RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 ZPR1O75312 459 aa14.72□□□□□ -0.05
SMARCA4-208ENST00000585799 ZSCAN23Q3MJ62 389 aa14.72□□□□□ -0.05
SMARCA4-208ENST00000585799 UTP14AQ9BVJ6 771 aaKnown RBP14.72□□□□□ -0.05
SMARCA4-208ENST00000585799 ZNF652Q9Y2D9 606 aa14.72□□□□□ -0.05
SMARCA4-208ENST00000585799 ZNF213O14771 459 aa14.72□□□□□ -0.05
SMARCA4-208ENST00000585799 SLC5A1P13866 664 aa14.72□□□□□ -0.05
SMARCA4-208ENST00000585799 CTNNA3Q9UI47 895 aa14.72□□□□□ -0.05
SMARCA4-208ENST00000585799 FMN2Q9NZ56 1722 aa14.72□□□□□ -0.05
SMARCA4-208ENST00000585799 ME3Q16798 604 aa14.71□□□□□ -0.05
SMARCA4-208ENST00000585799 VPS53Q5VIR6 699 aa14.71□□□□□ -0.05
SMARCA4-208ENST00000585799 GIGYF2Q6Y7W6 1299 aaKnown RBP14.71□□□□□ -0.05
SMARCA4-208ENST00000585799 SPATA32Q96LK8 384 aa14.71□□□□□ -0.05
SMARCA4-208ENST00000585799 TSPY26PQ9H489 355 aa14.71□□□□□ -0.05
SMARCA4-208ENST00000585799 CCDC87Q9NVE4 849 aa14.71□□□□□ -0.05
SMARCA4-208ENST00000585799 MAP3K15Q6ZN16 1313 aa14.71□□□□□ -0.06
SMARCA4-208ENST00000585799 XRN1Q8IZH2 1706 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 GADD45BO75293 160 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 NCOA5Q9HCD5 579 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 ERBB4Q15303 1308 aa14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 SH3TC1Q8TE82 1336 aa14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 KCNQ2O43526 872 aa14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 ZSCAN25Q6NSZ9 544 aa14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 NUP133Q8WUM0 1156 aa14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 LMBRD1Q9NUN5 540 aa14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 HMG20BQ9P0W2 317 aa14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 LOC102724428A0A0B4J2F2 783 aa14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 SIK1P57059 783 aa14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 GAS2L3Q86XJ1 694 aa14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 MIGA1Q8NAN2 632 aa14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 ZBTB38Q8NAP3 1195 aaPredicted RBP14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 INTS4Q96HW7 963 aaKnown RBP14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 NAPBQ9H115 298 aa14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 NALCNQ8IZF0 1738 aa14.7□□□□□ -0.06
SMARCA4-208ENST00000585799 JAK2O60674 1132 aa14.69□□□□□ -0.06
SMARCA4-208ENST00000585799 RXRAP19793 462 aa14.69□□□□□ -0.06
SMARCA4-208ENST00000585799 TPCN1Q9ULQ1 816 aa14.69□□□□□ -0.06
SMARCA4-208ENST00000585799 SALL3Q9BXA9 1300 aa14.69□□□□□ -0.06
SMARCA4-208ENST00000585799 RPS6KB1P23443 525 aa14.69□□□□□ -0.06
SMARCA4-208ENST00000585799 NLRP10Q86W26 655 aa14.69□□□□□ -0.06
SMARCA4-208ENST00000585799 PIBF1Q8WXW3 757 aa14.69□□□□□ -0.06
SMARCA4-208ENST00000585799 SEC31BQ9NQW1 1179 aa14.69□□□□□ -0.06
SMARCA4-208ENST00000585799 GOLGA8BA8MQT2 603 aa14.69□□□□□ -0.06
SMARCA4-208ENST00000585799 F13A1P00488 732 aa14.69□□□□□ -0.06
SMARCA4-208ENST00000585799 PCCAP05165 728 aaPredicted RBP14.69□□□□□ -0.06
SMARCA4-208ENST00000585799 CCDC152Q4G0S7 254 aa14.69□□□□□ -0.06
SMARCA4-208ENST00000585799 HAUS7Q99871 368 aa14.69□□□□□ -0.06
SMARCA4-208ENST00000585799 PDE8AO60658 829 aa14.68□□□□□ -0.06
SMARCA4-208ENST00000585799 CRKLP46109 303 aaKnown RBP14.68□□□□□ -0.06
SMARCA4-208ENST00000585799 FOXO4P98177 505 aa14.68□□□□□ -0.06
SMARCA4-208ENST00000585799 MAP3K12Q12852 859 aa14.68□□□□□ -0.06
SMARCA4-208ENST00000585799 MAP4K1Q92918 833 aa14.68□□□□□ -0.06
SMARCA4-208ENST00000585799 NFAT5O94916 1531 aa14.68□□□□□ -0.06
SMARCA4-208ENST00000585799 ERICH2A1L162 156 aa14.68□□□□□ -0.06
SMARCA4-208ENST00000585799 G3V3G9 751 aa14.68□□□□□ -0.06
SMARCA4-208ENST00000585799 CTSWP56202 376 aa14.68□□□□□ -0.06
SMARCA4-208ENST00000585799 DCAF8Q5TAQ9 597 aa14.68□□□□□ -0.06
SMARCA4-208ENST00000585799 NBPF5PQ86XG9 351 aaPredicted RBP14.68□□□□□ -0.06
SMARCA4-208ENST00000585799 TAF6LQ9Y6J9 622 aa14.68□□□□□ -0.06
SMARCA4-208ENST00000585799 CKAP2LQ8IYA6 745 aa14.68□□□□□ -0.06
SMARCA4-208ENST00000585799 GNPATO15228 680 aa14.67□□□□□ -0.06
SMARCA4-208ENST00000585799 ME1P48163 572 aa14.67□□□□□ -0.06
SMARCA4-208ENST00000585799 TRIM29Q14134 588 aa14.67□□□□□ -0.06
SMARCA4-208ENST00000585799 GIMAP6Q6P9H5 292 aa14.67□□□□□ -0.06
SMARCA4-208ENST00000585799 MICU3Q86XE3 530 aa14.67□□□□□ -0.06
SMARCA4-208ENST00000585799 GNL3LQ9NVN8 582 aaKnown RBP14.67□□□□□ -0.06
SMARCA4-208ENST00000585799 KLF18A0A0U1RQI7 1052 aa14.67□□□□□ -0.06
SMARCA4-208ENST00000585799 BRD1O95696 1058 aa14.67□□□□□ -0.06
SMARCA4-208ENST00000585799 AKAP17AQ02040 695 aaKnown RBP14.67□□□□□ -0.06
SMARCA4-208ENST00000585799 CCDC73Q6ZRK6 1079 aa14.66□□□□□ -0.06
SMARCA4-208ENST00000585799 MAGEB6Q8N7X4 407 aa14.66□□□□□ -0.06
SMARCA4-208ENST00000585799 POLR3DP05423 398 aaPredicted RBP14.66□□□□□ -0.06
SMARCA4-208ENST00000585799 PHKA1P46020 1223 aa14.66□□□□□ -0.06
SMARCA4-208ENST00000585799 ZSWIM6Q9HCJ5 1215 aa14.66□□□□□ -0.06
SMARCA4-208ENST00000585799 CYP21A2P08686 494 aa14.66□□□□□ -0.06
SMARCA4-208ENST00000585799 NACAP1Q9BZK3 213 aa14.66□□□□□ -0.06
SMARCA4-208ENST00000585799 GPAA1O43292 621 aa14.65□□□□□ -0.06
SMARCA4-208ENST00000585799 CDC5LQ99459 802 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-208ENST00000585799 SDF4Q9BRK5 362 aa14.65□□□□□ -0.06
SMARCA4-208ENST00000585799 ZDHHC9Q9Y397 364 aa14.65□□□□□ -0.06
SMARCA4-208ENST00000585799 TOPAZ1Q8N9V7 1692 aa14.65□□□□□ -0.06
SMARCA4-208ENST00000585799 STK38Q15208 465 aa14.65□□□□□ -0.06
SMARCA4-208ENST00000585799 NECTIN1Q15223 517 aa14.65□□□□□ -0.06
SMARCA4-208ENST00000585799 OTUD7BQ6GQQ9 843 aa14.65□□□□□ -0.06
SMARCA4-208ENST00000585799 DHX32Q7L7V1 743 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-208ENST00000585799 ANKRD18AQ8IVF6 992 aa14.65□□□□□ -0.06
SMARCA4-208ENST00000585799 SMARCC1Q92922 1105 aaPredicted RBP14.65□□□□□ -0.06
SMARCA4-208ENST00000585799 NSFL1CQ9UNZ2 370 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-208ENST00000585799 TMEM63CQ9P1W3 806 aa14.65□□□□□ -0.06
SMARCA4-208ENST00000585799 ANKIB1Q9P2G1 1089 aa14.65□□□□□ -0.06
SMARCA4-208ENST00000585799 PRC1O43663 620 aa14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 CYP19A1P11511 503 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 RFX5P48382 616 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 SASS6Q6UVJ0 657 aa14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 ATG9AQ7Z3C6 839 aa14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 TTLL11Q8NHH1 800 aa14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 SETDB2Q96T68 719 aa14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 HMGB1P09429 215 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 HSPD1P10809 573 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 CAVIN4Q5BKX8 364 aa14.64□□□□□ -0.07
SMARCA4-208ENST00000585799 CDC37L1Q7L3B6 337 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms