RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 HSP90B1P14625 803 aaKnown RBP14.64□□□□□ -0.07
CASC3-208ENST00000583649 ZNF280AP59817 542 aaPredicted RBP14.64□□□□□ -0.07
CASC3-208ENST00000583649 ARMC9Q7Z3E5 817 aa14.64□□□□□ -0.07
CASC3-208ENST00000583649 NLRP10Q86W26 655 aa14.64□□□□□ -0.07
CASC3-208ENST00000583649 USP17L8P0C7I0 530 aa14.63□□□□□ -0.07
CASC3-208ENST00000583649 ARHGEF6Q15052 776 aa14.63□□□□□ -0.07
CASC3-208ENST00000583649 OGFOD1Q8N543 542 aa14.63□□□□□ -0.07
CASC3-208ENST00000583649 ERO1AQ96HE7 468 aa14.63□□□□□ -0.07
CASC3-208ENST00000583649 MYOZ2Q9NPC6 264 aa14.63□□□□□ -0.07
CASC3-208ENST00000583649 EIF2S2P20042 333 aaKnown RBP14.62□□□□□ -0.07
CASC3-208ENST00000583649 OTUD7BQ6GQQ9 843 aa14.62□□□□□ -0.07
CASC3-208ENST00000583649 RSBN1LQ6PCB5 846 aaPredicted RBP14.62□□□□□ -0.07
CASC3-208ENST00000583649 PNNQ9H307 717 aaKnown RBP14.62□□□□□ -0.07
CASC3-208ENST00000583649 ANKIB1Q9P2G1 1089 aa14.62□□□□□ -0.07
CASC3-208ENST00000583649 POLLQ9UGP5 575 aa14.62□□□□□ -0.07
CASC3-208ENST00000583649 ANKRD36CQ5JPF3 1778 aa14.61□□□□□ -0.07
CASC3-208ENST00000583649 MANSC4A6NHS7 340 aaPredicted RBP14.61□□□□□ -0.07
CASC3-208ENST00000583649 GPSM2P81274 684 aa14.61□□□□□ -0.07
CASC3-208ENST00000583649 NBPF11Q86T75 865 aa14.61□□□□□ -0.07
CASC3-208ENST00000583649 TBC1D16Q8TBP0 767 aa14.61□□□□□ -0.07
CASC3-208ENST00000583649 DDX60Q8IY21 1712 aaKnown RBP14.61□□□□□ -0.07
CASC3-208ENST00000583649 RTL9Q8NET4 1388 aa14.6□□□□□ -0.07
CASC3-208ENST00000583649 POLR2AP24928 1970 aaKnown RBP14.6□□□□□ -0.07
CASC3-208ENST00000583649 POTEFA5A3E0 1075 aa14.6□□□□□ -0.07
CASC3-208ENST00000583649 DLL1O00548 723 aa14.6□□□□□ -0.07
CASC3-208ENST00000583649 MMP14P50281 582 aa14.6□□□□□ -0.07
CASC3-208ENST00000583649 MKRN3Q13064 507 aaKnown RBP14.6□□□□□ -0.07
CASC3-208ENST00000583649 KCNQ5Q9NR82 932 aa14.6□□□□□ -0.07
CASC3-208ENST00000583649 GGA1Q9UJY5 639 aa14.6□□□□□ -0.07
CASC3-208ENST00000583649 ZNF609O15014 1411 aa14.59□□□□□ -0.07
CASC3-208ENST00000583649 UFL1O94874 794 aa14.59□□□□□ -0.07
CASC3-208ENST00000583649 RPS8P62241 208 aaKnown RBP14.59□□□□□ -0.07
CASC3-208ENST00000583649 AIMP1Q12904 312 aaKnown RBP14.59□□□□□ -0.07
CASC3-208ENST00000583649 SF3B3Q15393 1217 aaKnown RBP14.59□□□□□ -0.07
CASC3-208ENST00000583649 COPS6Q7L5N1 327 aa14.59□□□□□ -0.07
CASC3-208ENST00000583649 OTOP1Q7RTM1 612 aa14.59□□□□□ -0.07
CASC3-208ENST00000583649 TSPYL4Q9UJ04 414 aa14.59□□□□□ -0.07
CASC3-208ENST00000583649 COLQQ9Y215 455 aaPredicted RBP14.59□□□□□ -0.07
CASC3-208ENST00000583649 ASTN2O75129 1339 aaPredicted RBP14.59□□□□□ -0.07
CASC3-208ENST00000583649 DUOX1Q9NRD9 1551 aa14.59□□□□□ -0.07
CASC3-208ENST00000583649 USP17L3A6NCW0 530 aa14.58□□□□□ -0.08
CASC3-208ENST00000583649 USP17L4A6NCW7 530 aa14.58□□□□□ -0.08
CASC3-208ENST00000583649 MOB2Q70IA6 237 aa14.58□□□□□ -0.08
CASC3-208ENST00000583649 USP17L1Q7RTZ2 530 aa14.58□□□□□ -0.08
CASC3-208ENST00000583649 PODNQ7Z5L7 613 aa14.58□□□□□ -0.08
CASC3-208ENST00000583649 SLC17A8Q8NDX2 589 aa14.58□□□□□ -0.08
CASC3-208ENST00000583649 CELF1Q92879 486 aaKnown RBP14.58□□□□□ -0.08
CASC3-208ENST00000583649 THUMPD2Q9BTF0 503 aaKnown RBP14.58□□□□□ -0.08
CASC3-208ENST00000583649 PODXL2Q9NZ53 605 aa14.58□□□□□ -0.08
CASC3-208ENST00000583649 ARMC5Q96C12 935 aa14.57□□□□□ -0.08
CASC3-208ENST00000583649 SLC10A4Q96EP9 437 aa14.57□□□□□ -0.08
CASC3-208ENST00000583649 EFCC1Q9HA90 598 aa14.57□□□□□ -0.08
CASC3-208ENST00000583649 PTPN22Q9Y2R2 807 aa14.57□□□□□ -0.08
CASC3-208ENST00000583649 LRRC37AA6NMS7 1700 aa14.56□□□□□ -0.08
CASC3-208ENST00000583649 ZBTB48P10074 688 aaPredicted RBP14.56□□□□□ -0.08
CASC3-208ENST00000583649 EN2P19622 333 aaPredicted RBP14.56□□□□□ -0.08
CASC3-208ENST00000583649 SLC4A8Q2Y0W8 1093 aa14.56□□□□□ -0.08
CASC3-208ENST00000583649 SPRYD7Q5W111 196 aa14.56□□□□□ -0.08
CASC3-208ENST00000583649 IFNL1Q8IU54 200 aa14.56□□□□□ -0.08
CASC3-208ENST00000583649 APOBEC3FQ8IUX4 373 aaKnown RBP14.56□□□□□ -0.08
CASC3-208ENST00000583649 BABAM1Q9NWV8 329 aa14.56□□□□□ -0.08
CASC3-208ENST00000583649 MYO3BQ8WXR4 1341 aa14.56□□□□□ -0.08
CASC3-208ENST00000583649 MAPK8IP3Q9UPT6 1336 aa14.56□□□□□ -0.08
CASC3-208ENST00000583649 TRIM26Q12899 539 aaPredicted RBP14.55□□□□□ -0.08
CASC3-208ENST00000583649 XAGE3Q8WTP9 111 aa14.55□□□□□ -0.08
CASC3-208ENST00000583649 KDM3BQ7LBC6 1761 aa14.55□□□□□ -0.08
CASC3-208ENST00000583649 UNCXA6NJT0 531 aa14.54□□□□□ -0.08
CASC3-208ENST00000583649 PPP1R12BO60237 982 aaPredicted RBP14.54□□□□□ -0.08
CASC3-208ENST00000583649 PTPN12Q05209 780 aaKnown RBP14.54□□□□□ -0.08
CASC3-208ENST00000583649 PDIA6Q15084 440 aa14.54□□□□□ -0.08
CASC3-208ENST00000583649 NFE2L2Q16236 605 aa14.54□□□□□ -0.08
CASC3-208ENST00000583649 PRAMEF18Q5VWM3 479 aa14.54□□□□□ -0.08
CASC3-208ENST00000583649 LRP10Q7Z4F1 713 aa14.54□□□□□ -0.08
CASC3-208ENST00000583649 FAM89AQ96GI7 184 aa14.54□□□□□ -0.08
CASC3-208ENST00000583649 ANGEL1Q9UNK9 670 aaKnown RBP14.54□□□□□ -0.08
CASC3-208ENST00000583649 LAMB2P55268 1798 aa14.53□□□□□ -0.08
CASC3-208ENST00000583649 WDHD1O75717 1129 aaPredicted RBP14.53□□□□□ -0.08
CASC3-208ENST00000583649 SP3Q02447 781 aa14.53□□□□□ -0.08
CASC3-208ENST00000583649 SLC9C1Q4G0N8 1177 aa14.53□□□□□ -0.08
CASC3-208ENST00000583649 PLBD2Q8NHP8 589 aa14.53□□□□□ -0.08
CASC3-208ENST00000583649 PCGF6Q9BYE7 350 aa14.53□□□□□ -0.08
CASC3-208ENST00000583649 XDHP47989 1333 aa14.52□□□□□ -0.08
CASC3-208ENST00000583649 IRS4O14654 1257 aaPredicted RBP14.52□□□□□ -0.09
CASC3-208ENST00000583649 ATP2B4P23634 1241 aa14.52□□□□□ -0.09
CASC3-208ENST00000583649 PRKG1Q13976 671 aa14.52□□□□□ -0.09
CASC3-208ENST00000583649 NBPF9Q3BBW0 867 aa14.52□□□□□ -0.09
CASC3-208ENST00000583649 CCDC152Q4G0S7 254 aa14.52□□□□□ -0.09
CASC3-208ENST00000583649 ANKRD13DQ6ZTN6 518 aa14.52□□□□□ -0.09
CASC3-208ENST00000583649 GMLQ99445 158 aa14.52□□□□□ -0.09
CASC3-208ENST00000583649 R3HDMLQ9H3Y0 253 aa14.52□□□□□ -0.09
CASC3-208ENST00000583649 WNT10BO00744 389 aa14.51□□□□□ -0.09
CASC3-208ENST00000583649 ANXA1P04083 346 aa14.51□□□□□ -0.09
CASC3-208ENST00000583649 PPP2R1AP30153 589 aa14.51□□□□□ -0.09
CASC3-208ENST00000583649 PROSER3Q2NL68 480 aa14.51□□□□□ -0.09
CASC3-208ENST00000583649 LDLRAD1Q5T700 205 aa14.51□□□□□ -0.09
CASC3-208ENST00000583649 CD99L2Q8TCZ2 262 aa14.51□□□□□ -0.09
CASC3-208ENST00000583649 FBXW7Q969H0 707 aa14.51□□□□□ -0.09
CASC3-208ENST00000583649 H0YGN5 161 aa14.5□□□□□ -0.09
CASC3-208ENST00000583649 LMOD3Q0VAK6 560 aa14.5□□□□□ -0.09
CASC3-208ENST00000583649 SUPT20HL1Q3ZLR7 823 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms