RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 HYPKQ9NX55 129 aa26.55■■□□□ 1.84
SRSF1-206ENST00000583741 IRS4O14654 1257 aaPredicted RBP26.54■■□□□ 1.84
SRSF1-206ENST00000583741 ADAMTS8Q9UP79 889 aa26.54■■□□□ 1.84
SRSF1-206ENST00000583741 TRIM28Q13263 835 aaKnown RBP26.53■■□□□ 1.84
SRSF1-206ENST00000583741 WDR43Q15061 677 aaKnown RBP eCLIP26.53■■□□□ 1.84
SRSF1-206ENST00000583741 KRT26Q7Z3Y9 468 aa26.53■■□□□ 1.84
SRSF1-206ENST00000583741 TBC1D16Q8TBP0 767 aa26.53■■□□□ 1.84
SRSF1-206ENST00000583741 CFAP44Q96MT7 982 aa26.53■■□□□ 1.84
SRSF1-206ENST00000583741 MBIPQ9NS73 344 aa26.53■■□□□ 1.84
SRSF1-206ENST00000583741 NOGQ13253 232 aa26.52■■□□□ 1.84
SRSF1-206ENST00000583741 ADM5C9JUS6 153 aa26.51■■□□□ 1.83
SRSF1-206ENST00000583741 RPS12P25398 132 aaKnown RBP26.51■■□□□ 1.83
SRSF1-206ENST00000583741 RPS8P62241 208 aaKnown RBP26.51■■□□□ 1.83
SRSF1-206ENST00000583741 EYA3Q99504 573 aa26.51■■□□□ 1.83
SRSF1-206ENST00000583741 MCOLN1Q9GZU1 580 aa26.51■■□□□ 1.83
SRSF1-206ENST00000583741 RBM26Q5T8P6 1007 aaKnown RBP26.5■■□□□ 1.83
SRSF1-206ENST00000583741 SEC31BQ9NQW1 1179 aa26.5■■□□□ 1.83
SRSF1-206ENST00000583741 FAM155AB1AL88 458 aaPredicted RBP26.49■■□□□ 1.83
SRSF1-206ENST00000583741 ZBTB38Q8NAP3 1195 aaPredicted RBP26.49■■□□□ 1.83
SRSF1-206ENST00000583741 PHAXQ9H814 394 aaKnown RBP26.49■■□□□ 1.83
SRSF1-206ENST00000583741 PSME4Q14997 1843 aa26.48■■□□□ 1.83
SRSF1-206ENST00000583741 RGS19P49795 217 aa26.48■■□□□ 1.83
SRSF1-206ENST00000583741 RIC3Q7Z5B4 369 aa26.48■■□□□ 1.83
SRSF1-206ENST00000583741 GBA2Q9HCG7 927 aaPredicted RBP26.48■■□□□ 1.83
SRSF1-206ENST00000583741 ZNF853P0CG23 659 aa26.47■■□□□ 1.83
SRSF1-206ENST00000583741 KIF4BQ2VIQ3 1234 aa26.47■■□□□ 1.83
SRSF1-206ENST00000583741 RGMBQ6NW40 437 aa26.47■■□□□ 1.83
SRSF1-206ENST00000583741 DCPSQ96C86 337 aaKnown RBP26.47■■□□□ 1.83
SRSF1-206ENST00000583741 PODXL2Q9NZ53 605 aa26.47■■□□□ 1.83
SRSF1-206ENST00000583741 ASTN2O75129 1339 aaPredicted RBP26.47■■□□□ 1.83
SRSF1-206ENST00000583741 TNRC18O15417 2968 aaPredicted RBP26.46■■□□□ 1.83
SRSF1-206ENST00000583741 UFL1O94874 794 aa26.46■■□□□ 1.83
SRSF1-206ENST00000583741 VIL1P09327 827 aaKnown RBP26.46■■□□□ 1.83
SRSF1-206ENST00000583741 MLLT1Q03111 559 aaPredicted RBP26.46■■□□□ 1.83
SRSF1-206ENST00000583741 GOLGA2Q08379 1002 aa26.46■■□□□ 1.83
SRSF1-206ENST00000583741 ZC3H12CQ9C0D7 883 aaKnown RBP26.45■■□□□ 1.82
SRSF1-206ENST00000583741 GGA3Q9NZ52 723 aa26.45■■□□□ 1.82
SRSF1-206ENST00000583741 DGKZQ13574 1117 aa26.44■■□□□ 1.82
SRSF1-206ENST00000583741 C2orf69Q8N8R5 385 aa26.44■■□□□ 1.82
SRSF1-206ENST00000583741 MYD88Q99836 296 aa26.44■■□□□ 1.82
SRSF1-206ENST00000583741 ANKIB1Q9P2G1 1089 aa26.44■■□□□ 1.82
SRSF1-206ENST00000583741 ELL2O00472 640 aaPredicted RBP26.43■■□□□ 1.82
SRSF1-206ENST00000583741 JARID2Q92833 1246 aaPredicted RBP26.43■■□□□ 1.82
SRSF1-206ENST00000583741 CCDC85AQ96PX6 553 aaPredicted RBP26.42■■□□□ 1.82
SRSF1-206ENST00000583741 GGA1Q9UJY5 639 aa26.42■■□□□ 1.82
SRSF1-206ENST00000583741 ZNF609O15014 1411 aa26.42■■□□□ 1.82
SRSF1-206ENST00000583741 AKAP11Q9UKA4 1901 aa26.42■■□□□ 1.82
SRSF1-206ENST00000583741 PCCAP05165 728 aaPredicted RBP26.41■■□□□ 1.82
SRSF1-206ENST00000583741 ZNF157P51786 506 aaPredicted RBP26.41■■□□□ 1.82
SRSF1-206ENST00000583741 KIF23Q02241 960 aaPredicted RBP26.41■■□□□ 1.82
SRSF1-206ENST00000583741 CCDC152Q4G0S7 254 aa26.41■■□□□ 1.82
SRSF1-206ENST00000583741 SULF1Q8IWU6 871 aa26.41■■□□□ 1.82
SRSF1-206ENST00000583741 CCDC191Q8NCU4 936 aa26.41■■□□□ 1.82
SRSF1-206ENST00000583741 IFT57Q9NWB7 429 aa26.41■■□□□ 1.82
SRSF1-206ENST00000583741 ZNF280AP59817 542 aaPredicted RBP26.4■■□□□ 1.82
SRSF1-206ENST00000583741 CCDC102AQ96A19 550 aa26.4■■□□□ 1.82
SRSF1-206ENST00000583741 CDCA5Q96FF9 252 aa26.4■■□□□ 1.82
SRSF1-206ENST00000583741 SPEF2Q9C093 1822 aa26.4■■□□□ 1.82
SRSF1-206ENST00000583741 G3V3G9 751 aa26.39■■□□□ 1.82
SRSF1-206ENST00000583741 APAF1O14727 1248 aa26.39■■□□□ 1.82
SRSF1-206ENST00000583741 HSP90B1P14625 803 aaKnown RBP26.39■■□□□ 1.82
SRSF1-206ENST00000583741 DCAF8Q5TAQ9 597 aa26.39■■□□□ 1.82
SRSF1-206ENST00000583741 PDE8AO60658 829 aa26.38■■□□□ 1.81
SRSF1-206ENST00000583741 RSBN1LQ6PCB5 846 aaPredicted RBP26.38■■□□□ 1.81
SRSF1-206ENST00000583741 C8orf58Q8NAV2 365 aa26.38■■□□□ 1.81
SRSF1-206ENST00000583741 CWC25Q9NXE8 425 aaPredicted RBP26.38■■□□□ 1.81
SRSF1-206ENST00000583741 SAGE1Q9NXZ1 904 aa26.38■■□□□ 1.81
SRSF1-206ENST00000583741 SLC10A3P09131 477 aa26.37■■□□□ 1.81
SRSF1-206ENST00000583741 GNAI1P63096 354 aa26.37■■□□□ 1.81
SRSF1-206ENST00000583741 ANGEL2Q5VTE6 544 aaKnown RBP26.37■■□□□ 1.81
SRSF1-206ENST00000583741 FAM9BQ8IZU0 186 aa26.37■■□□□ 1.81
SRSF1-206ENST00000583741 AGBL3Q8NEM8 1001 aa26.37■■□□□ 1.81
SRSF1-206ENST00000583741 ZNF646O15015 1829 aaPredicted RBP26.37■■□□□ 1.81
SRSF1-206ENST00000583741 MYH3P11055 1940 aa26.37■■□□□ 1.81
SRSF1-206ENST00000583741 XDHP47989 1333 aa26.37■■□□□ 1.81
SRSF1-206ENST00000583741 SLC34A2O95436 690 aa26.36■■□□□ 1.81
SRSF1-206ENST00000583741 SCARF1Q14162 830 aa26.36■■□□□ 1.81
SRSF1-206ENST00000583741 GMLQ99445 158 aa26.36■■□□□ 1.81
SRSF1-206ENST00000583741 METTL22Q9BUU2 404 aaPredicted RBP26.36■■□□□ 1.81
SRSF1-206ENST00000583741 RNF186Q9NXI6 227 aa26.36■■□□□ 1.81
SRSF1-206ENST00000583741 TRPA1O75762 1119 aa26.36■■□□□ 1.81
SRSF1-206ENST00000583741 WTIPA6NIX2 430 aaPredicted RBP26.35■■□□□ 1.81
SRSF1-206ENST00000583741 ANKRD18AQ8IVF6 992 aa26.35■■□□□ 1.81
SRSF1-206ENST00000583741 PAPPA2Q9BXP8 1791 aa26.35■■□□□ 1.81
SRSF1-206ENST00000583741 CSRNP1Q96S65 589 aa26.34■■□□□ 1.81
SRSF1-206ENST00000583741 MYOZ2Q9NPC6 264 aa26.33■■□□□ 1.81
SRSF1-206ENST00000583741 SCAF8Q9UPN6 1271 aaKnown RBP26.33■■□□□ 1.81
SRSF1-206ENST00000583741 USP17L8P0C7I0 530 aa26.32■■□□□ 1.8
SRSF1-206ENST00000583741 CALD1Q05682 793 aaKnown RBP26.32■■□□□ 1.8
SRSF1-206ENST00000583741 RASAL3Q86YV0 1011 aa26.32■■□□□ 1.8
SRSF1-206ENST00000583741 YTHDC1Q96MU7 727 aaKnown RBP26.32■■□□□ 1.8
SRSF1-206ENST00000583741 MAP3K2Q9Y2U5 619 aa26.32■■□□□ 1.8
SRSF1-206ENST00000583741 PDE4DIPQ5VU43 2346 aa26.31■■□□□ 1.8
SRSF1-206ENST00000583741 DDX58O95786 925 aaKnown RBP26.31■■□□□ 1.8
SRSF1-206ENST00000583741 ATP2B4P23634 1241 aa26.31■■□□□ 1.8
SRSF1-206ENST00000583741 CTSWP56202 376 aa26.31■■□□□ 1.8
SRSF1-206ENST00000583741 TSPYL6Q8N831 410 aa26.31■■□□□ 1.8
SRSF1-206ENST00000583741 IGKV5-2P06315 115 aa26.3■■□□□ 1.8
SRSF1-206ENST00000583741 CCDC30Q5VVM6 783 aa26.3■■□□□ 1.8
SRSF1-206ENST00000583741 USP17L3A6NCW0 530 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms