RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 IGHMBP2P38935 993 aaKnown RBP20.23■□□□□ 0.83
CDK5RAP3-228ENST00000583363 RPS8P62241 208 aaKnown RBP20.23■□□□□ 0.83
CDK5RAP3-228ENST00000583363 NUCB1Q02818 461 aa20.23■□□□□ 0.83
CDK5RAP3-228ENST00000583363 LRRC24Q50LG9 513 aa20.23■□□□□ 0.83
CDK5RAP3-228ENST00000583363 ANKRD45Q5TZF3 282 aa20.23■□□□□ 0.83
CDK5RAP3-228ENST00000583363 LDHAL6AQ6ZMR3 332 aa20.23■□□□□ 0.83
CDK5RAP3-228ENST00000583363 CELF1Q92879 486 aaKnown RBP20.23■□□□□ 0.83
CDK5RAP3-228ENST00000583363 CRAMP1Q96RY5 1269 aa20.23■□□□□ 0.83
CDK5RAP3-228ENST00000583363 RIPOR2Q9Y4F9 1068 aa20.23■□□□□ 0.83
CDK5RAP3-228ENST00000583363 ANKRD31Q8N7Z5 1873 aa20.22■□□□□ 0.83
CDK5RAP3-228ENST00000583363 SASH1O94885 1247 aa20.22■□□□□ 0.83
CDK5RAP3-228ENST00000583363 NPR1P16066 1061 aa20.22■□□□□ 0.83
CDK5RAP3-228ENST00000583363 CHRNA5P30532 468 aa20.22■□□□□ 0.83
CDK5RAP3-228ENST00000583363 IL15P40933 162 aaPredicted RBP20.22■□□□□ 0.83
CDK5RAP3-228ENST00000583363 OS9Q13438 667 aaPredicted RBP20.22■□□□□ 0.83
CDK5RAP3-228ENST00000583363 DALRD3Q5D0E6 543 aaKnown RBP20.22■□□□□ 0.83
CDK5RAP3-228ENST00000583363 C2CD5Q86YS7 1000 aa20.22■□□□□ 0.83
CDK5RAP3-228ENST00000583363 ERC1Q8IUD2 1116 aa20.22■□□□□ 0.83
CDK5RAP3-228ENST00000583363 ANKRD18AQ8IVF6 992 aa20.22■□□□□ 0.83
CDK5RAP3-228ENST00000583363 MPHOSPH8Q99549 860 aa20.22■□□□□ 0.83
CDK5RAP3-228ENST00000583363 SBF1O95248 1867 aa20.22■□□□□ 0.83
CDK5RAP3-228ENST00000583363 H0YIN7 160 aa20.21■□□□□ 0.83
CDK5RAP3-228ENST00000583363 APBB1O00213 710 aa20.21■□□□□ 0.83
CDK5RAP3-228ENST00000583363 GRAPQ13588 217 aa20.21■□□□□ 0.83
CDK5RAP3-228ENST00000583363 GRAPLQ8TC17 118 aaPredicted RBP20.21■□□□□ 0.83
CDK5RAP3-228ENST00000583363 RHPN1Q8TCX5 695 aa20.21■□□□□ 0.83
CDK5RAP3-228ENST00000583363 KIF1BPQ96EK5 621 aa20.21■□□□□ 0.83
CDK5RAP3-228ENST00000583363 MASTLQ96GX5 879 aa20.21■□□□□ 0.83
CDK5RAP3-228ENST00000583363 BSDC1Q9NW68 430 aaPredicted RBP20.21■□□□□ 0.83
CDK5RAP3-228ENST00000583363 WDR90Q96KV7 1748 aa20.21■□□□□ 0.83
CDK5RAP3-228ENST00000583363 LRRCC1Q9C099 1032 aa20.2■□□□□ 0.82
CDK5RAP3-228ENST00000583363 CNNM1Q9NRU3 951 aa20.2■□□□□ 0.82
CDK5RAP3-228ENST00000583363 SMARCA5O60264 1052 aaPredicted RBP20.19■□□□□ 0.82
CDK5RAP3-228ENST00000583363 BBOX1O75936 387 aa20.19■□□□□ 0.82
CDK5RAP3-228ENST00000583363 ALDH1B1P30837 517 aa20.19■□□□□ 0.82
CDK5RAP3-228ENST00000583363 STYK1Q6J9G0 422 aa20.19■□□□□ 0.82
CDK5RAP3-228ENST00000583363 CHD1LQ86WJ1 897 aa20.19■□□□□ 0.82
CDK5RAP3-228ENST00000583363 RBM46Q8TBY0 533 aaKnown RBP20.19■□□□□ 0.82
CDK5RAP3-228ENST00000583363 RNF181Q9P0P0 153 aa20.18■□□□□ 0.82
CDK5RAP3-228ENST00000583363 TAF1P21675 1872 aa20.18■□□□□ 0.82
CDK5RAP3-228ENST00000583363 TFCP2Q12800 502 aa20.17■□□□□ 0.82
CDK5RAP3-228ENST00000583363 ZNF622Q969S3 477 aaKnown RBP eCLIP20.17■□□□□ 0.828e-13■■□□□ 12.8
CDK5RAP3-228ENST00000583363 CEP126Q9P2H0 1117 aa20.17■□□□□ 0.82
CDK5RAP3-228ENST00000583363 ZBTB47Q9UFB7 747 aaPredicted RBP20.17■□□□□ 0.82
CDK5RAP3-228ENST00000583363 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.17■□□□□ 0.82
CDK5RAP3-228ENST00000583363 COL4A1P02462 1669 aa20.16■□□□□ 0.82
CDK5RAP3-228ENST00000583363 HTRA3P83110 453 aa20.16■□□□□ 0.82
CDK5RAP3-228ENST00000583363 LNPKQ9C0E8 428 aa20.16■□□□□ 0.82
CDK5RAP3-228ENST00000583363 IL1RAPL2Q9NP60 686 aa20.16■□□□□ 0.82
CDK5RAP3-228ENST00000583363 MINPP1Q9UNW1 487 aa20.16■□□□□ 0.82
CDK5RAP3-228ENST00000583363 MROH5Q6ZUA9 1318 aa20.16■□□□□ 0.82
CDK5RAP3-228ENST00000583363 METTL24Q5JXM2 366 aa20.15■□□□□ 0.82
CDK5RAP3-228ENST00000583363 C16orf71Q8IYS4 520 aaPredicted RBP20.15■□□□□ 0.82
CDK5RAP3-228ENST00000583363 CNKSR1Q969H4 720 aa20.15■□□□□ 0.82
CDK5RAP3-228ENST00000583363 GPR108Q9NPR9 543 aa20.15■□□□□ 0.82
CDK5RAP3-228ENST00000583363 CHRNDQ07001 517 aa20.14■□□□□ 0.81
CDK5RAP3-228ENST00000583363 TMC4Q7Z404 712 aa20.14■□□□□ 0.81
CDK5RAP3-228ENST00000583363 CLASRPQ8N2M8 674 aaKnown RBP20.14■□□□□ 0.81
CDK5RAP3-228ENST00000583363 VGLL2Q8N8G2 317 aa20.14■□□□□ 0.81
CDK5RAP3-228ENST00000583363 RRAGCQ9HB90 399 aa20.14■□□□□ 0.81
CDK5RAP3-228ENST00000583363 DLEC1Q9Y238 1755 aa20.13■□□□□ 0.81
CDK5RAP3-228ENST00000583363 PDE8BO95263 885 aa20.13■□□□□ 0.81
CDK5RAP3-228ENST00000583363 PDE4AP27815 886 aa20.13■□□□□ 0.81
CDK5RAP3-228ENST00000583363 FSTL1Q12841 308 aa20.13■□□□□ 0.81
CDK5RAP3-228ENST00000583363 SP8Q8IXZ3 490 aa20.13■□□□□ 0.81
CDK5RAP3-228ENST00000583363 HELBQ8NG08 1087 aaPredicted RBP20.13■□□□□ 0.81
CDK5RAP3-228ENST00000583363 EAF2Q96CJ1 260 aaPredicted RBP20.13■□□□□ 0.81
CDK5RAP3-228ENST00000583363 RASSF7Q02833 373 aa20.12■□□□□ 0.81
CDK5RAP3-228ENST00000583363 TNNI3KQ59H18 835 aa20.12■□□□□ 0.81
CDK5RAP3-228ENST00000583363 ANKRD2Q9GZV1 360 aa20.12■□□□□ 0.81
CDK5RAP3-228ENST00000583363 AKAP2Q9Y2D5 859 aa20.12■□□□□ 0.81
CDK5RAP3-228ENST00000583363 FPGT-TNNI3KV9GXZ4 949 aa20.12■□□□□ 0.81
CDK5RAP3-228ENST00000583363 PPEF1O14829 653 aaPredicted RBP20.11■□□□□ 0.81
CDK5RAP3-228ENST00000583363 TAF5LO75529 589 aa20.11■□□□□ 0.81
CDK5RAP3-228ENST00000583363 SKAP1Q86WV1 359 aa20.11■□□□□ 0.81
CDK5RAP3-228ENST00000583363 BCL11AQ9H165 835 aa20.11■□□□□ 0.81
CDK5RAP3-228ENST00000583363 ATP6V0A2Q9Y487 856 aa20.11■□□□□ 0.81
CDK5RAP3-228ENST00000583363 COL11A2P13942 1736 aaPredicted RBP20.1■□□□□ 0.81
CDK5RAP3-228ENST00000583363 PRELPP51888 382 aa20.1■□□□□ 0.81
CDK5RAP3-228ENST00000583363 TIMM10P62072 90 aa20.1■□□□□ 0.81
CDK5RAP3-228ENST00000583363 AACSQ86V21 672 aa20.1■□□□□ 0.81
CDK5RAP3-228ENST00000583363 TTLL6Q8N841 843 aa20.1■□□□□ 0.81
CDK5RAP3-228ENST00000583363 KLRG1Q96E93 195 aa20.1■□□□□ 0.81
CDK5RAP3-228ENST00000583363 CCDC88AQ3V6T2 1871 aa20.09■□□□□ 0.81
CDK5RAP3-228ENST00000583363 FGFR2P21802 821 aa20.09■□□□□ 0.81
CDK5RAP3-228ENST00000583363 PRPF40BQ6NWY9 871 aaKnown RBP20.09■□□□□ 0.81
CDK5RAP3-228ENST00000583363 OTUD7AQ8TE49 926 aaPredicted RBP20.09■□□□□ 0.81
CDK5RAP3-228ENST00000583363 C7orf43Q8WVR3 580 aa20.09■□□□□ 0.81
CDK5RAP3-228ENST00000583363 CCDC8Q9H0W5 538 aaPredicted RBP20.09■□□□□ 0.81
CDK5RAP3-228ENST00000583363 A0A1B0GUL7 405 aa20.08■□□□□ 0.81
CDK5RAP3-228ENST00000583363 IFIT2P09913 472 aaKnown RBP20.08■□□□□ 0.81
CDK5RAP3-228ENST00000583363 GPSM2P81274 684 aa20.08■□□□□ 0.81
CDK5RAP3-228ENST00000583363 UBE4AQ14139 1066 aa20.08■□□□□ 0.81
CDK5RAP3-228ENST00000583363 PUM3Q15397 648 aaKnown RBP20.08■□□□□ 0.81
CDK5RAP3-228ENST00000583363 SLC51AQ86UW1 340 aa20.08■□□□□ 0.81
CDK5RAP3-228ENST00000583363 PLEKHM2Q8IWE5 1019 aa20.08■□□□□ 0.81
CDK5RAP3-228ENST00000583363 SPEF2Q9C093 1822 aa20.08■□□□□ 0.8
CDK5RAP3-228ENST00000583363 SALL3Q9BXA9 1300 aa20.07■□□□□ 0.8
CDK5RAP3-228ENST00000583363 SNAP23O00161 211 aa20.07■□□□□ 0.8
CDK5RAP3-228ENST00000583363 ATP2B3Q16720 1220 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 1606.8 ms