RNA–Protein interactions for RNA: ENST00000584336.1

CDK12-208, Transcript of cyclin dependent kinase 12, humanhuman

Gene CDK12, Length 1,963 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-208ENST00000584336 ZPR1O75312 459 aa12.66□□□□□ -0.38
CDK12-208ENST00000584336 TRAPPC3LQ5T215 181 aa12.66□□□□□ -0.38
CDK12-208ENST00000584336 DDX46Q7L014 1031 aaKnown RBP12.66□□□□□ -0.38
CDK12-208ENST00000584336 VGLL2Q8N8G2 317 aa12.66□□□□□ -0.38
CDK12-208ENST00000584336 SNRKQ9NRH2 765 aa12.66□□□□□ -0.38
CDK12-208ENST00000584336 C4AP0C0L4 1744 aa12.65□□□□□ -0.38
CDK12-208ENST00000584336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.65□□□□□ -0.38
CDK12-208ENST00000584336 A0A0D9SFI3 127 aa12.65□□□□□ -0.38
CDK12-208ENST00000584336 TXNRD1Q16881 649 aa12.65□□□□□ -0.38
CDK12-208ENST00000584336 PI16Q6UXB8 463 aa12.65□□□□□ -0.38
CDK12-208ENST00000584336 SEC62Q99442 399 aaKnown RBP12.65□□□□□ -0.38
CDK12-208ENST00000584336 FSD1Q9BTV5 496 aa12.65□□□□□ -0.38
CDK12-208ENST00000584336 LSG1Q9H089 658 aaKnown RBP12.65□□□□□ -0.38
CDK12-208ENST00000584336 SLKQ9H2G2 1235 aaPredicted RBP12.65□□□□□ -0.38
CDK12-208ENST00000584336 GPR108Q9NPR9 543 aa12.65□□□□□ -0.38
CDK12-208ENST00000584336 REC8O95072 547 aa12.65□□□□□ -0.38
CDK12-208ENST00000584336 RFC4P35249 363 aa12.65□□□□□ -0.38
CDK12-208ENST00000584336 HAUS7Q99871 368 aa12.65□□□□□ -0.38
CDK12-208ENST00000584336 DAXXQ9UER7 740 aaPredicted RBP12.65□□□□□ -0.38
CDK12-208ENST00000584336 SPEF2Q9C093 1822 aa12.64□□□□□ -0.39
CDK12-208ENST00000584336 GOLIM4O00461 696 aa12.64□□□□□ -0.39
CDK12-208ENST00000584336 CCDC129Q6ZRS4 1044 aa12.64□□□□□ -0.39
CDK12-208ENST00000584336 SETDB2Q96T68 719 aa12.64□□□□□ -0.39
CDK12-208ENST00000584336 DIAPH3Q9NSV4 1193 aa12.64□□□□□ -0.39
CDK12-208ENST00000584336 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
CDK12-208ENST00000584336 RGPD3A6NKT7 1758 aaPredicted RBP12.64□□□□□ -0.39
CDK12-208ENST00000584336 RGPD4Q7Z3J3 1758 aa12.64□□□□□ -0.39
CDK12-208ENST00000584336 NFIXQ14938 502 aa12.63□□□□□ -0.39
CDK12-208ENST00000584336 ATP2B3Q16720 1220 aa12.63□□□□□ -0.39
CDK12-208ENST00000584336 ZNF827Q17R98 1081 aa12.63□□□□□ -0.39
CDK12-208ENST00000584336 ZNF589Q86UQ0 364 aaPredicted RBP12.63□□□□□ -0.39
CDK12-208ENST00000584336 IFIT1P09914 478 aaKnown RBP12.63□□□□□ -0.39
CDK12-208ENST00000584336 BECN1Q14457 450 aa12.63□□□□□ -0.39
CDK12-208ENST00000584336 NBPF5PQ86XG9 351 aaPredicted RBP12.63□□□□□ -0.39
CDK12-208ENST00000584336 CELF1Q92879 486 aaKnown RBP12.63□□□□□ -0.39
CDK12-208ENST00000584336 LRP5O75197 1615 aa12.62□□□□□ -0.39
CDK12-208ENST00000584336 CASZ1Q86V15 1759 aa12.62□□□□□ -0.39
CDK12-208ENST00000584336 PDE8BO95263 885 aa12.62□□□□□ -0.39
CDK12-208ENST00000584336 GTF2E1P29083 439 aaPredicted RBP12.62□□□□□ -0.39
CDK12-208ENST00000584336 CCDC152Q4G0S7 254 aa12.62□□□□□ -0.39
CDK12-208ENST00000584336 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
CDK12-208ENST00000584336 FBXO3Q9UK99 471 aa12.62□□□□□ -0.39
CDK12-208ENST00000584336 ZAP70P43403 619 aa12.61□□□□□ -0.39
CDK12-208ENST00000584336 FKBP4Q02790 459 aaKnown RBP eCLIP12.61□□□□□ -0.39
CDK12-208ENST00000584336 COL9A3Q14050 684 aaPredicted RBP12.61□□□□□ -0.39
CDK12-208ENST00000584336 TTC39AQ5SRH9 613 aa12.61□□□□□ -0.39
CDK12-208ENST00000584336 PAG1Q9NWQ8 432 aa12.61□□□□□ -0.39
CDK12-208ENST00000584336 LAMB2P55268 1798 aa12.61□□□□□ -0.39
CDK12-208ENST00000584336 UBR3Q6ZT12 1888 aa12.61□□□□□ -0.39
CDK12-208ENST00000584336 GYS1P13807 737 aa12.61□□□□□ -0.39
CDK12-208ENST00000584336 FGFR2P21802 821 aa12.61□□□□□ -0.39
CDK12-208ENST00000584336 PHKA1P46020 1223 aa12.61□□□□□ -0.39
CDK12-208ENST00000584336 NBR1Q14596 966 aa12.61□□□□□ -0.39
CDK12-208ENST00000584336 SLC10A5Q5PT55 438 aa12.61□□□□□ -0.39
CDK12-208ENST00000584336 GORABQ5T7V8 394 aa12.61□□□□□ -0.39
CDK12-208ENST00000584336 HSCBQ8IWL3 235 aa12.61□□□□□ -0.39
CDK12-208ENST00000584336 SNX21Q969T3 373 aa12.61□□□□□ -0.39
CDK12-208ENST00000584336 MPHOSPH8Q99549 860 aa12.61□□□□□ -0.39
CDK12-208ENST00000584336 AKAP2Q9Y2D5 859 aa12.61□□□□□ -0.39
CDK12-208ENST00000584336 COL24A1Q17RW2 1714 aa12.6□□□□□ -0.39
CDK12-208ENST00000584336 CPA1P15085 419 aa12.6□□□□□ -0.39
CDK12-208ENST00000584336 HSPA4P34932 840 aa12.6□□□□□ -0.39
CDK12-208ENST00000584336 MCAMP43121 646 aa12.6□□□□□ -0.39
CDK12-208ENST00000584336 CHRNDQ07001 517 aa12.6□□□□□ -0.39
CDK12-208ENST00000584336 SF3B3Q15393 1217 aaKnown RBP12.6□□□□□ -0.39
CDK12-208ENST00000584336 SLC27A3Q5K4L6 730 aa12.6□□□□□ -0.39
CDK12-208ENST00000584336 TAF6LQ9Y6J9 622 aa12.6□□□□□ -0.39
CDK12-208ENST00000584336 TNRC6CQ9HCJ0 1690 aaKnown RBP12.6□□□□□ -0.39
CDK12-208ENST00000584336 RAD50Q92878 1312 aa12.6□□□□□ -0.39
CDK12-208ENST00000584336 TM4SF1P30408 202 aa12.6□□□□□ -0.39
CDK12-208ENST00000584336 SNX14Q9Y5W7 946 aa12.6□□□□□ -0.39
CDK12-208ENST00000584336 IGHMBP2P38935 993 aaKnown RBP12.59□□□□□ -0.39
CDK12-208ENST00000584336 RABEP1Q15276 862 aa12.59□□□□□ -0.39
CDK12-208ENST00000584336 CCDC158Q5M9N0 1113 aa12.59□□□□□ -0.39
CDK12-208ENST00000584336 PRPF40BQ6NWY9 871 aaKnown RBP12.59□□□□□ -0.39
CDK12-208ENST00000584336 NOL8Q76FK4 1167 aaKnown RBP12.59□□□□□ -0.39
CDK12-208ENST00000584336 KBTBD3Q8NAB2 608 aa12.59□□□□□ -0.39
CDK12-208ENST00000584336 UPF3BQ9BZI7 483 aaKnown RBP12.59□□□□□ -0.39
CDK12-208ENST00000584336 ADCK5Q3MIX3 580 aa12.58□□□□□ -0.4
CDK12-208ENST00000584336 CCDC102BQ68D86 513 aa12.58□□□□□ -0.4
CDK12-208ENST00000584336 TPTE2Q6XPS3 522 aa12.58□□□□□ -0.4
CDK12-208ENST00000584336 LARP6Q9BRS8 491 aaKnown RBP12.58□□□□□ -0.4
CDK12-208ENST00000584336 ANP32EQ9BTT0 268 aa12.58□□□□□ -0.4
CDK12-208ENST00000584336 MROH5Q6ZUA9 1318 aa12.58□□□□□ -0.4
CDK12-208ENST00000584336 RTL9Q8NET4 1388 aa12.58□□□□□ -0.4
CDK12-208ENST00000584336 MED23Q9ULK4 1368 aa12.58□□□□□ -0.4
CDK12-208ENST00000584336 A0A0G2JLW4 131 aa12.58□□□□□ -0.4
CDK12-208ENST00000584336 BCAMP50895 628 aa12.58□□□□□ -0.4
CDK12-208ENST00000584336 DDR1Q08345 913 aa12.58□□□□□ -0.4
CDK12-208ENST00000584336 COL23A1Q86Y22 540 aaPredicted RBP12.58□□□□□ -0.4
CDK12-208ENST00000584336 ANKRD18AQ8IVF6 992 aa12.58□□□□□ -0.4
CDK12-208ENST00000584336 RUFY2Q8WXA3 655 aa12.58□□□□□ -0.4
CDK12-208ENST00000584336 NYXQ9GZU5 481 aa12.58□□□□□ -0.4
CDK12-208ENST00000584336 PIH1D3Q9NQM4 214 aaKnown RBP12.58□□□□□ -0.4
CDK12-208ENST00000584336 RBM8AQ9Y5S9 174 aaKnown RBP12.58□□□□□ -0.4
CDK12-208ENST00000584336 CCDC171Q6TFL3 1326 aa12.57□□□□□ -0.4
CDK12-208ENST00000584336 M0R2C6 588 aa12.57□□□□□ -0.4
CDK12-208ENST00000584336 KLRK1P26718 216 aa12.57□□□□□ -0.4
CDK12-208ENST00000584336 NEK4P51957 841 aa12.57□□□□□ -0.4
CDK12-208ENST00000584336 PUM3Q15397 648 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms