RNA–Protein interactions for RNA: ENST00000585027.1

TMEM199-209, Transcript of transmembrane protein 199, humanhuman

TSL 2

Gene TMEM199, Length 586 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM199-209ENST00000585027 ZNF609O15014 1411 aa12.89□□□□□ -0.35
TMEM199-209ENST00000585027 RASSF10A6NK89 507 aa12.89□□□□□ -0.35
TMEM199-209ENST00000585027 RIMBP2O15034 1052 aa12.89□□□□□ -0.35
TMEM199-209ENST00000585027 HIRAP54198 1017 aaPredicted RBP12.89□□□□□ -0.35
TMEM199-209ENST00000585027 FAM9BQ8IZU0 186 aa12.89□□□□□ -0.35
TMEM199-209ENST00000585027 DNAAF4Q8WXU2 420 aa12.89□□□□□ -0.35
TMEM199-209ENST00000585027 DPF2Q92785 391 aa12.89□□□□□ -0.35
TMEM199-209ENST00000585027 CCDC85AQ96PX6 553 aaPredicted RBP12.89□□□□□ -0.35
TMEM199-209ENST00000585027 THSD7BQ9C0I4 1608 aa12.88□□□□□ -0.35
TMEM199-209ENST00000585027 PSMD14O00487 310 aa12.88□□□□□ -0.35
TMEM199-209ENST00000585027 ECE2O60344 883 aa12.88□□□□□ -0.35
TMEM199-209ENST00000585027 HSPA1AP0DMV8 641 aaKnown RBP12.88□□□□□ -0.35
TMEM199-209ENST00000585027 HSPA1BP0DMV9 641 aaKnown RBP12.88□□□□□ -0.35
TMEM199-209ENST00000585027 FMR1Q06787 632 aaKnown RBP eCLIP12.88□□□□□ -0.35
TMEM199-209ENST00000585027 FKBP5Q13451 457 aaPredicted RBP12.88□□□□□ -0.35
TMEM199-209ENST00000585027 UBE3BQ7Z3V4 1068 aa12.88□□□□□ -0.35
TMEM199-209ENST00000585027 ANKRD18AQ8IVF6 992 aa12.88□□□□□ -0.35
TMEM199-209ENST00000585027 LINS1Q8NG48 757 aa12.88□□□□□ -0.35
TMEM199-209ENST00000585027 ZC3H15Q8WU90 426 aaKnown RBP12.88□□□□□ -0.35
TMEM199-209ENST00000585027 GPR101Q96P66 508 aaPredicted RBP12.88□□□□□ -0.35
TMEM199-209ENST00000585027 GREM2Q9H772 168 aa12.88□□□□□ -0.35
TMEM199-209ENST00000585027 KCNQ5Q9NR82 932 aa12.88□□□□□ -0.35
TMEM199-209ENST00000585027 GGA1Q9UJY5 639 aa12.88□□□□□ -0.35
TMEM199-209ENST00000585027 ZNF646O15015 1829 aaPredicted RBP12.88□□□□□ -0.35
TMEM199-209ENST00000585027 XDHP47989 1333 aa12.88□□□□□ -0.35
TMEM199-209ENST00000585027 SHTN1A0MZ66 631 aa12.87□□□□□ -0.35
TMEM199-209ENST00000585027 UFL1O94874 794 aa12.87□□□□□ -0.35
TMEM199-209ENST00000585027 RPS12P25398 132 aaKnown RBP12.87□□□□□ -0.35
TMEM199-209ENST00000585027 VEGFBP49765 207 aa12.87□□□□□ -0.35
TMEM199-209ENST00000585027 DOK7Q18PE1 504 aa12.87□□□□□ -0.35
TMEM199-209ENST00000585027 CST9Q5W186 159 aa12.87□□□□□ -0.35
TMEM199-209ENST00000585027 TRPM4Q8TD43 1214 aa12.87□□□□□ -0.35
TMEM199-209ENST00000585027 CDC5LQ99459 802 aaKnown RBP12.87□□□□□ -0.35
TMEM199-209ENST00000585027 BCL2L13Q9BXK5 485 aa12.87□□□□□ -0.35
TMEM199-209ENST00000585027 ZC3H12CQ9C0D7 883 aaKnown RBP12.87□□□□□ -0.35
TMEM199-209ENST00000585027 MYH16Q9H6N6 1097 aa12.87□□□□□ -0.35
TMEM199-209ENST00000585027 BSDC1Q9NW68 430 aaPredicted RBP12.87□□□□□ -0.35
TMEM199-209ENST00000585027 ANKIB1Q9P2G1 1089 aa12.87□□□□□ -0.35
TMEM199-209ENST00000585027 CNOT7Q9UIV1 285 aaKnown RBP12.87□□□□□ -0.35
TMEM199-209ENST00000585027 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
TMEM199-209ENST00000585027 TRAF5O00463 557 aa12.86□□□□□ -0.35
TMEM199-209ENST00000585027 CSF1RP07333 972 aa12.86□□□□□ -0.35
TMEM199-209ENST00000585027 VIL1P09327 827 aaKnown RBP12.86□□□□□ -0.35
TMEM199-209ENST00000585027 MICALL2Q8IY33 904 aa12.86□□□□□ -0.35
TMEM199-209ENST00000585027 MINPP1Q9UNW1 487 aa12.86□□□□□ -0.35
TMEM199-209ENST00000585027 MED23Q9ULK4 1368 aa12.85□□□□□ -0.35
TMEM199-209ENST00000585027 A0A1B0GUL6 1792 aa12.85□□□□□ -0.35
TMEM199-209ENST00000585027 H7C1D1 291 aa12.85□□□□□ -0.35
TMEM199-209ENST00000585027 ATP2B4P23634 1241 aa12.85□□□□□ -0.35
TMEM199-209ENST00000585027 BEND3Q5T5X7 828 aa12.85□□□□□ -0.35
TMEM199-209ENST00000585027 COL13A1Q5TAT6 717 aaPredicted RBP12.85□□□□□ -0.35
TMEM199-209ENST00000585027 WTIPA6NIX2 430 aaPredicted RBP12.84□□□□□ -0.35
TMEM199-209ENST00000585027 F6X3S4 739 aa12.84□□□□□ -0.35
TMEM199-209ENST00000585027 EGFRP00533 1210 aa12.84□□□□□ -0.35
TMEM199-209ENST00000585027 DEFB115Q30KQ5 88 aa12.84□□□□□ -0.35
TMEM199-209ENST00000585027 SAMD7Q7Z3H4 446 aa12.84□□□□□ -0.35
TMEM199-209ENST00000585027 GLIS2Q9BZE0 524 aaPredicted RBP12.84□□□□□ -0.35
TMEM199-209ENST00000585027 ITGA6P23229 1130 aa12.83□□□□□ -0.36
TMEM199-209ENST00000585027 FOXO4P98177 505 aa12.83□□□□□ -0.36
TMEM199-209ENST00000585027 FAM161AQ3B820 660 aa12.83□□□□□ -0.36
TMEM199-209ENST00000585027 CDC37L1Q7L3B6 337 aa12.83□□□□□ -0.36
TMEM199-209ENST00000585027 PODNQ7Z5L7 613 aa12.83□□□□□ -0.36
TMEM199-209ENST00000585027 GMLQ99445 158 aa12.83□□□□□ -0.36
TMEM199-209ENST00000585027 ABT1Q9ULW3 272 aaKnown RBP12.83□□□□□ -0.36
TMEM199-209ENST00000585027 TLL2Q9Y6L7 1015 aa12.83□□□□□ -0.36
TMEM199-209ENST00000585027 WDR33Q9C0J8 1336 aaKnown RBP12.83□□□□□ -0.36
TMEM199-209ENST00000585027 CCT4P50991 539 aaKnown RBP12.82□□□□□ -0.36
TMEM199-209ENST00000585027 ZNF280AP59817 542 aaPredicted RBP12.82□□□□□ -0.36
TMEM199-209ENST00000585027 RSBN1LQ6PCB5 846 aaPredicted RBP12.82□□□□□ -0.36
TMEM199-209ENST00000585027 AGBL3Q8NEM8 1001 aa12.82□□□□□ -0.36
TMEM199-209ENST00000585027 WBP1LQ9NX94 342 aa12.82□□□□□ -0.36
TMEM199-209ENST00000585027 FOXN1O15353 648 aa12.81□□□□□ -0.36
TMEM199-209ENST00000585027 IGHMBP2P38935 993 aaKnown RBP12.81□□□□□ -0.36
TMEM199-209ENST00000585027 TBC1D10BQ4KMP7 808 aaPredicted RBP12.81□□□□□ -0.36
TMEM199-209ENST00000585027 SAPCD2Q86UD0 394 aa12.81□□□□□ -0.36
TMEM199-209ENST00000585027 HHIPL1Q96JK4 782 aa12.81□□□□□ -0.36
TMEM199-209ENST00000585027 LEMD3Q9Y2U8 911 aa12.81□□□□□ -0.36
TMEM199-209ENST00000585027 POLR2AP24928 1970 aaKnown RBP12.81□□□□□ -0.36
TMEM199-209ENST00000585027 USP17L3A6NCW0 530 aa12.8□□□□□ -0.36
TMEM199-209ENST00000585027 USP17L4A6NCW7 530 aa12.8□□□□□ -0.36
TMEM199-209ENST00000585027 G3V3G9 751 aa12.8□□□□□ -0.36
TMEM199-209ENST00000585027 GRM8O00222 908 aa12.8□□□□□ -0.36
TMEM199-209ENST00000585027 ALDH1L1O75891 902 aa12.8□□□□□ -0.36
TMEM199-209ENST00000585027 CELF2O95319 508 aaKnown RBP12.8□□□□□ -0.36
TMEM199-209ENST00000585027 KIF4BQ2VIQ3 1234 aa12.8□□□□□ -0.36
TMEM199-209ENST00000585027 EPHA10Q5JZY3 1008 aa12.8□□□□□ -0.36
TMEM199-209ENST00000585027 DCAF8Q5TAQ9 597 aa12.8□□□□□ -0.36
TMEM199-209ENST00000585027 USP17L1Q7RTZ2 530 aa12.8□□□□□ -0.36
TMEM199-209ENST00000585027 TXNRD3Q86VQ6 643 aa12.8□□□□□ -0.36
TMEM199-209ENST00000585027 CAPNS2Q96L46 248 aa12.8□□□□□ -0.36
TMEM199-209ENST00000585027 ANKRD2Q9GZV1 360 aa12.8□□□□□ -0.36
TMEM199-209ENST00000585027 IRS2Q9Y4H2 1338 aa12.8□□□□□ -0.36
TMEM199-209ENST00000585027 E9PSI1 815 aa12.79□□□□□ -0.36
TMEM199-209ENST00000585027 ECE1P42892 770 aa12.79□□□□□ -0.36
TMEM199-209ENST00000585027 SLFN5Q08AF3 891 aa12.79□□□□□ -0.36
TMEM199-209ENST00000585027 DACT2Q5SW24 774 aa12.79□□□□□ -0.36
TMEM199-209ENST00000585027 USP48Q86UV5 1035 aa12.79□□□□□ -0.36
TMEM199-209ENST00000585027 MRPL50Q8N5N7 158 aaKnown RBP12.79□□□□□ -0.36
TMEM199-209ENST00000585027 COA1Q9GZY4 146 aa12.79□□□□□ -0.36
TMEM199-209ENST00000585027 ZNF804BA4D1E1 1349 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms