RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 RTL9Q8NET4 1388 aa27.31■■□□□ 1.96
PPP4R1-228ENST00000584074 CACNA1FO60840 1977 aa27.3■■□□□ 1.96
PPP4R1-228ENST00000584074 SLFN5Q08AF3 891 aa27.3■■□□□ 1.96
PPP4R1-228ENST00000584074 GGA1Q9UJY5 639 aa27.3■■□□□ 1.96
PPP4R1-228ENST00000584074 PASKQ96RG2 1323 aa27.3■■□□□ 1.96
PPP4R1-228ENST00000584074 CNTROBQ8N137 903 aa27.29■■□□□ 1.96
PPP4R1-228ENST00000584074 CDCA7LQ96GN5 454 aa27.29■■□□□ 1.96
PPP4R1-228ENST00000584074 ZC3H12CQ9C0D7 883 aaKnown RBP27.29■■□□□ 1.96
PPP4R1-228ENST00000584074 ECE2O60344 883 aa27.28■■□□□ 1.96
PPP4R1-228ENST00000584074 USP50Q70EL3 339 aaPredicted RBP27.28■■□□□ 1.96
PPP4R1-228ENST00000584074 BCL2L13Q9BXK5 485 aa27.28■■□□□ 1.96
PPP4R1-228ENST00000584074 KCNQ5Q9NR82 932 aa27.28■■□□□ 1.96
PPP4R1-228ENST00000584074 XDHP47989 1333 aa27.27■■□□□ 1.96
PPP4R1-228ENST00000584074 FAM161AQ3B820 660 aa27.27■■□□□ 1.96
PPP4R1-228ENST00000584074 ADARB2Q9NS39 739 aaKnown RBP27.27■■□□□ 1.96
PPP4R1-228ENST00000584074 BSDC1Q9NW68 430 aaPredicted RBP27.27■■□□□ 1.96
PPP4R1-228ENST00000584074 CSF1RP07333 972 aa27.26■■□□□ 1.95
PPP4R1-228ENST00000584074 SLC4A10Q6U841 1118 aa27.26■■□□□ 1.95
PPP4R1-228ENST00000584074 CREBZFQ9NS37 354 aa27.26■■□□□ 1.95
PPP4R1-228ENST00000584074 MINPP1Q9UNW1 487 aa27.26■■□□□ 1.95
PPP4R1-228ENST00000584074 ZBTB12Q9Y330 459 aaPredicted RBP27.26■■□□□ 1.95
PPP4R1-228ENST00000584074 WTIPA6NIX2 430 aaPredicted RBP27.25■■□□□ 1.95
PPP4R1-228ENST00000584074 PSMD14O00487 310 aa27.25■■□□□ 1.95
PPP4R1-228ENST00000584074 ITGA6P23229 1130 aa27.25■■□□□ 1.95
PPP4R1-228ENST00000584074 MRPL50Q8N5N7 158 aaKnown RBP27.25■■□□□ 1.95
PPP4R1-228ENST00000584074 PCNTO95613 3336 aa27.24■■□□□ 1.95
PPP4R1-228ENST00000584074 JMYQ8N9B5 988 aa27.24■■□□□ 1.95
PPP4R1-228ENST00000584074 MYH3P11055 1940 aa27.24■■□□□ 1.95
PPP4R1-228ENST00000584074 SHTN1A0MZ66 631 aa27.23■■□□□ 1.95
PPP4R1-228ENST00000584074 ATP2B4P23634 1241 aa27.23■■□□□ 1.95
PPP4R1-228ENST00000584074 FOXO4P98177 505 aa27.23■■□□□ 1.95
PPP4R1-228ENST00000584074 CNOT7Q9UIV1 285 aaKnown RBP27.23■■□□□ 1.95
PPP4R1-228ENST00000584074 G3V3G9 751 aa27.22■■□□□ 1.95
PPP4R1-228ENST00000584074 GRM8O00222 908 aa27.22■■□□□ 1.95
PPP4R1-228ENST00000584074 IGHMBP2P38935 993 aaKnown RBP27.22■■□□□ 1.95
PPP4R1-228ENST00000584074 DCAF8Q5TAQ9 597 aa27.22■■□□□ 1.95
PPP4R1-228ENST00000584074 SSH1Q8WYL5 1049 aa27.22■■□□□ 1.95
PPP4R1-228ENST00000584074 SRCIN1Q9C0H9 1055 aa27.21■■□□□ 1.95
PPP4R1-228ENST00000584074 TMEM88BA6NKF7 163 aa27.2■■□□□ 1.94
PPP4R1-228ENST00000584074 ALDH1L1O75891 902 aa27.2■■□□□ 1.94
PPP4R1-228ENST00000584074 MICALL2Q8IY33 904 aa27.2■■□□□ 1.94
PPP4R1-228ENST00000584074 TRMT2AQ8IZ69 625 aaKnown RBP27.2■■□□□ 1.94
PPP4R1-228ENST00000584074 DPF2Q92785 391 aa27.2■■□□□ 1.94
PPP4R1-228ENST00000584074 C9orf78Q9NZ63 289 aaPredicted RBP27.2■■□□□ 1.94
PPP4R1-228ENST00000584074 HIRAP54198 1017 aaPredicted RBP27.19■■□□□ 1.94
PPP4R1-228ENST00000584074 FMR1Q06787 632 aaKnown RBP eCLIP27.19■■□□□ 1.942e-6■■■■□ 20.3
PPP4R1-228ENST00000584074 EPHA10Q5JZY3 1008 aa27.19■■□□□ 1.94
PPP4R1-228ENST00000584074 TRPM4Q8TD43 1214 aa27.19■■□□□ 1.94
PPP4R1-228ENST00000584074 MPHOSPH8Q99549 860 aa27.19■■□□□ 1.94
PPP4R1-228ENST00000584074 MKRN1Q9UHC7 482 aaKnown RBP27.19■■□□□ 1.94
PPP4R1-228ENST00000584074 SPEF2Q9C093 1822 aa27.18■■□□□ 1.94
PPP4R1-228ENST00000584074 ANKRD18BA2A2Z9 1011 aa27.18■■□□□ 1.94
PPP4R1-228ENST00000584074 H7C1D1 291 aa27.18■■□□□ 1.94
PPP4R1-228ENST00000584074 CCT4P50991 539 aaKnown RBP27.18■■□□□ 1.94
PPP4R1-228ENST00000584074 CHMP3Q9Y3E7 222 aa27.18■■□□□ 1.94
PPP4R1-228ENST00000584074 VIL1P09327 827 aaKnown RBP27.17■■□□□ 1.94
PPP4R1-228ENST00000584074 LMBR1LQ6UX01 489 aa27.17■■□□□ 1.94
PPP4R1-228ENST00000584074 TRAF5O00463 557 aa27.16■■□□□ 1.94
PPP4R1-228ENST00000584074 RPS12P25398 132 aaKnown RBP27.16■■□□□ 1.94
PPP4R1-228ENST00000584074 IFIT5Q13325 482 aaKnown RBP27.16■■□□□ 1.94
PPP4R1-228ENST00000584074 PTPRCP08575 1304 aa27.16■■□□□ 1.94
PPP4R1-228ENST00000584074 MED23Q9ULK4 1368 aa27.15■■□□□ 1.94
PPP4R1-228ENST00000584074 SAMD7Q7Z3H4 446 aa27.15■■□□□ 1.94
PPP4R1-228ENST00000584074 ANKRD2Q9GZV1 360 aa27.15■■□□□ 1.94
PPP4R1-228ENST00000584074 PGAP2Q9UHJ9 254 aa27.15■■□□□ 1.94
PPP4R1-228ENST00000584074 LEMD3Q9Y2U8 911 aa27.15■■□□□ 1.94
PPP4R1-228ENST00000584074 MIER1Q8N108 512 aa27.14■■□□□ 1.94
PPP4R1-228ENST00000584074 SCN9AQ15858 1988 aa27.13■■□□□ 1.93
PPP4R1-228ENST00000584074 CNTNAP1P78357 1384 aa27.13■■□□□ 1.93
PPP4R1-228ENST00000584074 EGFRP00533 1210 aa27.13■■□□□ 1.93
PPP4R1-228ENST00000584074 NBPF7P0C2Y1 421 aaPredicted RBP27.13■■□□□ 1.93
PPP4R1-228ENST00000584074 CHRNDQ07001 517 aa27.13■■□□□ 1.93
PPP4R1-228ENST00000584074 ALDH1L2Q3SY69 923 aa27.13■■□□□ 1.93
PPP4R1-228ENST00000584074 TBC1D10BQ4KMP7 808 aaPredicted RBP27.13■■□□□ 1.93
PPP4R1-228ENST00000584074 DIEXFQ68CQ4 756 aaKnown RBP27.13■■□□□ 1.93
PPP4R1-228ENST00000584074 PODNQ7Z5L7 613 aa27.13■■□□□ 1.93
PPP4R1-228ENST00000584074 TXNRD3Q86VQ6 643 aa27.13■■□□□ 1.93
PPP4R1-228ENST00000584074 ZC3H15Q8WU90 426 aaKnown RBP27.13■■□□□ 1.93
PPP4R1-228ENST00000584074 ZNF804BA4D1E1 1349 aa27.13■■□□□ 1.93
PPP4R1-228ENST00000584074 SUCLG2Q96I99 432 aa27.12■■□□□ 1.93
PPP4R1-228ENST00000584074 GLIS2Q9BZE0 524 aaPredicted RBP27.12■■□□□ 1.93
PPP4R1-228ENST00000584074 SMC4Q9NTJ3 1288 aa27.12■■□□□ 1.93
PPP4R1-228ENST00000584074 KLRK1P26718 216 aa27.11■■□□□ 1.93
PPP4R1-228ENST00000584074 CCDC57Q2TAC2 916 aa27.11■■□□□ 1.93
PPP4R1-228ENST00000584074 RBM26Q5T8P6 1007 aaKnown RBP27.11■■□□□ 1.93
PPP4R1-228ENST00000584074 RSBN1LQ6PCB5 846 aaPredicted RBP27.11■■□□□ 1.93
PPP4R1-228ENST00000584074 KAZALD1Q96I82 304 aa27.11■■□□□ 1.93
PPP4R1-228ENST00000584074 ZNF594Q96JF6 807 aaPredicted RBP27.11■■□□□ 1.93
PPP4R1-228ENST00000584074 CST9Q5W186 159 aa27.1■■□□□ 1.93
PPP4R1-228ENST00000584074 HELBQ8NG08 1087 aaPredicted RBP27.1■■□□□ 1.93
PPP4R1-228ENST00000584074 UTYO14607 1347 aa27.1■■□□□ 1.93
PPP4R1-228ENST00000584074 USP17L3A6NCW0 530 aa27.09■■□□□ 1.93
PPP4R1-228ENST00000584074 USP17L4A6NCW7 530 aa27.09■■□□□ 1.93
PPP4R1-228ENST00000584074 SNAP23O00161 211 aa27.09■■□□□ 1.93
PPP4R1-228ENST00000584074 TAF5LO75529 589 aa27.09■■□□□ 1.93
PPP4R1-228ENST00000584074 USP17L1Q7RTZ2 530 aa27.09■■□□□ 1.93
PPP4R1-228ENST00000584074 KCNJ4P48050 445 aa27.08■■□□□ 1.93
PPP4R1-228ENST00000584074 TAF7LQ5H9L4 462 aa27.08■■□□□ 1.93
PPP4R1-228ENST00000584074 AGBL3Q8NEM8 1001 aa27.08■■□□□ 1.93
PPP4R1-228ENST00000584074 GMLQ99445 158 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms