RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 DACT1Q9NYF0 836 aa13.32□□□□□ -0.28
TOP3A-217ENST00000584582 SPATA31A3Q5VYP0 1347 aa13.32□□□□□ -0.28
TOP3A-217ENST00000584582 ZNF213O14771 459 aa13.32□□□□□ -0.28
TOP3A-217ENST00000584582 STK38Q15208 465 aa13.32□□□□□ -0.28
TOP3A-217ENST00000584582 MIGA1Q8NAN2 632 aa13.32□□□□□ -0.28
TOP3A-217ENST00000584582 COL9A3Q14050 684 aaPredicted RBP13.32□□□□□ -0.28
TOP3A-217ENST00000584582 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.32□□□□□ -0.281e-6■■■■□ 21.2
TOP3A-217ENST00000584582 GPHNQ9NQX3 736 aaPredicted RBP13.32□□□□□ -0.28
TOP3A-217ENST00000584582 ZBTB1Q9Y2K1 713 aa13.32□□□□□ -0.28
TOP3A-217ENST00000584582 CEMIPQ8WUJ3 1361 aa13.32□□□□□ -0.28
TOP3A-217ENST00000584582 C1orf167Q5SNV9 1468 aa13.31□□□□□ -0.28
TOP3A-217ENST00000584582 AKAP2Q9Y2D5 859 aa13.31□□□□□ -0.28
TOP3A-217ENST00000584582 BIN1O00499 593 aa13.31□□□□□ -0.28
TOP3A-217ENST00000584582 DDB1Q16531 1140 aa13.31□□□□□ -0.28
TOP3A-217ENST00000584582 CCDC183Q5T5S1 534 aa13.31□□□□□ -0.28
TOP3A-217ENST00000584582 CPLX2Q6PUV4 134 aaKnown RBP13.31□□□□□ -0.28
TOP3A-217ENST00000584582 PIGBQ92521 554 aa13.31□□□□□ -0.28
TOP3A-217ENST00000584582 TTC12Q9H892 705 aaPredicted RBP13.31□□□□□ -0.28
TOP3A-217ENST00000584582 NIP7Q9Y221 180 aaKnown RBP eCLIP13.31□□□□□ -0.28
TOP3A-217ENST00000584582 KLF18A0A0U1RQI7 1052 aa13.31□□□□□ -0.28
TOP3A-217ENST00000584582 FSD2A1L4K1 749 aa13.31□□□□□ -0.28
TOP3A-217ENST00000584582 RPS6KB1P23443 525 aa13.31□□□□□ -0.28
TOP3A-217ENST00000584582 HLFQ16534 295 aa13.31□□□□□ -0.28
TOP3A-217ENST00000584582 ZSCAN30Q86W11 494 aa13.31□□□□□ -0.28
TOP3A-217ENST00000584582 C8orf37Q96NL8 207 aa13.31□□□□□ -0.28
TOP3A-217ENST00000584582 TRIM29Q14134 588 aa13.3□□□□□ -0.28
TOP3A-217ENST00000584582 ZKSCAN3Q9BRR0 538 aa13.3□□□□□ -0.28
TOP3A-217ENST00000584582 A0A087WWV3 80 aa13.3□□□□□ -0.28
TOP3A-217ENST00000584582 RAD21O60216 631 aa13.3□□□□□ -0.28
TOP3A-217ENST00000584582 KINO60870 393 aaKnown RBP13.3□□□□□ -0.28
TOP3A-217ENST00000584582 CCDC192P0DO97 292 aa13.3□□□□□ -0.28
TOP3A-217ENST00000584582 UBE2HP62256 183 aa13.3□□□□□ -0.28
TOP3A-217ENST00000584582 C17orf53Q8N3J3 647 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-217ENST00000584582 KBTBD3Q8NAB2 608 aa13.3□□□□□ -0.28
TOP3A-217ENST00000584582 GREM2Q9H772 168 aa13.3□□□□□ -0.28
TOP3A-217ENST00000584582 AOX1Q06278 1338 aa13.3□□□□□ -0.28
TOP3A-217ENST00000584582 WDR17Q8IZU2 1322 aa13.3□□□□□ -0.28
TOP3A-217ENST00000584582 CYP21A2P08686 494 aa13.29□□□□□ -0.28
TOP3A-217ENST00000584582 CCDC191Q8NCU4 936 aa13.29□□□□□ -0.28
TOP3A-217ENST00000584582 NRXN3Q9Y4C0 1643 aa13.29□□□□□ -0.28
TOP3A-217ENST00000584582 ATP5JP18859 108 aa13.29□□□□□ -0.28
TOP3A-217ENST00000584582 MYL10Q9BUA6 226 aa13.29□□□□□ -0.28
TOP3A-217ENST00000584582 COPRSQ9NQ92 184 aa13.29□□□□□ -0.28
TOP3A-217ENST00000584582 A0A0G2JLW4 131 aa13.29□□□□□ -0.28
TOP3A-217ENST00000584582 ADCY5O95622 1261 aa13.29□□□□□ -0.28
TOP3A-217ENST00000584582 MAP4K1Q92918 833 aa13.29□□□□□ -0.28
TOP3A-217ENST00000584582 FTOQ9C0B1 505 aaKnown RBP eCLIP13.29□□□□□ -0.28
TOP3A-217ENST00000584582 MAP3K11Q16584 847 aa13.28□□□□□ -0.28
TOP3A-217ENST00000584582 FILIP1Q7Z7B0 1213 aa13.28□□□□□ -0.28
TOP3A-217ENST00000584582 NAPBQ9H115 298 aa13.28□□□□□ -0.28
TOP3A-217ENST00000584582 RNF113AO15541 343 aaKnown RBP13.28□□□□□ -0.28
TOP3A-217ENST00000584582 IGHMBP2P38935 993 aaKnown RBP13.28□□□□□ -0.28
TOP3A-217ENST00000584582 AKAP17AQ02040 695 aaKnown RBP13.28□□□□□ -0.28
TOP3A-217ENST00000584582 TCIRG1Q13488 830 aa13.28□□□□□ -0.28
TOP3A-217ENST00000584582 MEX3CQ5U5Q3 659 aaKnown RBP13.28□□□□□ -0.28
TOP3A-217ENST00000584582 ORC3Q9UBD5 711 aaPredicted RBP13.28□□□□□ -0.28
TOP3A-217ENST00000584582 UBR1Q8IWV7 1749 aa13.28□□□□□ -0.28
TOP3A-217ENST00000584582 ZSWIM6Q9HCJ5 1215 aa13.28□□□□□ -0.28
TOP3A-217ENST00000584582 PTPDC1A2A3K4 754 aa13.27□□□□□ -0.28
TOP3A-217ENST00000584582 CCDC39Q9UFE4 941 aa13.27□□□□□ -0.28
TOP3A-217ENST00000584582 MTMR6Q9Y217 621 aa13.27□□□□□ -0.28
TOP3A-217ENST00000584582 ERICH2A1L162 156 aa13.27□□□□□ -0.29
TOP3A-217ENST00000584582 CUL4AQ13619 759 aa13.27□□□□□ -0.29
TOP3A-217ENST00000584582 C8orf76Q96K31 380 aa13.27□□□□□ -0.29
TOP3A-217ENST00000584582 CTNNA3Q9UI47 895 aa13.27□□□□□ -0.29
TOP3A-217ENST00000584582 NECTIN1Q15223 517 aa13.27□□□□□ -0.29
TOP3A-217ENST00000584582 HMG20BQ9P0W2 317 aa13.27□□□□□ -0.29
TOP3A-217ENST00000584582 PRC1O43663 620 aa13.26□□□□□ -0.29
TOP3A-217ENST00000584582 FAM98CQ17RN3 349 aaKnown RBP13.26□□□□□ -0.29
TOP3A-217ENST00000584582 GJB4Q9NTQ9 266 aa13.26□□□□□ -0.29
TOP3A-217ENST00000584582 RGPD8O14715 1765 aaPredicted RBP13.26□□□□□ -0.29
TOP3A-217ENST00000584582 SALL3Q9BXA9 1300 aa13.26□□□□□ -0.29
TOP3A-217ENST00000584582 LIG1P18858 919 aa13.26□□□□□ -0.29
TOP3A-217ENST00000584582 DDIT3P35638 169 aa13.26□□□□□ -0.29
TOP3A-217ENST00000584582 MTX1Q13505 466 aa13.26□□□□□ -0.29
TOP3A-217ENST00000584582 HSP90AA4PQ58FG1 418 aa13.26□□□□□ -0.29
TOP3A-217ENST00000584582 DHX32Q7L7V1 743 aaKnown RBP13.26□□□□□ -0.29
TOP3A-217ENST00000584582 RASSF8Q8NHQ8 419 aa13.26□□□□□ -0.29
TOP3A-217ENST00000584582 MARCKSP29966 332 aaPredicted RBP13.26□□□□□ -0.29
TOP3A-217ENST00000584582 LUZP1Q86V48 1076 aa13.26□□□□□ -0.29
TOP3A-217ENST00000584582 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.292e-7■■□□□ 13.3
TOP3A-217ENST00000584582 ERVV-2B6SEH9 535 aa13.25□□□□□ -0.29
TOP3A-217ENST00000584582 IFIT3O14879 490 aaKnown RBP13.25□□□□□ -0.29
TOP3A-217ENST00000584582 MAGEB6Q8N7X4 407 aa13.25□□□□□ -0.29
TOP3A-217ENST00000584582 SCAND2PQ9GZW5 306 aaPredicted RBP13.25□□□□□ -0.29
TOP3A-217ENST00000584582 SEC31BQ9NQW1 1179 aa13.25□□□□□ -0.29
TOP3A-217ENST00000584582 HEG1Q9ULI3 1381 aa13.25□□□□□ -0.29
TOP3A-217ENST00000584582 B4E1Z4 1266 aa13.25□□□□□ -0.29
TOP3A-217ENST00000584582 GPAA1O43292 621 aa13.25□□□□□ -0.29
TOP3A-217ENST00000584582 HSPD1P10809 573 aaKnown RBP13.25□□□□□ -0.29
TOP3A-217ENST00000584582 HSP90AA2PQ14568 343 aaPredicted RBP13.25□□□□□ -0.29
TOP3A-217ENST00000584582 ERBB4Q15303 1308 aa13.25□□□□□ -0.29
TOP3A-217ENST00000584582 GOLGA6L6A8MZA4 724 aa13.25□□□□□ -0.29
TOP3A-217ENST00000584582 SCARF1Q14162 830 aa13.25□□□□□ -0.29
TOP3A-217ENST00000584582 TTC6Q86TZ1 520 aa13.25□□□□□ -0.29
TOP3A-217ENST00000584582 DNAJC25Q9H1X3 360 aa13.25□□□□□ -0.29
TOP3A-217ENST00000584582 INCENPQ9NQS7 918 aa13.25□□□□□ -0.29
TOP3A-217ENST00000584582 DLG5Q8TDM6 1919 aa13.25□□□□□ -0.29
TOP3A-217ENST00000584582 PEAK1Q9H792 1746 aa13.24□□□□□ -0.29
TOP3A-217ENST00000584582 CCDC69A6NI79 296 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms