RNA–Protein interactions for RNA: ENST00000584261.5

DDX42-218, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 510 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-218ENST00000584261 TTC21BQ7Z4L5 1316 aa8.49□□□□□ -1.05
DDX42-218ENST00000584261 KTN1Q86UP2 1357 aaKnown RBP8.48□□□□□ -1.05
DDX42-218ENST00000584261 USP6P35125 1406 aa8.48□□□□□ -1.05
DDX42-218ENST00000584261 C1QTNF9BB2RNN3 333 aa8.48□□□□□ -1.05
DDX42-218ENST00000584261 ATP5J2-PTCD1G3V325 749 aa8.48□□□□□ -1.05
DDX42-218ENST00000584261 UNC5CLQ8IV45 518 aa8.48□□□□□ -1.05
DDX42-218ENST00000584261 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.48□□□□□ -1.05
DDX42-218ENST00000584261 SUV39H2Q9H5I1 410 aa8.48□□□□□ -1.05
DDX42-218ENST00000584261 PRDM11Q9NQV5 511 aa8.48□□□□□ -1.05
DDX42-218ENST00000584261 RGPD8O14715 1765 aaPredicted RBP8.48□□□□□ -1.05
DDX42-218ENST00000584261 NINLQ9Y2I6 1382 aa8.48□□□□□ -1.05
DDX42-218ENST00000584261 CPSF1Q10570 1443 aaKnown RBP8.47□□□□□ -1.05
DDX42-218ENST00000584261 A0A1W2PRU2 124 aa8.47□□□□□ -1.05
DDX42-218ENST00000584261 GCP02774 474 aa8.47□□□□□ -1.05
DDX42-218ENST00000584261 ZC3H6P61129 1189 aaKnown RBP8.47□□□□□ -1.05
DDX42-218ENST00000584261 RBM6P78332 1123 aaKnown RBP8.47□□□□□ -1.05
DDX42-218ENST00000584261 LINC00114Q6XXX2 140 aa8.47□□□□□ -1.05
DDX42-218ENST00000584261 KLRG1Q96E93 195 aa8.47□□□□□ -1.05
DDX42-218ENST00000584261 POLR3GLQ9BT43 218 aa8.47□□□□□ -1.05
DDX42-218ENST00000584261 NUCKS1Q9H1E3 243 aaKnown RBP8.47□□□□□ -1.05
DDX42-218ENST00000584261 TTC21AQ8NDW8 1320 aa8.47□□□□□ -1.05
DDX42-218ENST00000584261 SLC27A3Q5K4L6 730 aa8.46□□□□□ -1.06
DDX42-218ENST00000584261 EDARADDQ8WWZ3 215 aa8.46□□□□□ -1.06
DDX42-218ENST00000584261 AK7Q96M32 723 aa8.46□□□□□ -1.06
DDX42-218ENST00000584261 USP19O94966 1318 aa8.46□□□□□ -1.06
DDX42-218ENST00000584261 COL22A1Q8NFW1 1626 aaPredicted RBP8.46□□□□□ -1.06
DDX42-218ENST00000584261 SSH2Q76I76 1423 aa8.46□□□□□ -1.06
DDX42-218ENST00000584261 ZBTB7CA1YPR0 619 aa8.45□□□□□ -1.06
DDX42-218ENST00000584261 SOCS7O14512 581 aa8.45□□□□□ -1.06
DDX42-218ENST00000584261 HOXB4P17483 251 aaPredicted RBP8.45□□□□□ -1.06
DDX42-218ENST00000584261 CHRNA2Q15822 529 aa8.45□□□□□ -1.06
DDX42-218ENST00000584261 PPP2R2DQ66LE6 453 aa8.45□□□□□ -1.06
DDX42-218ENST00000584261 NBPF10Q6P3W6 841 aaKnown RBP8.45□□□□□ -1.06
DDX42-218ENST00000584261 CD163Q86VB7 1156 aa8.45□□□□□ -1.06
DDX42-218ENST00000584261 NME9Q86XW9 330 aa8.45□□□□□ -1.06
DDX42-218ENST00000584261 NBPF15Q8N660 670 aa8.45□□□□□ -1.06
DDX42-218ENST00000584261 CFHR5Q9BXR6 569 aa8.45□□□□□ -1.06
DDX42-218ENST00000584261 GRIP2Q9C0E4 1043 aa8.45□□□□□ -1.06
DDX42-218ENST00000584261 BTG4Q9NY30 223 aa8.45□□□□□ -1.06
DDX42-218ENST00000584261 CCDC9Q9Y3X0 531 aaKnown RBP8.45□□□□□ -1.06
DDX42-218ENST00000584261 ITSN1Q15811 1721 aa8.45□□□□□ -1.06
DDX42-218ENST00000584261 A0A1W2PP64 1363 aa8.45□□□□□ -1.06
DDX42-218ENST00000584261 KIAA0232Q92628 1395 aa8.45□□□□□ -1.06
DDX42-218ENST00000584261 BCL9LQ86UU0 1499 aa8.45□□□□□ -1.06
DDX42-218ENST00000584261 TOPAZ1Q8N9V7 1692 aa8.44□□□□□ -1.06
DDX42-218ENST00000584261 F11P03951 625 aa8.44□□□□□ -1.06
DDX42-218ENST00000584261 EVA1CP58658 441 aa8.44□□□□□ -1.06
DDX42-218ENST00000584261 VPS72Q15906 364 aa8.44□□□□□ -1.06
DDX42-218ENST00000584261 KCNH5Q8NCM2 988 aa8.44□□□□□ -1.06
DDX42-218ENST00000584261 EPS8L1Q8TE68 723 aa8.44□□□□□ -1.06
DDX42-218ENST00000584261 GJD4Q96KN9 370 aaPredicted RBP8.44□□□□□ -1.06
DDX42-218ENST00000584261 SEMA6BQ9H3T3 888 aa8.44□□□□□ -1.06
DDX42-218ENST00000584261 TIMMDC1Q9NPL8 285 aa8.44□□□□□ -1.06
DDX42-218ENST00000584261 EDC4Q6P2E9 1401 aaKnown RBP8.44□□□□□ -1.06
DDX42-218ENST00000584261 TRPM3Q9HCF6 1732 aaPredicted RBP8.43□□□□□ -1.06
DDX42-218ENST00000584261 THBS1P07996 1170 aa8.43□□□□□ -1.06
DDX42-218ENST00000584261 STRN4Q9NRL3 753 aa8.43□□□□□ -1.06
DDX42-218ENST00000584261 ANKRD36BQ8N2N9 1353 aa8.43□□□□□ -1.06
DDX42-218ENST00000584261 ATRNO75882 1429 aa8.43□□□□□ -1.06
DDX42-218ENST00000584261 CD163L1Q9NR16 1453 aa8.43□□□□□ -1.06
DDX42-218ENST00000584261 SLIT2O94813 1529 aa8.43□□□□□ -1.06
DDX42-218ENST00000584261 CHRNA4P43681 627 aa8.42□□□□□ -1.06
DDX42-218ENST00000584261 PDE4DQ08499 809 aa8.42□□□□□ -1.06
DDX42-218ENST00000584261 ZMYM1Q5SVZ6 1142 aa8.42□□□□□ -1.06
DDX42-218ENST00000584261 LCE3BQ5TA77 95 aa8.42□□□□□ -1.06
DDX42-218ENST00000584261 SEPT12Q8IYM1 358 aa8.42□□□□□ -1.06
DDX42-218ENST00000584261 COG3Q96JB2 828 aa8.42□□□□□ -1.06
DDX42-218ENST00000584261 NLRP3Q96P20 1036 aa8.42□□□□□ -1.06
DDX42-218ENST00000584261 RSPH6AQ9H0K4 717 aa8.42□□□□□ -1.06
DDX42-218ENST00000584261 GDF2Q9UK05 429 aaPredicted RBP8.42□□□□□ -1.06
DDX42-218ENST00000584261 CPDO75976 1380 aa8.42□□□□□ -1.06
DDX42-218ENST00000584261 USP31Q70CQ4 1352 aa8.42□□□□□ -1.06
DDX42-218ENST00000584261 ALS2Q96Q42 1657 aa8.41□□□□□ -1.06
DDX42-218ENST00000584261 SPATA31C2B4DYI2 1134 aa8.41□□□□□ -1.06
DDX42-218ENST00000584261 AMPD1P23109 780 aa8.41□□□□□ -1.06
DDX42-218ENST00000584261 WDR44Q5JSH3 913 aa8.41□□□□□ -1.06
DDX42-218ENST00000584261 ARHGEF25Q86VW2 580 aa8.41□□□□□ -1.06
DDX42-218ENST00000584261 FYB1O15117 783 aa8.4□□□□□ -1.06
DDX42-218ENST00000584261 DOC2BQ14184 412 aa8.4□□□□□ -1.06
DDX42-218ENST00000584261 KRTAP4-12Q9BQ66 201 aa8.4□□□□□ -1.06
DDX42-218ENST00000584261 GGNBP2Q9H3C7 697 aa8.4□□□□□ -1.06
DDX42-218ENST00000584261 AATKQ6ZMQ8 1374 aa8.39□□□□□ -1.07
DDX42-218ENST00000584261 SPATA31A5Q5VU36 1347 aa8.39□□□□□ -1.07
DDX42-218ENST00000584261 SPATA31A7Q8IWB4 1347 aa8.39□□□□□ -1.07
DDX42-218ENST00000584261 GIGYF1O75420 1035 aaPredicted RBP8.39□□□□□ -1.07
DDX42-218ENST00000584261 LARP1Q6PKG0 1096 aaKnown RBP8.39□□□□□ -1.07
DDX42-218ENST00000584261 TAS1R3Q7RTX0 852 aa8.39□□□□□ -1.07
DDX42-218ENST00000584261 GOLGA6L1Q8N7Z2 621 aa8.39□□□□□ -1.07
DDX42-218ENST00000584261 PANK3Q9H999 370 aa8.39□□□□□ -1.07
DDX42-218ENST00000584261 USP35Q9P2H5 1018 aa8.39□□□□□ -1.07
DDX42-218ENST00000584261 CDK12Q9NYV4 1490 aaPredicted RBP8.38□□□□□ -1.07
DDX42-218ENST00000584261 CGNL1Q0VF96 1302 aa8.38□□□□□ -1.07
DDX42-218ENST00000584261 KIF7Q2M1P5 1343 aa8.38□□□□□ -1.07
DDX42-218ENST00000584261 GNB5O14775 395 aa8.38□□□□□ -1.07
DDX42-218ENST00000584261 CSB-PGBD3P0DP91 1061 aa8.38□□□□□ -1.07
DDX42-218ENST00000584261 CLN3Q13286 438 aa8.38□□□□□ -1.07
DDX42-218ENST00000584261 GPAMQ9HCL2 828 aa8.38□□□□□ -1.07
DDX42-218ENST00000584261 PHF24Q9UPV7 400 aa8.38□□□□□ -1.07
DDX42-218ENST00000584261 RGS12O14924 1447 aa8.37□□□□□ -1.07
DDX42-218ENST00000584261 NSD3Q9BZ95 1437 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms