202 376 aa13.59□□□□□ -0.23
MBD3-203ENST00000585903 RTL5Q5HYW3 569 aaPredicted RBP13.59□□□□□ -0.23
MBD3-203ENST00000585903 KRT26Q7Z3Y9 468 aa13.59□□□□□ -0.23
MBD3-203ENST00000585903 SEC31BQ9NQW1 1179 aa13.59□□□□□ -0.23
MBD3-203ENST00000585903 BSDC1Q9NW68 430 aaPredicted RBP13.59□□□□□ -0.23
MBD3-203ENST00000585903 TSKSQ9UJT2 592 aa13.59□□□□□ -0.23
MBD3-203ENST00000585903 MAP3K2Q9Y2U5 619 aa13.59□□□□□ -0.23
MBD3-203ENST00000585903 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
MBD3-203ENST00000585903 PITPNM2Q9BZ72 1349 aa13.59□□□□□ -0.23
MBD3-203ENST00000585903 MED23Q9ULK4 1368 aa13.58□□□□□ -0.23
MBD3-203ENST00000585903 PI4KAP2A4QPH2 592 aa13.58□□□□□ -0.24
MBD3-203ENST00000585903 KIF4BQ2VIQ3 1234 aa13.58□□□□□ -0.24
MBD3-203ENST00000585903 RSBN1LQ6PCB5 846 aaPredicted RBP13.58□□□□□ -0.24
MBD3-203ENST00000585903 SAMD7Q7Z3H4 446 aa13.58□□□□□ -0.24
MBD3-203ENST00000585903 WWC1Q8IX03 1113 aa13.58□□□□□ -0.24
MBD3-203ENST00000585903 PI4KAP1Q8N8J0 262 aa13.58□□□□□ -0.24
MBD3-203ENST00000585903 CCDC102AQ96A19 550 aa13.58□□□□□ -0.24
MBD3-203ENST00000585903 PLA2G12BQ9BX93 195 aa13.58□□□□□ -0.24
MBD3-203ENST00000585903 SHTN1A0MZ66 631 aa13.57□□□□□ -0.24
MBD3-203ENST00000585903 G3V3G9 751 aa13.57□□□□□ -0.24
MBD3-203ENST00000585903 IGKV5-2P06315 115 aa13.57□□□□□ -0.24
MBD3-203ENST00000585903 FKBP1BP68106 108 aa13.57□□□□□ -0.24
MBD3-203ENST00000585903 DOK7Q18PE1 504 aa13.57□□□□□ -0.24
MBD3-203ENST00000585903 TBC1D10BQ4KMP7 808 aaPredicted RBP13.57□□□□□ -0.24
MBD3-203ENST00000585903 DCAF8Q5TAQ9 597 aa13.57□□□□□ -0.24
MBD3-203ENST00000585903 USP48Q86UV5 1035 aa13.57□□□□□ -0.24
MBD3-203ENST00000585903 REM2Q8IYK8 340 aaPredicted RBP13.57□□□□□ -0.24
MBD3-203ENST00000585903 TSPYL6Q8N831 410 aa13.57□□□□□ -0.24
MBD3-203ENST00000585903 C2orf69Q8N8R5 385 aa13.57□□□□□ -0.24
MBD3-203ENST00000585903 TTLL11Q8NHH1 800 aa13.57□□□□□ -0.24
MBD3-203ENST00000585903 GMLQ99445 158 aa13.57□□□□□ -0.24
MBD3-203ENST00000585903 SAGE1Q9NXZ1 904 aa13.57□□□□□ -0.24
MBD3-203ENST00000585903 MYO3BQ8WXR4 1341 aa13.57□□□□□ -0.24
MBD3-203ENST00000585903 ZNF646O15015 1829 aaPredicted RBP13.56□□□□□ -0.24
MBD3-203ENST00000585903 NEURL1BA8MQ27 555 aa13.56□□□□□ -0.24
MBD3-203ENST00000585903 H7C1W4 665 aa13.56□□□□□ -0.24
MBD3-203ENST00000585903 HUNKP57058 714 aa13.56□□□□□ -0.24
MBD3-203ENST00000585903 TWISTNBQ3B726 338 aaPredicted RBP13.56□□□□□ -0.24
MBD3-203ENST00000585903 RGMBQ6NW40 437 aa13.56□□□□□ -0.24
MBD3-203ENST00000585903 SULF1Q8IWU6 871 aa13.56□□□□□ -0.24
MBD3-203ENST00000585903 MIER1Q8N108 512 aa13.56□□□□□ -0.24
MBD3-203ENST00000585903 GBA2Q9HCG7 927 aaPredicted RBP13.56□□□□□ -0.24
MBD3-203ENST00000585903 KCNQ5Q9NR82 932 aa13.56□□□□□ -0.24
MBD3-203ENST00000585903 AKAP11Q9UKA4 1901 aa13.55□□□□□ -0.24
MBD3-203ENST00000585903 USP17L3A6NCW0 530 aa13.55□□□□□ -0.24
MBD3-203ENST00000585903 USP17L4A6NCW7 530 aa13.55□□□□□ -0.24
MBD3-203ENST00000585903 AOC2O75106 756 aa13.55□□□□□ -0.24
MBD3-203ENST00000585903 EGFRP00533 1210 aa13.55□□□□□ -0.24
MBD3-203ENST00000585903 USP17L1Q7RTZ2 530 aa13.55□□□□□ -0.24
MBD3-203ENST00000585903 WDR63Q8IWG1 891 aa13.55□□□□□ -0.24
MBD3-203ENST00000585903 ZNF428Q96B54 188 aa13.55□□□□□ -0.24
MBD3-203ENST00000585903 MYH16Q9H6N6 1097 aa13.55□□□□□ -0.24
MBD3-203ENST00000585903 ZNF408Q9H9D4 720 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms