RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 EYA3Q99504 573 aa11.55□□□□□ -0.56
UBBP4-201ENST00000583708 RWDD1Q9H446 243 aaPredicted RBP11.55□□□□□ -0.56
UBBP4-201ENST00000583708 GPR108Q9NPR9 543 aa11.55□□□□□ -0.56
UBBP4-201ENST00000583708 CEP126Q9P2H0 1117 aa11.55□□□□□ -0.56
UBBP4-201ENST00000583708 MINPP1Q9UNW1 487 aa11.55□□□□□ -0.56
UBBP4-201ENST00000583708 AKAP2Q9Y2D5 859 aa11.55□□□□□ -0.56
UBBP4-201ENST00000583708 ZBTB22O15209 634 aa11.54□□□□□ -0.56
UBBP4-201ENST00000583708 C21orf2O43822 256 aa11.54□□□□□ -0.56
UBBP4-201ENST00000583708 UBE4AQ14139 1066 aa11.54□□□□□ -0.56
UBBP4-201ENST00000583708 DPP8Q6V1X1 898 aaPredicted RBP11.54□□□□□ -0.56
UBBP4-201ENST00000583708 C15orf52Q6ZUT6 534 aaKnown RBP11.54□□□□□ -0.56
UBBP4-201ENST00000583708 CCDC85AQ96PX6 553 aaPredicted RBP11.54□□□□□ -0.56
UBBP4-201ENST00000583708 DLEC1Q9Y238 1755 aa11.54□□□□□ -0.56
UBBP4-201ENST00000583708 PNMA6EA0A0J9YXQ4 647 aa11.53□□□□□ -0.56
UBBP4-201ENST00000583708 SURF6O75683 361 aaKnown RBP11.53□□□□□ -0.56
UBBP4-201ENST00000583708 FKBP4Q02790 459 aaKnown RBP eCLIP11.53□□□□□ -0.56
UBBP4-201ENST00000583708 EXOC6Q8TAG9 804 aa11.53□□□□□ -0.56
UBBP4-201ENST00000583708 GCC1Q96CN9 775 aa11.53□□□□□ -0.56
UBBP4-201ENST00000583708 DCTPP1Q9H773 170 aa11.53□□□□□ -0.56
UBBP4-201ENST00000583708 ANKIB1Q9P2G1 1089 aa11.53□□□□□ -0.56
UBBP4-201ENST00000583708 GGA1Q9UJY5 639 aa11.53□□□□□ -0.56
UBBP4-201ENST00000583708 TNRC6CQ9HCJ0 1690 aaKnown RBP11.52□□□□□ -0.56
UBBP4-201ENST00000583708 KIAA1551Q9HCM1 1747 aa11.52□□□□□ -0.56
UBBP4-201ENST00000583708 PDE8BO95263 885 aa11.52□□□□□ -0.57
UBBP4-201ENST00000583708 CHRNDQ07001 517 aa11.52□□□□□ -0.57
UBBP4-201ENST00000583708 METTL24Q5JXM2 366 aa11.52□□□□□ -0.57
UBBP4-201ENST00000583708 ARHGAP27Q6ZUM4 889 aa11.52□□□□□ -0.57
UBBP4-201ENST00000583708 SIRT2Q8IXJ6 389 aa11.52□□□□□ -0.57
UBBP4-201ENST00000583708 TAOK3Q9H2K8 898 aa11.52□□□□□ -0.57
UBBP4-201ENST00000583708 NSFL1CQ9UNZ2 370 aaKnown RBP11.52□□□□□ -0.57
UBBP4-201ENST00000583708 PCDHB15Q9Y5E8 787 aa11.52□□□□□ -0.57
UBBP4-201ENST00000583708 OS9Q13438 667 aaPredicted RBP11.51□□□□□ -0.57
UBBP4-201ENST00000583708 PUM3Q15397 648 aaKnown RBP11.51□□□□□ -0.57
UBBP4-201ENST00000583708 ATG9AQ7Z3C6 839 aa11.51□□□□□ -0.57
UBBP4-201ENST00000583708 LPIN2Q92539 896 aa11.51□□□□□ -0.57
UBBP4-201ENST00000583708 KIF1BPQ96EK5 621 aa11.51□□□□□ -0.57
UBBP4-201ENST00000583708 ZNF594Q96JF6 807 aaPredicted RBP11.51□□□□□ -0.57
UBBP4-201ENST00000583708 ZC3H12CQ9C0D7 883 aaKnown RBP11.51□□□□□ -0.57
UBBP4-201ENST00000583708 C1orf115Q9H7X2 142 aa11.51□□□□□ -0.57
UBBP4-201ENST00000583708 ZC3H4Q9UPT8 1303 aaKnown RBP11.51□□□□□ -0.57
UBBP4-201ENST00000583708 IFIT1P09914 478 aaKnown RBP11.5□□□□□ -0.57
UBBP4-201ENST00000583708 LMNB1P20700 586 aa11.5□□□□□ -0.57
UBBP4-201ENST00000583708 KCNJ4P48050 445 aa11.5□□□□□ -0.57
UBBP4-201ENST00000583708 GPSM2P81274 684 aa11.5□□□□□ -0.57
UBBP4-201ENST00000583708 TBC1D16Q8TBP0 767 aa11.5□□□□□ -0.57
UBBP4-201ENST00000583708 ZNF804BA4D1E1 1349 aa11.5□□□□□ -0.57
UBBP4-201ENST00000583708 BRCA1P38398 1863 aaKnown RBP11.5□□□□□ -0.57
UBBP4-201ENST00000583708 COL11A2P13942 1736 aaPredicted RBP11.49□□□□□ -0.57
UBBP4-201ENST00000583708 SLX4Q8IY92 1834 aa11.49□□□□□ -0.57
UBBP4-201ENST00000583708 ARFGEF1Q9Y6D6 1849 aa11.49□□□□□ -0.57
UBBP4-201ENST00000583708 C6orf229H3BNL8 230 aa11.49□□□□□ -0.57
UBBP4-201ENST00000583708 IGSF3O75054 1194 aa11.49□□□□□ -0.57
UBBP4-201ENST00000583708 SLC5A1P13866 664 aa11.49□□□□□ -0.57
UBBP4-201ENST00000583708 YBX3P16989 372 aaKnown RBP eCLIP11.49□□□□□ -0.571e-7■■□□□ 13
UBBP4-201ENST00000583708 MMP14P50281 582 aa11.49□□□□□ -0.57
UBBP4-201ENST00000583708 KIAA2012Q0VF49 1180 aa11.49□□□□□ -0.57
UBBP4-201ENST00000583708 WASHC4Q2M389 1173 aa11.49□□□□□ -0.57
UBBP4-201ENST00000583708 LRRC24Q50LG9 513 aa11.49□□□□□ -0.57
UBBP4-201ENST00000583708 PODNQ7Z5L7 613 aa11.49□□□□□ -0.57
UBBP4-201ENST00000583708 VGLL2Q8N8G2 317 aa11.49□□□□□ -0.57
UBBP4-201ENST00000583708 PUS3Q9BZE2 481 aaKnown RBP11.49□□□□□ -0.57
UBBP4-201ENST00000583708 ZBTB47Q9UFB7 747 aaPredicted RBP11.49□□□□□ -0.57
UBBP4-201ENST00000583708 SNED1Q8TER0 1413 aa11.49□□□□□ -0.57
UBBP4-201ENST00000583708 NFKBIEO00221 500 aa11.48□□□□□ -0.57
UBBP4-201ENST00000583708 UFL1O94874 794 aa11.48□□□□□ -0.57
UBBP4-201ENST00000583708 FGFR2P21802 821 aa11.48□□□□□ -0.57
UBBP4-201ENST00000583708 IARSP41252 1262 aaKnown RBP11.48□□□□□ -0.57
UBBP4-201ENST00000583708 CAVIN4Q5BKX8 364 aa11.48□□□□□ -0.57
UBBP4-201ENST00000583708 PELP1Q8IZL8 1130 aaKnown RBP11.48□□□□□ -0.57
UBBP4-201ENST00000583708 CLASRPQ8N2M8 674 aaKnown RBP11.48□□□□□ -0.57
UBBP4-201ENST00000583708 KLHDC4Q8TBB5 520 aa11.48□□□□□ -0.57
UBBP4-201ENST00000583708 JDP2Q8WYK2 163 aa11.48□□□□□ -0.57
UBBP4-201ENST00000583708 LRRCC1Q9C099 1032 aa11.48□□□□□ -0.57
UBBP4-201ENST00000583708 COA1Q9GZY4 146 aa11.48□□□□□ -0.57
UBBP4-201ENST00000583708 SIL1Q9H173 461 aa11.48□□□□□ -0.57
UBBP4-201ENST00000583708 GNL3LQ9NVN8 582 aaKnown RBP11.48□□□□□ -0.57
UBBP4-201ENST00000583708 POLLQ9UGP5 575 aa11.48□□□□□ -0.57
UBBP4-201ENST00000583708 PA2G4Q9UQ80 394 aaKnown RBP11.48□□□□□ -0.57
UBBP4-201ENST00000583708 MED23Q9ULK4 1368 aa11.48□□□□□ -0.57
UBBP4-201ENST00000583708 SASH1O94885 1247 aa11.47□□□□□ -0.57
UBBP4-201ENST00000583708 ATP2B3Q16720 1220 aa11.47□□□□□ -0.57
UBBP4-201ENST00000583708 ZNF804AQ7Z570 1209 aa11.47□□□□□ -0.57
UBBP4-201ENST00000583708 SMC5Q8IY18 1101 aa11.47□□□□□ -0.57
UBBP4-201ENST00000583708 RHPN1Q8TCX5 695 aa11.47□□□□□ -0.57
UBBP4-201ENST00000583708 ZNF219Q9P2Y4 722 aaPredicted RBP11.47□□□□□ -0.57
UBBP4-201ENST00000583708 LRRC37AA6NMS7 1700 aa11.46□□□□□ -0.57
UBBP4-201ENST00000583708 G3V3G9 751 aa11.46□□□□□ -0.57
UBBP4-201ENST00000583708 SEMA3EO15041 775 aa11.46□□□□□ -0.57
UBBP4-201ENST00000583708 HIBADHP31937 336 aaKnown RBP11.46□□□□□ -0.57
UBBP4-201ENST00000583708 TFCP2Q12800 502 aa11.46□□□□□ -0.57
UBBP4-201ENST00000583708 DCAF8Q5TAQ9 597 aa11.46□□□□□ -0.57
UBBP4-201ENST00000583708 FBXO33Q7Z6M2 555 aa11.46□□□□□ -0.57
UBBP4-201ENST00000583708 LARGE2Q8N3Y3 721 aa11.46□□□□□ -0.57
UBBP4-201ENST00000583708 ZNF512BQ96KM6 892 aaPredicted RBP11.46□□□□□ -0.57
UBBP4-201ENST00000583708 PPP4R2Q9NY27 417 aa11.46□□□□□ -0.57
UBBP4-201ENST00000583708 PPIP5K2O43314 1243 aa11.45□□□□□ -0.58
UBBP4-201ENST00000583708 TAF5LO75529 589 aa11.45□□□□□ -0.58
UBBP4-201ENST00000583708 TNNI3KQ59H18 835 aa11.45□□□□□ -0.58
UBBP4-201ENST00000583708 CCDC158Q5M9N0 1113 aa11.45□□□□□ -0.58
UBBP4-201ENST00000583708 NIM1KQ8IY84 436 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms